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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1321 O_BomaASG1118_internal:A_BomaASG_c7636_g1_i1
105bp
1322 O_BomaASG11190_5prime_partial:A_BomaASG_c28919_g1_i1
155bp
1323 O_BomaASG11191_internal:A_BomaASG_c28919_g2_i1
104bp
1324 O_BomaASG11192_internal:A_BomaASG_c28919_g2_i1
103bp
sorting_nexin-25_isoform_X2_[Bombyx_mori]
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
1325 O_BomaASG11193_internal:A_BomaASG_c28919_g1_i2
304bp
sorting_nexin-25_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
1326 O_BomaASG11194_3prime_partial:A_BomaASG_c28919_g1_i2
226bp
1327 O_BomaASG11195_5prime_partial:A_BomaASG_c28919_g1_i2
155bp
1328 O_BomaASG11196_internal:A_BomaASG_c28919_g1_i3
111bp
sorting_nexin-25_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
1329 O_BomaASG11197_internal:A_BomaASG_c28919_g1_i3
111bp
1330 O_BomaASG11198_internal:A_BomaASG_c28919_g1_i4
178bp
sorting_nexin-25_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
1331 O_BomaASG11199_5prime_partial:A_BomaASG_c28919_g1_i4
155bp
1332 O_BomaASG1119_complete:A_BomaASG_c7673_g1_i1
150bp
oligosaccharyltransferase_complex_subunit_ostc-A_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1333 O_BomaASG111_internal:A_BomaASG_c759_g1_i1
129bp
LOW_QUALITY_PROTEIN:_adhesion_G_protein-coupled_receptor_A3_[Bombyx_mori]
1334 O_BomaASG11200_3prime_partial:A_BomaASG_c28919_g1_i4
100bp
1335 O_BomaASG11201_internal:A_BomaASG_c28919_g2_i4
248bp
sorting_nexin-25_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
1336 O_BomaASG11202_5prime_partial:A_BomaASG_c28919_g2_i4
151bp
1337 O_BomaASG11203_5prime_partial:A_BomaASG_c28921_g1_i1
130bp
1338 O_BomaASG11204_complete:A_BomaASG_c28922_g1_i1
346bp
presenilins-associated_rhomboid-like_protein,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030162 P regulation of proteolysis
GO:0090201 P negative regulation of release of cytochrome c from mitochondria
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903214 P regulation of protein targeting to mitochondrion
GO:2000377 P regulation of reactive oxygen species metabolic process
GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
1339 O_BomaASG11205_complete:A_BomaASG_c28922_g1_i3
341bp
presenilins-associated_rhomboid-like_protein,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030162 P regulation of proteolysis
GO:0090201 P negative regulation of release of cytochrome c from mitochondria
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903214 P regulation of protein targeting to mitochondrion
GO:2000377 P regulation of reactive oxygen species metabolic process
GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
1340 O_BomaASG11206_complete:A_BomaASG_c28924_g1_i2
347bp
lanC-like_protein_2_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0009789 P positive regulation of abscisic acid-activated signaling pathway
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0030864 C cortical actin cytoskeleton
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070273 F phosphatidylinositol-4-phosphate binding
1341 O_BomaASG11207_5prime_partial:A_BomaASG_c28924_g1_i3
274bp
lanC-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0009789 P positive regulation of abscisic acid-activated signaling pathway
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0030864 C cortical actin cytoskeleton
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070273 F phosphatidylinositol-4-phosphate binding
1342 O_BomaASG11208_complete:A_BomaASG_c28924_g1_i4
407bp
lanC-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004930 F G protein-coupled receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
GO:0050750 F low-density lipoprotein particle receptor binding
GO:0070062 C extracellular exosome
1343 O_BomaASG11209_5prime_partial:A_BomaASG_c28927_g1_i2
104bp
1344 O_BomaASG1120_internal:A_BomaASG_c7680_g1_i1
131bp
putative_VPS9-ankyrin_repeat-containing_protein_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042470 C melanosome
1345 O_BomaASG11210_3prime_partial:A_BomaASG_c28928_g1_i1
226bp
ribosomal_RNA-processing_protein_8_[Bombyx_mori]
1346 O_BomaASG11211_complete:A_BomaASG_c28931_g1_i1
196bp
GRAM_domain-containing_protein_1B_isoform_X4_[Bombyx_mori]
1347 O_BomaASG11212_complete:A_BomaASG_c28931_g1_i2
489bp
GRAM_domain-containing_protein_1B_isoform_X3_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
1348 O_BomaASG11213_complete:A_BomaASG_c28932_g1_i1
560bp
phosphoglucomutase_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004614 F phosphoglucomutase activity
GO:0005975 P carbohydrate metabolic process
GO:0006006 P glucose metabolic process
GO:0016853 F isomerase activity
GO:0016868 F intramolecular transferase activity, phosphotransferases
GO:0046872 F metal ion binding
GO:0071704 P organic substance metabolic process
1349 O_BomaASG11214_3prime_partial:A_BomaASG_c28936_g1_i1
361bp
uncharacterized_protein_LOC101746488_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008150 P biological_process
GO:0030154 P cell differentiation
GO:0044822 F RNA binding
1350 O_BomaASG11215_complete:A_BomaASG_c28936_g1_i1
130bp
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