SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/32735
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2821 O_BomaASG1253_5prime_partial:A_BomaASG_c8988_g1_i2
132bp
2822 O_BomaASG12540_complete:A_BomaASG_c29776_g1_i3
187bp
2823 O_BomaASG12541_complete:A_BomaASG_c29776_g1_i3
133bp
2824 O_BomaASG12542_complete:A_BomaASG_c29776_g1_i3
116bp
2825 O_BomaASG12543_complete:A_BomaASG_c29776_g1_i4
1363bp
uncharacterized_protein_LOC101738072_isoform_X1_[Bombyx_mori]
2826 O_BomaASG12544_complete:A_BomaASG_c29776_g1_i4
187bp
2827 O_BomaASG12545_complete:A_BomaASG_c29776_g1_i4
133bp
2828 O_BomaASG12546_complete:A_BomaASG_c29776_g1_i4
120bp
uncharacterized_protein_LOC110373944_isoform_X4_[Helicoverpa_armigera]
2829 O_BomaASG12547_complete:A_BomaASG_c29776_g1_i4
116bp
2830 O_BomaASG12548_5prime_partial:A_BomaASG_c29777_g1_i1
129bp
THUMP_domain-containing_protein_1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
2831 O_BomaASG12549_complete:A_BomaASG_c29777_g1_i2
292bp
THUMP_domain-containing_protein_1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
2832 O_BomaASG1254_3prime_partial:A_BomaASG_c8989_g1_i1
125bp
target_of_rapamycin_isoform_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0001030 F RNA polymerase III type 1 promoter sequence-specific DNA binding
GO:0001031 F RNA polymerase III type 2 promoter sequence-specific DNA binding
GO:0001032 F RNA polymerase III type 3 promoter sequence-specific DNA binding
GO:0001156 F TFIIIC-class transcription factor complex binding
GO:0001933 P negative regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003007 P heart morphogenesis
GO:0003179 P heart valve morphogenesis
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005979 P regulation of glycogen biosynthetic process
GO:0006109 P regulation of carbohydrate metabolic process
GO:0006112 P energy reserve metabolic process
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006950 P response to stress
GO:0007281 P germ cell development
GO:0007420 P brain development
GO:0007569 P cell aging
GO:0007616 P long-term memory
GO:0008144 F obsolete drug binding
GO:0008542 P visual learning
GO:0009791 P post-embryonic development
GO:0010507 P negative regulation of autophagy
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010628 P positive regulation of gene expression
GO:0010831 P positive regulation of myotube differentiation
GO:0010942 P positive regulation of cell death
GO:0010976 P positive regulation of neuron projection development
GO:0012505 C endomembrane system
GO:0014042 P positive regulation of neuron maturation
GO:0014736 P negative regulation of muscle atrophy
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0016242 P negative regulation of macroautophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0021510 P spinal cord development
GO:0030030 P cell projection organization
GO:0030425 C dendrite
GO:0030838 P positive regulation of actin filament polymerization
GO:0031397 P negative regulation of protein ubiquitination
GO:0031529 P ruffle organization
GO:0031641 P regulation of myelination
GO:0031669 P cellular response to nutrient levels
GO:0031929 P TOR signaling
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0031998 P regulation of fatty acid beta-oxidation
GO:0032095 P regulation of response to food
GO:0032868 P response to insulin
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032991 C protein-containing complex
GO:0035176 P social behavior
GO:0035264 P multicellular organism growth
GO:0042060 P wound healing
GO:0042220 P response to cocaine
GO:0043022 F ribosome binding
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043200 P response to amino acid
GO:0043278 P response to morphine
GO:0043610 P regulation of carbohydrate utilization
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0045670 P regulation of osteoclast differentiation
GO:0045727 P positive regulation of translation
GO:0045792 P negative regulation of cell size
GO:0045859 P regulation of protein kinase activity
GO:0045945 P positive regulation of transcription by RNA polymerase III
GO:0046777 P protein autophosphorylation
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0048255 P mRNA stabilization
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0048714 P positive regulation of oligodendrocyte differentiation
GO:0048738 P cardiac muscle tissue development
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0050769 P positive regulation of neurogenesis
GO:0050882 P voluntary musculoskeletal movement
GO:0051219 F phosphoprotein binding
GO:0051496 P positive regulation of stress fiber assembly
GO:0051534 P negative regulation of calcineurin-NFAT signaling cascade
GO:0051896 P regulation of protein kinase B signaling
GO:0051897 P positive regulation of protein kinase B signaling
GO:0055006 P cardiac cell development
GO:0055013 P cardiac muscle cell development
GO:0060048 P cardiac muscle contraction
GO:0060135 P maternal process involved in female pregnancy
