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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2131 O_BomaASG11919_complete:A_BomaASG_c29377_g1_i1
103bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
2132 O_BomaASG1191_internal:A_BomaASG_c8424_g1_i1
244bp
FH1/FH2_domain-containing_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005865 C striated muscle thin filament
GO:0007015 P actin filament organization
GO:0030017 C sarcomere
GO:0030018 C Z disc
GO:0030837 P negative regulation of actin filament polymerization
GO:0045214 P sarcomere organization
GO:0051639 P actin filament network formation
GO:0055003 P cardiac myofibril assembly
2133 O_BomaASG11920_complete:A_BomaASG_c29380_g1_i1
416bp
lipoyltransferase_1,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0008150 P biological_process
GO:0009249 P protein lipoylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
2134 O_BomaASG11921_complete:A_BomaASG_c29380_g1_i2
420bp
lipoyltransferase_1,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0008150 P biological_process
GO:0009249 P protein lipoylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
2135 O_BomaASG11922_complete:A_BomaASG_c29380_g1_i3
416bp
lipoyltransferase_1,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0008150 P biological_process
GO:0009249 P protein lipoylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
2136 O_BomaASG11923_complete:A_BomaASG_c29381_g1_i1
224bp
protein_sarah_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005759 C mitochondrial matrix
GO:0007005 P mitochondrion organization
GO:0007049 P cell cycle
GO:0007126 P meiotic cell cycle
GO:0007127 P meiosis I
GO:0007143 P female meiotic nuclear division
GO:0007275 P multicellular organism development
GO:0007343 P egg activation
GO:0007610 P behavior
GO:0007616 P long-term memory
GO:0008355 P olfactory learning
GO:0008597 F calcium-dependent protein serine/threonine phosphatase regulator activity
GO:0019722 P calcium-mediated signaling
GO:0030154 P cell differentiation
GO:0030431 P sleep
GO:0035039 P male pronucleus assembly
GO:0045924 P regulation of female receptivity
GO:0046008 P regulation of female receptivity, post-mating
GO:0048477 P oogenesis
GO:0050790 P regulation of catalytic activity
GO:0051321 P meiotic cell cycle
GO:0070884 P regulation of calcineurin-NFAT signaling cascade
2137 O_BomaASG11924_5prime_partial:A_BomaASG_c29383_g1_i2
246bp
polycomb_protein_suz12-B_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001739 C sex chromatin
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016574 P histone ubiquitination
GO:0031490 F chromatin DNA binding
GO:0032993 C protein-DNA complex
GO:0035064 F methylated histone binding
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0043565 F sequence-specific DNA binding
GO:0045596 P negative regulation of cell differentiation
GO:0045814 P negative regulation of gene expression, epigenetic
GO:0046872 F metal ion binding
2138 O_BomaASG11925_internal:A_BomaASG_c29383_g1_i3
484bp
polycomb_protein_suz12-B_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001739 C sex chromatin
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016574 P histone ubiquitination
GO:0031490 F chromatin DNA binding
GO:0032993 C protein-DNA complex
GO:0035064 F methylated histone binding
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0043565 F sequence-specific DNA binding
GO:0045596 P negative regulation of cell differentiation
GO:0045814 P negative regulation of gene expression, epigenetic
GO:0046872 F metal ion binding
2139 O_BomaASG11926_3prime_partial:A_BomaASG_c29384_g1_i1
130bp
putative_glutathione-specific_gamma-glutamylcyclotransferase_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
2140 O_BomaASG11927_5prime_partial:A_BomaASG_c29385_g1_i1
593bp
probable_Ufm1-specific_protease_2_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0012505 C endomembrane system
GO:0016787 F hydrolase activity
GO:0016790 F thiolester hydrolase activity
GO:0071567 F UFM1 hydrolase activity
2141 O_BomaASG11928_complete:A_BomaASG_c29385_g1_i2
204bp
probable_Ufm1-specific_protease_2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0016790 F thiolester hydrolase activity
GO:0071567 F UFM1 hydrolase activity
2142 O_BomaASG11929_3prime_partial:A_BomaASG_c29386_g1_i1
372bp
