Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
2491	O_BomaASG12242_complete:A_BomaASG_c29568_g1_i1 110bp
2492	O_BomaASG12243_complete:A_BomaASG_c29568_g1_i2 339bp		actin-like_protein_6A_[Bombyx_mori]	GO:0000790 C chromatin GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0003407 P neural retina development GO:0003682 F chromatin binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005886 C plasma membrane GO:0006281 P DNA repair GO:0006310 P DNA recombination GO:0006338 P chromatin remodeling GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006974 P cellular response to DNA damage stimulus GO:0007399 P nervous system development GO:0016514 C SWI/SNF complex GO:0016568 P chromatin organization GO:0021510 P spinal cord development GO:0031011 C Ino80 complex GO:0031492 F nucleosomal DNA binding GO:0035267 C NuA4 histone acetyltransferase complex GO:0040008 P regulation of growth GO:0043044 P chromatin remodeling GO:0043234 C protein-containing complex GO:0043967 P histone H4 acetylation GO:0043968 P histone H2A acetylation GO:0071564 C npBAF complex GO:0090544 C SWI/SNF superfamily-type complex GO:1903146 P regulation of autophagy of mitochondrion GO:1903955 P positive regulation of protein targeting to mitochondrion
2493	O_BomaASG12244_complete:A_BomaASG_c29568_g1_i2 111bp
2494	O_BomaASG12245_complete:A_BomaASG_c29568_g1_i2 110bp
2495	O_BomaASG12246_5prime_partial:A_BomaASG_c29570_g1_i1 444bp		clustered_mitochondria_protein_homolog_isoform_X1_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0007005 P mitochondrion organization GO:0048312 P intracellular distribution of mitochondria
2496	O_BomaASG12247_5prime_partial:A_BomaASG_c29570_g1_i1 241bp
2497	O_BomaASG12248_5prime_partial:A_BomaASG_c29570_g1_i1 130bp
2498	O_BomaASG12249_internal:A_BomaASG_c29570_g1_i2 236bp
2499	O_BomaASG1224_internal:A_BomaASG_c8801_g1_i1 106bp
2500	O_BomaASG12250_5prime_partial:A_BomaASG_c29570_g1_i2 217bp		clustered_mitochondria_protein_homolog_isoform_X5_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0007005 P mitochondrion organization GO:0048312 P intracellular distribution of mitochondria
2501	O_BomaASG12251_5prime_partial:A_BomaASG_c29570_g1_i2 130bp
2502	O_BomaASG12252_internal:A_BomaASG_c29573_g1_i1 328bp		putative_uncharacterized_protein_DDB_G0282499_[Bombyx_mori]
2503	O_BomaASG12253_internal:A_BomaASG_c29578_g2_i1 241bp		zinc_finger_protein_239-like,_partial_[Bombyx_mori]	GO:0003674 F molecular_function GO:0003676 F nucleic acid binding GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008150 P biological_process GO:0046872 F metal ion binding
2504	O_BomaASG12254_3prime_partial:A_BomaASG_c29579_g1_i1 331bp		dual_specificity_protein_kinase_TTK_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004712 F protein serine/threonine/tyrosine kinase activity GO:0005524 F ATP binding GO:0006468 P protein phosphorylation GO:0007093 P mitotic cell cycle checkpoint signaling GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0051304 P chromosome separation
2505	O_BomaASG12255_3prime_partial:A_BomaASG_c29580_g1_i1 702bp		serine/threonine-protein_kinase_tousled-like_2_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity
2506	O_BomaASG12256_3prime_partial:A_BomaASG_c29580_g1_i2 757bp		serine/threonine-protein_kinase_tousled-like_2_isoform_X4_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity
2507	O_BomaASG12257_3prime_partial:A_BomaASG_c29580_g1_i3 726bp		serine/threonine-protein_kinase_tousled-like_2_isoform_X6_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity
2508	O_BomaASG12258_3prime_partial:A_BomaASG_c29580_g1_i4 773bp		serine/threonine-protein_kinase_tousled-like_2_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity
2509	O_BomaASG12259_complete:A_BomaASG_c29580_g1_i4 116bp
2510	O_BomaASG1225_internal:A_BomaASG_c8822_g1_i1 99bp		furin-like_protease_2_[Bombyx_mori]	GO:0004252 F serine-type endopeptidase activity GO:0005886 C plasma membrane GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0008236 F serine-type peptidase activity GO:0010906 P regulation of glucose metabolic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016485 P protein processing GO:0016787 F hydrolase activity GO:0051048 P negative regulation of secretion
2511	O_BomaASG12260_3prime_partial:A_BomaASG_c29580_g1_i5 739bp		serine/threonine-protein_kinase_tousled-like_2_isoform_X9_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity
2512	O_BomaASG12261_3prime_partial:A_BomaASG_c29580_g1_i6 755bp		serine/threonine-protein_kinase_tousled-like_2_isoform_X6_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity
2513	O_BomaASG12262_3prime_partial:A_BomaASG_c29580_g1_i7 773bp		serine/threonine-protein_kinase_tousled-like_2_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity
2514	O_BomaASG12263_complete:A_BomaASG_c29580_g1_i7 116bp
2515	O_BomaASG12264_3prime_partial:A_BomaASG_c29580_g1_i8 744bp		serine/threonine-protein_kinase_tousled-like_2_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0006468 P protein phosphorylation GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity
2516	O_BomaASG12265_internal:A_BomaASG_c29580_g1_i9 425bp		serine/threonine-protein_kinase_tousled-like_2_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0001672 P regulation of chromatin assembly or disassembly GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005882 C intermediate filament GO:0006468 P protein phosphorylation GO:0006974 P cellular response to DNA damage stimulus GO:0007049 P cell cycle GO:0007059 P chromosome segregation GO:0010507 P negative regulation of autophagy GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016568 P chromatin organization GO:0016740 F transferase activity GO:0018105 P peptidyl-serine phosphorylation GO:0030054 C cell junction GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0035556 P intracellular signal transduction GO:0048471 C perinuclear region of cytoplasm GO:0071480 P cellular response to gamma radiation
2517	O_BomaASG12266_internal:A_BomaASG_c29580_g1_i10 544bp		serine/threonine-protein_kinase_tousled-like_2_isoform_X9_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0001672 P regulation of chromatin assembly or disassembly GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0005882 C intermediate filament GO:0006468 P protein phosphorylation GO:0006974 P cellular response to DNA damage stimulus GO:0007049 P cell cycle GO:0007059 P chromosome segregation GO:0010507 P negative regulation of autophagy GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016568 P chromatin organization GO:0016740 F transferase activity GO:0018105 P peptidyl-serine phosphorylation GO:0030054 C cell junction GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0035556 P intracellular signal transduction GO:0048471 C perinuclear region of cytoplasm GO:0071480 P cellular response to gamma radiation
2518	O_BomaASG12267_internal:A_BomaASG_c29581_g1_i1 107bp		uncharacterized_protein_LOC101744677_[Bombyx_mori]
2519	O_BomaASG12268_3prime_partial:A_BomaASG_c29581_g1_i2 119bp		uncharacterized_protein_LOC101744677_[Bombyx_mori]
2520	O_BomaASG12269_5prime_partial:A_BomaASG_c29581_g2_i1 164bp