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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8011 O_BomoMSG17210_3prime_partial:A_BomoMSG_c25755_g2_i1
163bp
8012 O_BomoMSG17211_complete:A_BomoMSG_c25755_g2_i1
135bp
8013 O_BomoMSG17212_complete:A_BomoMSG_c25755_g2_i1
116bp
8014 O_BomoMSG17213_complete:A_BomoMSG_c25755_g2_i1
100bp
8015 O_BomoMSG17214_3prime_partial:A_BomoMSG_c25755_g2_i2
1169bp
 uncharacterized_protein_LOC101735966_[Bombyx_mori]
8016 O_BomoMSG17215_3prime_partial:A_BomoMSG_c25755_g2_i2
163bp
8017 O_BomoMSG17216_complete:A_BomoMSG_c25755_g2_i2
135bp
8018 O_BomoMSG17217_complete:A_BomoMSG_c25755_g2_i2
116bp
8019 O_BomoMSG17218_complete:A_BomoMSG_c25755_g2_i2
100bp
8020 O_BomoMSG17219_5prime_partial:A_BomoMSG_c25756_g1_i1
263bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0020002 C host cell plasma membrane
GO:0033644 C host cell membrane
GO:0039660 F structural constituent of virion
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
8021 O_BomoMSG1721_5prime_partial:A_BomoMSG_c8209_g1_i1
116bp
 cytochrome_P450,_partial_[Bombyx_mori]
8022 O_BomoMSG17220_internal:A_BomoMSG_c25756_g1_i2
279bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0030430 C host cell cytoplasm
GO:0042025 C host cell nucleus
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
8023 O_BomoMSG17221_internal:A_BomoMSG_c25758_g1_i1
288bp
 transmembrane_and_TPR_repeat-containing_protein_4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8024 O_BomoMSG17222_internal:A_BomoMSG_c25758_g1_i2
210bp
 transmembrane_and_TPR_repeat-containing_protein_4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8025 O_BomoMSG17223_internal:A_BomoMSG_c25758_g1_i3
419bp
 transmembrane_and_TPR_repeat-containing_protein_4_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8026 O_BomoMSG17224_complete:A_BomoMSG_c25761_g1_i3
181bp
 ADP-ribosylation_factor-like_protein_1_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0007030 P Golgi organization
GO:0007264 P small GTPase mediated signal transduction
GO:0007269 P neurotransmitter secretion
GO:0007431 P salivary gland development
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0019904 F protein domain specific binding
GO:0030334 P regulation of cell migration
GO:0033227 P dsRNA transport
GO:0033363 P secretory granule organization
GO:0034067 P protein localization to Golgi apparatus
GO:0035220 P wing disc development
GO:0048488 P synaptic vesicle endocytosis
GO:0060628 P regulation of ER to Golgi vesicle-mediated transport
GO:0070861 P regulation of protein exit from endoplasmic reticulum
GO:0090158 P endoplasmic reticulum membrane organization
GO:0098793 C presynapse
8027 O_BomoMSG17225_complete:A_BomoMSG_c25762_g1_i1
263bp
 proline_synthetase_co-transcribed_bacterial-like_protein_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0030170 F pyridoxal phosphate binding
GO:0070062 C extracellular exosome
8028 O_BomoMSG17226_complete:A_BomoMSG_c25762_g1_i1
116bp
8029 O_BomoMSG17227_5prime_partial:A_BomoMSG_c25762_g1_i2
229bp
 proline_synthetase_co-transcribed_bacterial-like_protein_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0030170 F pyridoxal phosphate binding
GO:0070062 C extracellular exosome
8030 O_BomoMSG17228_complete:A_BomoMSG_c25762_g1_i2
116bp
8031 O_BomoMSG17229_5prime_partial:A_BomoMSG_c25763_g1_i1
333bp
 zinc_finger_protein_100_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8032 O_BomoMSG1722_internal:A_BomoMSG_c8212_g1_i1
103bp
 reverse_transcriptase,_partial_[Heteropterus_morpheus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8033 O_BomoMSG17230_complete:A_BomoMSG_c25763_g1_i1
113bp
8034 O_BomoMSG17231_5prime_partial:A_BomoMSG_c25763_g1_i3
300bp
 zinc_finger_protein_271_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8035 O_BomoMSG17232_complete:A_BomoMSG_c25763_g1_i3
113bp
8036 O_BomoMSG17233_5prime_partial:A_BomoMSG_c25763_g1_i4
329bp
 zinc_finger_protein_271_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8037 O_BomoMSG17234_complete:A_BomoMSG_c25763_g1_i4
113bp
8038 O_BomoMSG17235_complete:A_BomoMSG_c25763_g1_i6
396bp
 zinc_finger_protein_100_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8039 O_BomoMSG17236_complete:A_BomoMSG_c25763_g1_i6
113bp
8040 O_BomoMSG17237_complete:A_BomoMSG_c25763_g1_i7
364bp
 myoneurin_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
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