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Search ORF from Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

2191

O_BomaASG11973_internal:A_BomaASG_c29412_g1_i1

108bp

helicase_SEN1_isoform_X2_[Bombyx_mori]

2192

O_BomaASG11974_internal:A_BomaASG_c29412_g1_i2

285bp

helicase_SEN1_isoform_X2_[Bombyx_mori]

GO:0000151	C	ubiquitin ligase complex
GO:0000781	C	chromosome, telomeric region
GO:0003682	F	chromatin binding
GO:0004842	F	ubiquitin-protein transferase activity
GO:0005634	C	nucleus
GO:0006281	P	DNA repair
GO:0006302	P	double-strand break repair
GO:0006303	P	double-strand break repair via nonhomologous end joining
GO:0006511	P	ubiquitin-dependent protein catabolic process
GO:0006974	P	cellular response to DNA damage stimulus
GO:0007286	P	spermatid development
GO:0008270	F	zinc ion binding
GO:0010212	P	response to ionizing radiation
GO:0016567	P	protein ubiquitination
GO:0016568	P	chromatin organization
GO:0016874	F	ligase activity
GO:0033522	P	histone H2A ubiquitination
GO:0033523	P	histone H2B ubiquitination
GO:0034244	P	negative regulation of transcription elongation from RNA polymerase II promoter
GO:0035861	C	site of double-strand break
GO:0042393	F	histone binding
GO:0042803	F	protein homodimerization activity
GO:0043486	P	histone exchange
GO:0045190	P	isotype switching
GO:0045739	P	positive regulation of DNA repair
GO:0046872	F	metal ion binding
GO:0070534	P	protein K63-linked ubiquitination
GO:0070535	P	histone H2A K63-linked ubiquitination
GO:0070936	P	protein K48-linked ubiquitination

2193

O_BomaASG11975_complete:A_BomaASG_c29415_g1_i1

145bp

G10_protein_[Bombyx_mori]

GO:0005634

nucleus

2194

O_BomaASG11976_complete:A_BomaASG_c29417_g1_i1

376bp

ribonucleoside_diphosphate_reductase_small_subunit_[Bombyx_mori]

GO:0004748	F	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005971	C	ribonucleoside-diphosphate reductase complex
GO:0006260	P	DNA replication
GO:0006919	P	activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0009186	P	deoxyribonucleoside diphosphate metabolic process
GO:0009263	P	deoxyribonucleotide biosynthetic process
GO:0016491	F	oxidoreductase activity
GO:0022008	P	neurogenesis
GO:0046872	F	metal ion binding
GO:0055114	P	obsolete oxidation-reduction process

2195

O_BomaASG11977_5prime_partial:A_BomaASG_c29417_g1_i2

305bp

ribonucleoside_diphosphate_reductase_small_subunit_[Bombyx_mori]

GO:0004748	F	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005971	C	ribonucleoside-diphosphate reductase complex
GO:0006260	P	DNA replication
GO:0006919	P	activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0009186	P	deoxyribonucleoside diphosphate metabolic process
GO:0009263	P	deoxyribonucleotide biosynthetic process
GO:0016491	F	oxidoreductase activity
GO:0022008	P	neurogenesis
GO:0046872	F	metal ion binding
GO:0055114	P	obsolete oxidation-reduction process

2196

O_BomaASG11978_complete:A_BomaASG_c29418_g1_i1

637bp

LOW_QUALITY_PROTEIN:_tyrosine-protein_phosphatase_non-receptor_type_11-like_[Bombyx_mori]

