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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1201 O_BomaASG11081_internal:A_BomaASG_c28843_g1_i1
221bp
ephrin_type-B_receptor_1-B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000902 P cell morphogenesis
GO:0001525 P angiogenesis
GO:0001655 P urogenital system development
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0004872 F signaling receptor activity
GO:0005003 F ephrin receptor activity
GO:0005005 F transmembrane-ephrin receptor activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007413 P axonal fasciculation
GO:0007612 P learning
GO:0008046 F axon guidance receptor activity
GO:0009887 P animal organ morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0021631 P optic nerve morphogenesis
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0022038 P corpus callosum development
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031290 P retinal ganglion cell axon guidance
GO:0042472 P inner ear morphogenesis
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0045202 C synapse
GO:0048013 P ephrin receptor signaling pathway
GO:0048168 P regulation of neuronal synaptic plasticity
GO:0048170 P positive regulation of long-term neuronal synaptic plasticity
GO:0048593 P camera-type eye morphogenesis
GO:0050770 P regulation of axonogenesis
GO:0050771 P negative regulation of axonogenesis
GO:0050878 P regulation of body fluid levels
GO:0051965 P positive regulation of synapse assembly
GO:0060021 P roof of mouth development
GO:0060996 P dendritic spine development
GO:0060997 P dendritic spine morphogenesis
GO:0071679 P commissural neuron axon guidance
1202 O_BomaASG11082_complete:A_BomaASG_c28843_g1_i1
135bp
1203 O_BomaASG11083_internal:A_BomaASG_c28845_g1_i1
201bp
nucleotide_excision_repair_protein_[Bombyx_mori]
1204 O_BomaASG11084_3prime_partial:A_BomaASG_c28845_g1_i2
276bp
nucleotide_excision_repair_protein_[Bombyx_mori]
1205 O_BomaASG11085_complete:A_BomaASG_c28845_g1_i2
114bp
1206 O_BomaASG11086_internal:A_BomaASG_c28846_g1_i1
273bp
cell_division_cycle_protein_20_homolog_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007399 P nervous system development
GO:0008022 F protein C-terminus binding
GO:0008284 P positive regulation of cell population proliferation
GO:0010997 F anaphase-promoting complex binding
GO:0016567 P protein ubiquitination
GO:0019899 F enzyme binding
GO:0030154 P cell differentiation
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031915 P positive regulation of synaptic plasticity
GO:0040020 P regulation of meiotic nuclear division
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042826 F histone deacetylase binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043234 C protein-containing complex
GO:0048471 C perinuclear region of cytoplasm
GO:0050773 P regulation of dendrite development
GO:0051301 P cell division
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0051439 P obsolete regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051488 P positive regulation of ubiquitin protein ligase activity
GO:0090129 P positive regulation of synapse maturation
GO:0097027 F ubiquitin-protein transferase activator activity
1207 O_BomaASG11087_complete:A_BomaASG_c28848_g1_i1
680bp
aspartyl/asparaginyl_beta-hydroxylase_isoform_X7_[Bombyx_mori]
GO:0004597 F peptidyl-aspartic acid 3-dioxygenase activity
GO:0005198 F structural molecule activity
GO:0005509 F calcium ion binding
GO:0005513 P detection of calcium ion
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006936 P muscle contraction
GO:0007389 P pattern specification process
GO:0008285 P negative regulation of cell population proliferation
GO:0008307 F structural constituent of muscle
GO:0009055 F electron transfer activity
GO:0010524 P positive regulation of calcium ion transport into cytosol
GO:0010649 P regulation of cell communication by electrical coupling
GO:0010880 P regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0010881 P regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
GO:0014701 C junctional sarcoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016529 C sarcoplasmic reticulum
GO:0018193 P peptidyl-amino acid modification
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0031585 P regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity
GO:0031647 P regulation of protein stability
GO:0032237 P activation of store-operated calcium channel activity
GO:0032541 C cortical endoplasmic reticulum
GO:0033017 C sarcoplasmic reticulum membrane
GO:0033018 C sarcoplasmic reticulum lumen
GO:0033198 P response to ATP
GO:0034220 P ion transmembrane transport
GO:0034704 C calcium channel complex
GO:0035108 P limb morphogenesis
GO:0042264 P peptidyl-aspartic acid hydroxylation
GO:0044325 F transmembrane transporter binding
GO:0045862 P positive regulation of proteolysis
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0060021 P roof of mouth development
GO:0060314 P regulation of ryanodine-sensitive calcium-release channel activity
GO:0060316 P positive regulation of ryanodine-sensitive calcium-release channel activity
GO:0060325 P face morphogenesis
GO:0070588 P calcium ion transmembrane transport
GO:0071277 P cellular response to calcium ion
