SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/32735
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1561 O_BomaASG11405_complete:A_BomaASG_c29013_g1_i2
617bp
FACT_complex_subunit_spt16_isoform_X1_[Bombyx_mori]
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
1562 O_BomaASG11406_complete:A_BomaASG_c29013_g1_i2
164bp
1563 O_BomaASG11407_complete:A_BomaASG_c29013_g1_i3
1140bp
FACT_complex_subunit_spt16_isoform_X1_[Bombyx_mori]
GO:0001672 P regulation of chromatin assembly or disassembly
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0022008 P neurogenesis
GO:0031491 F nucleosome binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
1564 O_BomaASG11408_complete:A_BomaASG_c29013_g1_i3
164bp
1565 O_BomaASG11409_3prime_partial:A_BomaASG_c29014_g1_i1
253bp
uncharacterized_protein_LOC101739504_[Bombyx_mori]
1566 O_BomaASG1140_5prime_partial:A_BomaASG_c7957_g1_i1
162bp
Mutant_cadherin_[Operophtera_brumata]
1567 O_BomaASG11410_complete:A_BomaASG_c29014_g1_i1
109bp
1568 O_BomaASG11411_5prime_partial:A_BomaASG_c29017_g1_i1
100bp
acyl-CoA_synthetase_family_member_2,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
1569 O_BomaASG11412_complete:A_BomaASG_c29021_g1_i1
134bp
hypothetical_protein_M513_07829_[Trichuris_suis]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
1570 O_BomaASG11413_3prime_partial:A_BomaASG_c29023_g1_i1
958bp
putative_epidermal_cell_surface_receptor_[Bombyx_mori]
GO:0002168 P instar larval development
GO:0004872 F signaling receptor activity
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
1571 O_BomaASG11414_complete:A_BomaASG_c29023_g1_i1
157bp
1572 O_BomaASG11415_5prime_partial:A_BomaASG_c29023_g1_i1
139bp
1573 O_BomaASG11416_complete:A_BomaASG_c29023_g1_i1
107bp
1574 O_BomaASG11417_3prime_partial:A_BomaASG_c29023_g1_i2
953bp
putative_epidermal_cell_surface_receptor_[Bombyx_mori]
GO:0002168 P instar larval development
GO:0004872 F signaling receptor activity
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
1575 O_BomaASG11418_complete:A_BomaASG_c29023_g1_i2
157bp
1576 O_BomaASG11419_5prime_partial:A_BomaASG_c29023_g1_i2
139bp
1577 O_BomaASG1141_internal:A_BomaASG_c7971_g1_i1
105bp
lachesin_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0016020 C membrane
GO:0016331 P morphogenesis of embryonic epithelium
GO:0019898 C extrinsic component of membrane
GO:0019991 P septate junction assembly
GO:0031225 C anchored component of membrane
GO:0035151 P regulation of tube size, open tracheal system
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0042803 F protein homodimerization activity
GO:0061343 P cell adhesion involved in heart morphogenesis
1578 O_BomaASG11420_complete:A_BomaASG_c29023_g1_i2
107bp
1579 O_BomaASG11421_complete:A_BomaASG_c29025_g1_i2
170bp
uncharacterized_protein_LOC101736829_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0043280 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0090200 P positive regulation of release of cytochrome c from mitochondria
GO:0097193 P intrinsic apoptotic signaling pathway
1580 O_BomaASG11422_5prime_partial:A_BomaASG_c29027_g1_i1
187bp
serine/threonine-protein_kinase_TBK1_[Bombyx_mori]
1581 O_BomaASG11423_5prime_partial:A_BomaASG_c29027_g1_i1
108bp
1582 O_BomaASG11424_5prime_partial:A_BomaASG_c29028_g1_i1
278bp
neuropeptide_receptor_A24_isoform_X2_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0004995 F tachykinin receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007217 P tachykinin receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0008188 F neuropeptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042048 P olfactory behavior
GO:0050805 P negative regulation of synaptic transmission
GO:0050911 P detection of chemical stimulus involved in sensory perception of smell
1583 O_BomaASG11425_complete:A_BomaASG_c29028_g1_i2
410bp
neuropeptide_receptor_A24_isoform_X2_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0004995 F tachykinin receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007217 P tachykinin receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0008188 F neuropeptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042048 P olfactory behavior