GO:0000077	P	DNA damage checkpoint signaling
GO:0000187	P	obsolete activation of MAPK activity
GO:0004721	F	phosphoprotein phosphatase activity
GO:0004725	F	protein tyrosine phosphatase activity
GO:0004726	F	non-membrane spanning protein tyrosine phosphatase activity
GO:0005070	F	obsolete SH3/SH2 adaptor activity
GO:0005158	F	insulin receptor binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0006470	P	protein dephosphorylation
GO:0006629	P	lipid metabolic process
GO:0006641	P	triglyceride metabolic process
GO:0007173	P	epidermal growth factor receptor signaling pathway
GO:0007229	P	integrin-mediated signaling pathway
GO:0007409	P	axonogenesis
GO:0007420	P	brain development
GO:0007507	P	heart development
GO:0009755	P	hormone-mediated signaling pathway
GO:0009967	P	positive regulation of signal transduction
GO:0016311	P	dephosphorylation
GO:0016787	F	hydrolase activity
GO:0016791	F	phosphatase activity
GO:0019904	F	protein domain specific binding
GO:0021697	P	cerebellar cortex formation
GO:0030220	P	platelet formation
GO:0030971	F	receptor tyrosine kinase binding
GO:0031748	F	D1 dopamine receptor binding
GO:0032528	P	microvillus organization
GO:0033277	P	abortive mitotic cell cycle
GO:0033628	P	regulation of cell adhesion mediated by integrin
GO:0033629	P	negative regulation of cell adhesion mediated by integrin
GO:0035264	P	multicellular organism growth
GO:0035265	P	organ growth
GO:0035335	P	peptidyl-tyrosine dephosphorylation
GO:0035855	P	megakaryocyte development
GO:0036302	P	atrioventricular canal development
GO:0038127	P	ERBB signaling pathway
GO:0040014	P	regulation of multicellular organism growth
GO:0042445	P	hormone metabolic process
GO:0042593	P	glucose homeostasis
GO:0043234	C	protein-containing complex
GO:0043254	P	regulation of protein-containing complex assembly
GO:0043274	F	phospholipase binding
GO:0043560	F	insulin receptor substrate binding
GO:0045931	P	positive regulation of mitotic cell cycle
GO:0046676	P	negative regulation of insulin secretion
GO:0046825	P	regulation of protein export from nucleus
GO:0046887	P	positive regulation of hormone secretion
GO:0046888	P	negative regulation of hormone secretion
GO:0048008	P	platelet-derived growth factor receptor signaling pathway
GO:0048011	P	neurotrophin TRK receptor signaling pathway
GO:0048013	P	ephrin receptor signaling pathway
GO:0048609	P	multicellular organismal reproductive process
GO:0048806	P	genitalia development
GO:0048839	P	inner ear development
GO:0048873	P	homeostasis of number of cells within a tissue
GO:0051428	F	peptide hormone receptor binding
GO:0051463	P	negative regulation of cortisol secretion
GO:0060020	P	Bergmann glial cell differentiation
GO:0060125	P	negative regulation of growth hormone secretion
GO:0060325	P	face morphogenesis
GO:0061582	P	intestinal epithelial cell migration
GO:0070374	P	positive regulation of ERK1 and ERK2 cascade
GO:2001275	P	obsolete positive regulation of glucose import in response to insulin stimulus

2197

O_BomaASG11979_complete:A_BomaASG_c29418_g1_i1

114bp

2198

O_BomaASG1197_complete:A_BomaASG_c8524_g1_i1

153bp

hypothetical_protein_G7K_4999-t1_[Saitoella_complicata_NRRL_Y-17804]

2199

O_BomaASG11980_3prime_partial:A_BomaASG_c29419_g1_i1

277bp

TATA_box-binding_protein-like_protein_1_[Bombyx_mori]

GO:0003677	F	DNA binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006351	P	transcription, DNA-templated
GO:0006352	P	DNA-templated transcription, initiation
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006366	P	transcription by RNA polymerase II
GO:0007275	P	multicellular organism development
GO:0009790	P	embryo development

2200

O_BomaASG11981_complete:A_BomaASG_c29420_g1_i1

266bp

leucine_zipper_protein_[Bombyx_mori]