GO:0090316 P positive regulation of intracellular protein transport
GO:0097202 P activation of cysteine-type endopeptidase activity
GO:1901879 P regulation of protein depolymerization
GO:1903779 P regulation of cardiac conduction
1208 O_BomaASG11088_complete:A_BomaASG_c28848_g1_i3
347bp
aspartyl/asparaginyl_beta-hydroxylase_isoform_X2_[Bombyx_mori]
GO:0004597 F peptidyl-aspartic acid 3-dioxygenase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0007389 P pattern specification process
GO:0008285 P negative regulation of cell population proliferation
GO:0010524 P positive regulation of calcium ion transport into cytosol
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016529 C sarcoplasmic reticulum
GO:0018193 P peptidyl-amino acid modification
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0031585 P regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity
GO:0031647 P regulation of protein stability
GO:0032237 P activation of store-operated calcium channel activity
GO:0032541 C cortical endoplasmic reticulum
GO:0033017 C sarcoplasmic reticulum membrane
GO:0033198 P response to ATP
GO:0035108 P limb morphogenesis
GO:0042264 P peptidyl-aspartic acid hydroxylation
GO:0045862 P positive regulation of proteolysis
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0060021 P roof of mouth development
GO:0060325 P face morphogenesis
GO:0070588 P calcium ion transmembrane transport
GO:0071277 P cellular response to calcium ion
GO:0090316 P positive regulation of intracellular protein transport
GO:0097202 P activation of cysteine-type endopeptidase activity
GO:1901879 P regulation of protein depolymerization
1209 O_BomaASG11089_5prime_partial:A_BomaASG_c28848_g1_i3
233bp
aspartyl/asparaginyl_beta-hydroxylase_isoform_X8_[Bombyx_mori]
1210 O_BomaASG1108_internal:A_BomaASG_c7511_g1_i1
130bp
chromosome-associated_kinesin_KIF4_isoform_X1_[Bombyx_mori]
1211 O_BomaASG11090_internal:A_BomaASG_c28849_g1_i1
134bp
Fanconi_anemia,_complementation_group_I_isoform_X3_[Bombyx_mori]
1212 O_BomaASG11091_internal:A_BomaASG_c28849_g1_i2
399bp
Fanconi_anemia,_complementation_group_I_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016020 C membrane
GO:0031398 P positive regulation of protein ubiquitination
GO:0043240 C Fanconi anaemia nuclear complex
GO:0070182 F DNA polymerase binding
1213 O_BomaASG11092_internal:A_BomaASG_c28849_g1_i3
158bp
Fanconi_anemia,_complementation_group_I_isoform_X3_[Bombyx_mori]
1214 O_BomaASG11093_internal:A_BomaASG_c28851_g1_i1
112bp
uncharacterized_protein_LOC101741874_[Bombyx_mori]
1215 O_BomaASG11094_3prime_partial:A_BomaASG_c28851_g1_i2
528bp
uncharacterized_protein_LOC110371817_[Helicoverpa_armigera]
1216 O_BomaASG11095_internal:A_BomaASG_c28852_g1_i1
147bp
reverse_transcriptase,_partial_[Bombyx_mori]
1217 O_BomaASG11096_complete:A_BomaASG_c28854_g1_i1
334bp
probable_uridine_nucleosidase_2_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006152 P purine nucleoside catabolic process
GO:0008152 P metabolic process
GO:0008477 F purine nucleosidase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0045437 F uridine nucleosidase activity
1218 O_BomaASG11097_complete:A_BomaASG_c28854_g1_i1
116bp
1219 O_BomaASG11098_internal:A_BomaASG_c28860_g1_i1
127bp
probable_ATP-dependent_RNA_helicase_DDX10_[Bombyx_mori]
1220 O_BomaASG11099_internal:A_BomaASG_c28860_g1_i2
514bp
probable_ATP-dependent_RNA_helicase_DDX10_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
1221 O_BomaASG1109_5prime_partial:A_BomaASG_c7518_g1_i1
158bp
putative_alternative_oxidase_[Danaus_plexippus_plexippus]
1222 O_BomaASG110_internal:A_BomaASG_c759_g1_i1
129bp
1223 O_BomaASG11100_5prime_partial:A_BomaASG_c28861_g1_i1
416bp
AF4/FMR2_family_member_3-like_isoform_X2_[Helicoverpa_armigera]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007366 P periodic partitioning by pair rule gene
GO:0008361 P regulation of cell size
GO:0032368 P regulation of lipid transport
GO:0042051 P compound eye photoreceptor development
GO:0051493 P regulation of cytoskeleton organization
1224 O_BomaASG11101_complete:A_BomaASG_c28861_g1_i1
131bp
1225 O_BomaASG11102_3prime_partial:A_BomaASG_c28861_g1_i1
119bp
1226 O_BomaASG11103_complete:A_BomaASG_c28861_g1_i1
103bp
1227 O_BomaASG11104_internal:A_BomaASG_c28862_g1_i1
214bp
rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0001558 P regulation of cell growth
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006928 P movement of cell or subcellular component
GO:0006941 P striated muscle contraction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007266 P Rho protein signal transduction
GO:0016020 C membrane
GO:0030010 P establishment of cell polarity
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051056 P regulation of small GTPase mediated signal transduction
1228 O_BomaASG11105_5prime_partial:A_BomaASG_c28862_g1_i1
121bp
1229 O_BomaASG11106_complete:A_BomaASG_c28863_g1_i1
609bp
gametogenetin-binding_protein_2-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
1230 O_BomaASG11107_5prime_partial:A_BomaASG_c28863_g1_i2
459bp
gametogenetin-binding_protein_2-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
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