GO:0060252 P positive regulation of glial cell proliferation
GO:0060999 P positive regulation of dendritic spine development
GO:0061051 P positive regulation of cell growth involved in cardiac muscle cell development
GO:0071456 P cellular response to hypoxia
GO:0090335 P regulation of brown fat cell differentiation
GO:0090559 P regulation of membrane permeability
GO:1901216 P positive regulation of neuron death
GO:1901838 P positive regulation of transcription of nucleolar large rRNA by RNA polymerase I
GO:1904000 P positive regulation of eating behavior
GO:1904056 P positive regulation of cholangiocyte proliferation
GO:1904058 P positive regulation of sensory perception of pain
GO:1904193 P negative regulation of cholangiocyte apoptotic process
GO:1904197 P positive regulation of granulosa cell proliferation
GO:1904206 P positive regulation of skeletal muscle hypertrophy
GO:1904213 P negative regulation of iodide transmembrane transport
2833 O_BomaASG12550_complete:A_BomaASG_c29778_g1_i1
439bp
LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
2834 O_BomaASG12551_complete:A_BomaASG_c29780_g1_i1
373bp
zinc_finger_protein_629_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007601 P visual perception
GO:0008407 P chaeta morphogenesis
GO:0008594 P photoreceptor cell morphogenesis
GO:0016360 P sensory organ precursor cell fate determination
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0043066 P negative regulation of apoptotic process
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045464 P R8 cell fate specification
GO:0045465 P R8 cell differentiation
GO:0045872 P obsolete positive regulation of rhodopsin gene expression
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046530 P photoreceptor cell differentiation
GO:0046872 F metal ion binding
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0050896 P response to stimulus
2835 O_BomaASG12552_complete:A_BomaASG_c29781_g1_i1
184bp
ubiquitin-conjugating_enzyme_E2_S_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0007049 P cell cycle
GO:0010458 P exit from mitosis
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0051301 P cell division
2836 O_BomaASG12553_complete:A_BomaASG_c29781_g1_i1
162bp
2837 O_BomaASG12554_complete:A_BomaASG_c29781_g1_i1
112bp
2838 O_BomaASG12555_5prime_partial:A_BomaASG_c29782_g1_i1
284bp
verprolin_isoform_X3_[Bombyx_mori]
2839 O_BomaASG12556_complete:A_BomaASG_c29782_g1_i1
111bp
2840 O_BomaASG12557_complete:A_BomaASG_c29783_g1_i1
704bp
histone-lysine_N-methyltransferase_KMT5B_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005720 C heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034770 P histone H4-K20 methylation
GO:0034772 P histone H4-K20 dimethylation
GO:0034773 P histone H4-K20 trimethylation
GO:0040029 P regulation of gene expression, epigenetic
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
2841 O_BomaASG12558_5prime_partial:A_BomaASG_c29783_g1_i2
223bp
histone-lysine_N-methyltransferase_KMT5B_isoform_X2_[Bombyx_mori]
2842 O_BomaASG12559_5prime_partial:A_BomaASG_c29788_g1_i1
373bp
septin-7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0000915 P actomyosin contractile ring assembly
GO:0003779 F actin binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005940 C septin ring
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007349 P cellularization
GO:0008017 F microtubule binding
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0031105 C septin complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032154 C cleavage furrow
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045171 C intercellular bridge
GO:0045172 C germline ring canal
GO:0051301 P cell division
GO:0070938 C contractile ring
2843 O_BomaASG1255_internal:A_BomaASG_c8992_g1_i1
101bp
PREDICTED:_uncharacterized_protein_LOC106107795_[Papilio_polytes]
GO:0002121 P inter-male aggressive behavior
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045179 C apical cortex
GO:0046580 P negative regulation of Ras protein signal transduction
2844 O_BomaASG12560_complete:A_BomaASG_c29788_g1_i1
209bp
hypothetical_protein_VP1G_10488_[Valsa_mali_var._pyri]
2845 O_BomaASG12561_3prime_partial:A_BomaASG_c29788_g1_i1
117bp
hypothetical_protein_X975_18388,_partial_[Stegodyphus_mimosarum]
2846 O_BomaASG12562_complete:A_BomaASG_c29789_g1_i1
316bp
probable_39S_ribosomal_protein_L45,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
2847 O_BomaASG12563_5prime_partial:A_BomaASG_c29789_g1_i1
134bp
2848 O_BomaASG12564_complete:A_BomaASG_c29789_g1_i1
128bp
conserved_hypothetical_protein_[Trichinella_spiralis]
2849 O_BomaASG12565_complete:A_BomaASG_c29790_g1_i1
185bp
PREDICTED:_zinc_finger_protein_271-like_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0046872 F metal ion binding
GO:0060041 P retina development in camera-type eye
2850 O_BomaASG12566_5prime_partial:A_BomaASG_c29791_g1_i1
248bp
zinc_finger_protein_OZF_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
previous next from show/32735

- SilkBase 1999-2023 -