GO:0000151	C	ubiquitin ligase complex
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0008150	P	biological_process
GO:0031624	F	ubiquitin conjugating enzyme binding
GO:0032182	F	ubiquitin-like protein binding
GO:0045116	P	protein neddylation
GO:0051443	P	positive regulation of ubiquitin-protein transferase activity
GO:0097602	F	cullin family protein binding

2201

O_BomaASG11982_internal:A_BomaASG_c29421_g1_i2

271bp

LOW_QUALITY_PROTEIN:_protein_bark_beetle_[Bombyx_mori]

GO:0005044	F	scavenger receptor activity
GO:0005886	C	plasma membrane
GO:0005912	C	adherens junction
GO:0005918	C	septate junction
GO:0005923	C	bicellular tight junction
GO:0006898	P	receptor-mediated endocytosis
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030054	C	cell junction
GO:0030246	F	carbohydrate binding
GO:0034976	P	response to endoplasmic reticulum stress
GO:0035002	P	liquid clearance, open tracheal system
GO:0035159	P	regulation of tube length, open tracheal system
GO:0045217	P	cell-cell junction maintenance
GO:0061689	C	tricellular tight junction
GO:0090557	P	establishment of endothelial intestinal barrier
GO:1904274	P	tricellular tight junction assembly

2202

O_BomaASG11983_internal:A_BomaASG_c29421_g1_i3

522bp

LOW_QUALITY_PROTEIN:_protein_bark_beetle_[Bombyx_mori]

GO:0005044	F	scavenger receptor activity
GO:0005886	C	plasma membrane
GO:0005912	C	adherens junction
GO:0005918	C	septate junction
GO:0005923	C	bicellular tight junction
GO:0006898	P	receptor-mediated endocytosis
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030054	C	cell junction
GO:0030246	F	carbohydrate binding
GO:0034976	P	response to endoplasmic reticulum stress
GO:0035002	P	liquid clearance, open tracheal system
GO:0035159	P	regulation of tube length, open tracheal system
GO:0045217	P	cell-cell junction maintenance
GO:0061689	C	tricellular tight junction
GO:0090557	P	establishment of endothelial intestinal barrier
GO:1904274	P	tricellular tight junction assembly

2203

O_BomaASG11984_complete:A_BomaASG_c29422_g1_i1

299bp

LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101735915_[Bombyx_mori]

2204

O_BomaASG11985_5prime_partial:A_BomaASG_c29422_g1_i2

109bp

2205

O_BomaASG11986_complete:A_BomaASG_c29424_g1_i1

486bp

circumsporozoite_protein_[Bombyx_mori]

GO:0005515	F	protein binding
GO:0005654	C	nucleoplasm
GO:0005768	C	endosome
GO:0005794	C	Golgi apparatus
GO:0005802	C	trans-Golgi network
GO:0005829	C	cytosol
GO:0005886	C	plasma membrane
GO:0006895	P	Golgi to endosome transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030133	C	transport vesicle
GO:0030140	C	trans-Golgi network transport vesicle
GO:0032588	C	trans-Golgi network membrane

2206

O_BomaASG11987_5prime_partial:A_BomaASG_c29425_g1_i3

229bp

PRKR-interacting_protein_1_homolog_[Bombyx_mori]

GO:0005634	C	nucleus
GO:0005730	C	nucleolus

2207

O_BomaASG11988_5prime_partial:A_BomaASG_c29425_g1_i4

140bp

PRKR-interacting_protein_1_homolog_[Bombyx_mori]

GO:0005634	C	nucleus
GO:0005730	C	nucleolus

2208

O_BomaASG11989_5prime_partial:A_BomaASG_c29426_g2_i1

162bp

uncharacterized_protein_LOC101737964_[Bombyx_mori]

2209

O_BomaASG1198_complete:A_BomaASG_c8524_g1_i1

150bp

seminal_fluid_protein_[Nilaparvata_lugens]

GO:0005509	F	calcium ion binding
GO:0046872	F	metal ion binding

2210

O_BomaASG11990_5prime_partial:A_BomaASG_c29426_g2_i2

250bp

uncharacterized_protein_LOC101737964_[Bombyx_mori]