LIM_domain-binding_protein_2_[Bombyx_mori]
GO:0000989 F obsolete transcription factor activity, transcription factor binding
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008150 P biological_process
GO:0030274 F LIM domain binding
2143 O_BomaASG1192_internal:A_BomaASG_c8428_g1_i1
116bp
eye-specific_diacylglycerol_kinase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005875 C microtubule associated complex
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0007015 P actin filament organization
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0007605 P sensory perception of sound
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016056 P rhodopsin mediated signaling pathway
GO:0016059 P deactivation of rhodopsin mediated signaling
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019992 F diacylglycerol binding
GO:0035556 P intracellular signal transduction
GO:0043052 P thermotaxis
GO:0045494 P photoreceptor cell maintenance
GO:0046834 P lipid phosphorylation
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
2144 O_BomaASG11930_5prime_partial:A_BomaASG_c29386_g1_i1
136bp
2145 O_BomaASG11931_3prime_partial:A_BomaASG_c29386_g1_i2
372bp
LIM_domain-binding_protein_2_[Bombyx_mori]
GO:0000989 F obsolete transcription factor activity, transcription factor binding
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008150 P biological_process
GO:0030274 F LIM domain binding
2146 O_BomaASG11932_5prime_partial:A_BomaASG_c29386_g1_i2
136bp
2147 O_BomaASG11933_3prime_partial:A_BomaASG_c29386_g1_i3
372bp
LIM_domain-binding_protein_2_[Bombyx_mori]
GO:0000989 F obsolete transcription factor activity, transcription factor binding
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008150 P biological_process
GO:0030274 F LIM domain binding
2148 O_BomaASG11934_5prime_partial:A_BomaASG_c29386_g1_i3
136bp
2149 O_BomaASG11935_3prime_partial:A_BomaASG_c29386_g1_i4
372bp
LIM_domain-binding_protein_2_[Bombyx_mori]
GO:0000989 F obsolete transcription factor activity, transcription factor binding
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008150 P biological_process
GO:0030274 F LIM domain binding
2150 O_BomaASG11936_5prime_partial:A_BomaASG_c29386_g1_i4
136bp
2151 O_BomaASG11937_3prime_partial:A_BomaASG_c29386_g1_i5
372bp
LIM_domain-binding_protein_2_[Bombyx_mori]
GO:0000989 F obsolete transcription factor activity, transcription factor binding
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008150 P biological_process
GO:0030274 F LIM domain binding
2152 O_BomaASG11938_5prime_partial:A_BomaASG_c29386_g1_i5
136bp
2153 O_BomaASG11939_3prime_partial:A_BomaASG_c29388_g1_i1
248bp
histone-lysine_N-methyltransferase_SETMAR_[Bombyx_mori]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
2154 O_BomaASG1193_internal:A_BomaASG_c8428_g1_i1
116bp
2155 O_BomaASG11940_5prime_partial:A_BomaASG_c29391_g1_i1
479bp
Fanconi_anemia,_complementation_group_I_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016020 C membrane
GO:0031398 P positive regulation of protein ubiquitination
GO:0043240 C Fanconi anaemia nuclear complex
GO:0070182 F DNA polymerase binding
2156 O_BomaASG11941_internal:A_BomaASG_c29393_g1_i1
290bp
PREDICTED:_tyrosine-protein_kinase_PR2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030154 P cell differentiation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
2157 O_BomaASG11942_5prime_partial:A_BomaASG_c29395_g1_i1
109bp
2158 O_BomaASG11943_complete:A_BomaASG_c29396_g1_i2
321bp
iron-sulfur_protein_NUBPL_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0032981 P mitochondrial respiratory chain complex I assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0070584 P mitochondrion morphogenesis
2159 O_BomaASG11944_complete:A_BomaASG_c29396_g1_i2
107bp
hypothetical_protein_BamIOP4010DRAFT_5960_[Burkholderia_ambifaria_IOP40-10]
2160 O_BomaASG11945_complete:A_BomaASG_c29398_g1_i1
412bp
beta-arrestin-1-like_[Bombyx_mori]
GO:0001934 P positive regulation of protein phosphorylation
GO:0002092 P positive regulation of receptor internalization
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0007165 P signal transduction
GO:0009968 P negative regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0031143 C pseudopodium
GO:0031410 C cytoplasmic vesicle
GO:0042995 C cell projection
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