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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2341 O_BomaASG12107_internal:A_BomaASG_c29511_g1_i1
255bp
solute_carrier_family_25_member_40_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2342 O_BomaASG12108_3prime_partial:A_BomaASG_c29511_g2_i1
109bp
solute_carrier_family_25_member_40_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2343 O_BomaASG12109_complete:A_BomaASG_c29512_g1_i1
275bp
PQ-loop_repeat-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2344 O_BomaASG1210_internal:A_BomaASG_c8683_g1_i1
103bp
uncharacterized_protein_LOC101741470_[Bombyx_mori]
2345 O_BomaASG12110_3prime_partial:A_BomaASG_c29512_g1_i2
189bp
PQ-loop_repeat-containing_protein_1_isoform_X3_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2346 O_BomaASG12111_5prime_partial:A_BomaASG_c29516_g1_i1
149bp
chromosome_transmission_fidelity_protein_18_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0007049 P cell cycle
GO:0007131 P reciprocal meiotic recombination
GO:0007140 P male meiotic nuclear division
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:0051985 P negative regulation of chromosome segregation
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
2347 O_BomaASG12112_complete:A_BomaASG_c29517_g1_i1
212bp
heat_shock_protein_hsp23.7_precursor_[Bombyx_mori]
GO:0006497 P protein lipidation
GO:0007275 P multicellular organism development
GO:0010506 P regulation of autophagy
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
2348 O_BomaASG12113_complete:A_BomaASG_c29518_g1_i1
338bp
LOW_QUALITY_PROTEIN:_growth_hormone-regulated_TBC_protein_1-A_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
2349 O_BomaASG12114_3prime_partial:A_BomaASG_c29520_g1_i1
515bp
GDNF-inducible_zinc_finger_protein_1_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001206 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2350 O_BomaASG12115_complete:A_BomaASG_c29520_g1_i1
113bp
2351 O_BomaASG12116_3prime_partial:A_BomaASG_c29520_g1_i2
332bp
GDNF-inducible_zinc_finger_protein_1_isoform_X1_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2352 O_BomaASG12117_complete:A_BomaASG_c29520_g1_i2
115bp
GDNF-inducible_zinc_finger_protein_1_isoform_X2_[Bombyx_mori]
2353 O_BomaASG12118_complete:A_BomaASG_c29520_g1_i2
113bp
2354 O_BomaASG12119_complete:A_BomaASG_c29522_g1_i1
424bp
gastrula_zinc_finger_protein_XlCGF52.1_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2355 O_BomaASG1211_complete:A_BomaASG_c8711_g1_i1
238bp
uncharacterized_protein_LOC101741342_[Bombyx_mori]
2356 O_BomaASG12120_complete:A_BomaASG_c29522_g1_i2
371bp
gastrula_zinc_finger_protein_XlCGF52.1_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2357 O_BomaASG12121_3prime_partial:A_BomaASG_c29525_g2_i1
455bp
uncharacterized_protein_LOC101740889_[Bombyx_mori]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
2358 O_BomaASG12122_5prime_partial:A_BomaASG_c29525_g2_i1
112bp
2359 O_BomaASG12123_3prime_partial:A_BomaASG_c29525_g2_i2
455bp
uncharacterized_protein_LOC101740889_[Bombyx_mori]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
2360 O_BomaASG12124_5prime_partial:A_BomaASG_c29525_g2_i2
112bp
2361 O_BomaASG12125_3prime_partial:A_BomaASG_c29526_g1_i1
262bp
disco-interacting_protein_2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
2362 O_BomaASG12126_complete:A_BomaASG_c29526_g1_i1
130bp
2363 O_BomaASG12127_3prime_partial:A_BomaASG_c29526_g1_i2
235bp
disco-interacting_protein_2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
2364 O_BomaASG12128_complete:A_BomaASG_c29526_g1_i2
130bp
2365 O_BomaASG12129_3prime_partial:A_BomaASG_c29526_g1_i3
341bp
disco-interacting_protein_2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
2366 O_BomaASG1212_complete:A_BomaASG_c8711_g1_i1
118bp
2367 O_BomaASG12130_complete:A_BomaASG_c29526_g1_i3
134bp
2368 O_BomaASG12131_3prime_partial:A_BomaASG_c29527_g1_i2
238bp
uncharacterized_protein_LOC101741514_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:1902117 P positive regulation of organelle assembly
2369 O_BomaASG12132_5prime_partial:A_BomaASG_c29528_g1_i1
139bp
2370 O_BomaASG12133_complete:A_BomaASG_c29528_g1_i1
114bp
programmed_cell_death_protein_4_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007569 P cell aging
GO:0043508 P negative regulation of JUN kinase activity
GO:0045892 P negative regulation of transcription, DNA-templated
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