2211

O_BomaASG11991_5prime_partial:A_BomaASG_c29428_g2_i2

170bp

ATP-dependent_RNA_helicase_DHX36_isoform_X1_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0000781	C	chromosome, telomeric region
GO:0001047	F	core promoter sequence-specific DNA binding
GO:0001503	P	ossification
GO:0002151	F	G-quadruplex RNA binding
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003723	F	RNA binding
GO:0003725	F	double-stranded RNA binding
GO:0004004	F	RNA helicase activity
GO:0004386	F	helicase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005694	C	chromosome
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006396	P	RNA processing
GO:0008026	F	helicase activity
GO:0008094	F	ATP-dependent activity, acting on DNA
GO:0009615	P	response to virus
GO:0010501	P	RNA secondary structure unwinding
GO:0016787	F	hydrolase activity
GO:0032206	P	positive regulation of telomere maintenance
GO:0032481	P	positive regulation of type I interferon production
GO:0042826	F	histone deacetylase binding
GO:0043330	P	response to exogenous dsRNA
GO:0044212	F	transcription cis-regulatory region binding
GO:0044822	F	RNA binding
GO:0045944	P	positive regulation of transcription by RNA polymerase II
GO:0051880	F	G-quadruplex DNA binding
GO:0070062	C	extracellular exosome

2212

O_BomaASG11992_complete:A_BomaASG_c29431_g1_i2

373bp

SWI/SNF-related_matrix-associated_actin-dependent_regulator_of_chromatin_subfamily_B_member_1-A_isoform_X2_[Bombyx_mori]

GO:0000228	C	nuclear chromosome
GO:0003677	F	DNA binding
GO:0005634	C	nucleus
GO:0006281	P	DNA repair
GO:0006337	P	nucleosome disassembly
GO:0006338	P	chromatin remodeling
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006357	P	regulation of transcription by RNA polymerase II
GO:0008285	P	negative regulation of cell population proliferation
GO:0030154	P	cell differentiation
GO:0043044	P	chromatin remodeling
GO:0090544	C	SWI/SNF superfamily-type complex

2213

O_BomaASG11993_complete:A_BomaASG_c29431_g1_i3

401bp

SWI/SNF-related_matrix-associated_actin-dependent_regulator_of_chromatin_subfamily_B_member_1-A_isoform_X1_[Bombyx_mori]

GO:0000228	C	nuclear chromosome
GO:0003677	F	DNA binding
GO:0005634	C	nucleus
GO:0006281	P	DNA repair
GO:0006337	P	nucleosome disassembly
GO:0006338	P	chromatin remodeling
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006357	P	regulation of transcription by RNA polymerase II
GO:0008285	P	negative regulation of cell population proliferation
GO:0030154	P	cell differentiation
GO:0043044	P	chromatin remodeling
GO:0090544	C	SWI/SNF superfamily-type complex

2214

O_BomaASG11994_5prime_partial:A_BomaASG_c29433_g1_i1

120bp

uncharacterized_protein_LOC101742880_isoform_X1_[Bombyx_mori]

2215

O_BomaASG11995_5prime_partial:A_BomaASG_c29437_g1_i1

109bp

2216

O_BomaASG11996_complete:A_BomaASG_c29438_g1_i1

875bp

echinoderm_microtubule-associated_protein-like_2_isoform_X2_[Bombyx_mori]

GO:0000226	P	microtubule cytoskeleton organization
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005856	C	cytoskeleton
GO:0005874	C	microtubule
GO:0007052	P	mitotic spindle organization
GO:0007405	P	neuroblast proliferation
GO:0007420	P	brain development
GO:0008017	F	microtubule binding
GO:0015631	F	tubulin binding
GO:0048471	C	perinuclear region of cytoplasm
GO:0097431	C	mitotic spindle pole
GO:1990023	C	mitotic spindle midzone