GO:0050805 P negative regulation of synaptic transmission
GO:0050911 P detection of chemical stimulus involved in sensory perception of smell
1584 O_BomaASG11426_3prime_partial:A_BomaASG_c29030_g1_i1
428bp
testis-expressed_protein_10_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031965 C nuclear membrane
GO:0071339 C MLL1 complex
1585 O_BomaASG11427_internal:A_BomaASG_c29030_g2_i1
117bp
testis-expressed_protein_10_[Bombyx_mori]
1586 O_BomaASG11428_complete:A_BomaASG_c29032_g1_i1
114bp
1587 O_BomaASG11429_internal:A_BomaASG_c29033_g1_i1
301bp
1588 O_BomaASG1142_internal:A_BomaASG_c7983_g1_i1
191bp
myophilin_[Bombyx_mori]
1589 O_BomaASG11430_3prime_partial:A_BomaASG_c29033_g1_i1
265bp
neurofibromin_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0001649 P osteoblast differentiation
GO:0001656 P metanephros development
GO:0001666 P response to hypoxia
GO:0001889 P liver development
GO:0001937 P negative regulation of endothelial cell proliferation
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0001952 P regulation of cell-matrix adhesion
GO:0001953 P negative regulation of cell-matrix adhesion
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006469 P negative regulation of protein kinase activity
GO:0007154 P cell communication
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007507 P heart development
GO:0007519 P skeletal muscle tissue development
GO:0008285 P negative regulation of cell population proliferation
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0008542 P visual learning
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0010468 P regulation of gene expression
GO:0014044 P Schwann cell development
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016525 P negative regulation of angiogenesis
GO:0021510 P spinal cord development
GO:0021764 P amygdala development
GO:0021897 P forebrain astrocyte development
GO:0021915 P neural tube development
GO:0021987 P cerebral cortex development
GO:0022011 P myelination in peripheral nervous system
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0030325 P adrenal gland development
GO:0030336 P negative regulation of cell migration
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031210 F phosphatidylcholine binding
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0034605 P cellular response to heat
GO:0035021 P negative regulation of Rac protein signal transduction
GO:0042060 P wound healing
GO:0042127 P regulation of cell population proliferation
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043407 P negative regulation of MAP kinase activity
GO:0043408 P regulation of MAPK cascade
GO:0043409 P negative regulation of MAPK cascade
GO:0043473 P pigmentation
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043535 P regulation of blood vessel endothelial cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0045124 P regulation of bone resorption
GO:0045671 P negative regulation of osteoclast differentiation
GO:0045685 P regulation of glial cell differentiation
GO:0045762 P positive regulation of adenylate cyclase activity
GO:0045765 P regulation of angiogenesis
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046929 P negative regulation of neurotransmitter secretion
GO:0048147 P negative regulation of fibroblast proliferation
GO:0048169 P regulation of long-term neuronal synaptic plasticity
GO:0048485 P sympathetic nervous system development
GO:0048593 P camera-type eye morphogenesis
GO:0048712 P negative regulation of astrocyte differentiation
GO:0048715 P negative regulation of oligodendrocyte differentiation
GO:0048745 P smooth muscle tissue development
GO:0048844 P artery morphogenesis
GO:0048853 P forebrain morphogenesis
GO:0050890 P cognition
GO:0061534 P gamma-aminobutyric acid secretion, neurotransmission
GO:0061535 P glutamate secretion, neurotransmission
GO:0098597 P observational learning
GO:0098793 C presynapse
GO:1900271 P regulation of long-term synaptic potentiation
GO:1902043 P positive regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2001241 P positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
1590 O_BomaASG11431_5prime_partial:A_BomaASG_c29033_g1_i1
195bp
previous next from show/32735

- SilkBase 1999-2023 -