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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7441 O_BomoMSG16699_3prime_partial:A_BomoMSG_c25587_g1_i2
99bp
7442 O_BomoMSG1669_internal:A_BomoMSG_c7943_g1_i2
261bp
 DENN_domain-containing_protein_1A_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032456 P endocytic recycling
GO:0042734 C presynaptic membrane
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:1901981 F phosphatidylinositol phosphate binding
7443 O_BomoMSG166_5prime_partial:A_BomoMSG_c664_g1_i1
147bp
 autophagy-related_protein_101_isoform_X1_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005737 C cytoplasm
GO:0006914 P autophagy
7444 O_BomoMSG16700_3prime_partial:A_BomoMSG_c25587_g1_i3
99bp
7445 O_BomoMSG16701_5prime_partial:A_BomoMSG_c25587_g1_i4
184bp
 FAST_kinase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0004672 F protein kinase activity
GO:0005739 C mitochondrion
GO:0006468 P protein phosphorylation
GO:0044822 F RNA binding
GO:0045333 P cellular respiration
7446 O_BomoMSG16702_3prime_partial:A_BomoMSG_c25587_g1_i4
99bp
7447 O_BomoMSG16703_5prime_partial:A_BomoMSG_c25588_g4_i1
284bp
 glucose-6-phosphate_1-epimerase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005975 P carbohydrate metabolic process
GO:0016853 F isomerase activity
GO:0030246 F carbohydrate binding
GO:0044262 P cellular carbohydrate metabolic process
GO:0047938 F glucose-6-phosphate 1-epimerase activity
7448 O_BomoMSG16704_5prime_partial:A_BomoMSG_c25588_g4_i2
284bp
 glucose-6-phosphate_1-epimerase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005975 P carbohydrate metabolic process
GO:0016853 F isomerase activity
GO:0030246 F carbohydrate binding
GO:0044262 P cellular carbohydrate metabolic process
GO:0047938 F glucose-6-phosphate 1-epimerase activity
7449 O_BomoMSG16705_5prime_partial:A_BomoMSG_c25588_g4_i3
284bp
 glucose-6-phosphate_1-epimerase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005975 P carbohydrate metabolic process
GO:0016853 F isomerase activity
GO:0030246 F carbohydrate binding
GO:0044262 P cellular carbohydrate metabolic process
GO:0047938 F glucose-6-phosphate 1-epimerase activity
7450 O_BomoMSG16706_5prime_partial:A_BomoMSG_c25589_g1_i2
217bp
 P_protein_isoform_X5_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005302 F L-tyrosine transmembrane transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005789 C endoplasmic reticulum membrane
GO:0006726 P eye pigment biosynthetic process
GO:0006810 P transport
GO:0007286 P spermatid development
GO:0008283 P cell population proliferation
GO:0010008 C endosome membrane
GO:0015828 P tyrosine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030318 P melanocyte differentiation
GO:0033162 C melanosome membrane
GO:0042438 P melanin biosynthetic process
GO:0043473 P pigmentation
GO:0048066 P developmental pigmentation
GO:0055085 P transmembrane transport
7451 O_BomoMSG16707_3prime_partial:A_BomoMSG_c25589_g1_i2
124bp
7452 O_BomoMSG16708_5prime_partial:A_BomoMSG_c25589_g1_i3
238bp
 P_protein_isoform_X5_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005302 F L-tyrosine transmembrane transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005789 C endoplasmic reticulum membrane
GO:0006726 P eye pigment biosynthetic process
GO:0006810 P transport
GO:0007286 P spermatid development
GO:0008283 P cell population proliferation
GO:0010008 C endosome membrane
GO:0015828 P tyrosine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030318 P melanocyte differentiation
GO:0033162 C melanosome membrane
GO:0042438 P melanin biosynthetic process
GO:0043473 P pigmentation
GO:0048066 P developmental pigmentation
GO:0055085 P transmembrane transport
7453 O_BomoMSG16709_3prime_partial:A_BomoMSG_c25589_g1_i3
145bp
7454 O_BomoMSG1670_3prime_partial:A_BomoMSG_c7955_g1_i1
127bp
 uncharacterized_protein_LOC101741750_[Bombyx_mori]
7455 O_BomoMSG16710_5prime_partial:A_BomoMSG_c25589_g1_i4
240bp
 P_protein_isoform_X5_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005302 F L-tyrosine transmembrane transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005789 C endoplasmic reticulum membrane
GO:0006726 P eye pigment biosynthetic process
GO:0006810 P transport
GO:0007286 P spermatid development
GO:0008283 P cell population proliferation
GO:0010008 C endosome membrane
GO:0015828 P tyrosine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030318 P melanocyte differentiation
GO:0033162 C melanosome membrane
GO:0042438 P melanin biosynthetic process
GO:0043473 P pigmentation
GO:0048066 P developmental pigmentation
GO:0055085 P transmembrane transport
7456 O_BomoMSG16711_3prime_partial:A_BomoMSG_c25589_g1_i4
148bp
7457 O_BomoMSG16712_complete:A_BomoMSG_c25590_g1_i1
320bp
 E3_ubiquitin-protein_ligase_MARCH5_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051020 F GTPase binding
GO:0051865 P protein autoubiquitination
GO:0070585 P protein localization to mitochondrion
GO:0090140 P regulation of mitochondrial fission
GO:0090141 P positive regulation of mitochondrial fission
GO:0090344 P negative regulation of cell aging
7458 O_BomoMSG16713_complete:A_BomoMSG_c25591_g2_i1
555bp
 organic_cation_transporter_protein_isoform_X1_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
7459 O_BomoMSG16714_complete:A_BomoMSG_c25591_g1_i2
552bp
 organic_cation_transporter_protein_isoform_X2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
7460 O_BomoMSG16715_complete:A_BomoMSG_c25592_g1_i2
552bp
 endonuclease/exonuclease/phosphatase_family_domain-containing_protein_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0006281 P DNA repair
7461 O_BomoMSG16716_complete:A_BomoMSG_c25592_g1_i2
136bp
7462 O_BomoMSG16717_complete:A_BomoMSG_c25593_g1_i1
493bp
 lipoma-preferred_partner_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0008270 F zinc ion binding
GO:0030054 C cell junction
GO:0046872 F metal ion binding
7463 O_BomoMSG16718_5prime_partial:A_BomoMSG_c25594_g1_i1
283bp
 15-hydroxyprostaglandin_dehydrogenase_[NAD(+)]_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004957 F prostaglandin E receptor activity
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006693 P prostaglandin metabolic process
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007565 P female pregnancy
GO:0007567 P parturition
GO:0008152 P metabolic process
GO:0016404 F 15-hydroxyprostaglandin dehydrogenase (NAD+) activity
GO:0016491 F oxidoreductase activity
GO:0030728 P ovulation
GO:0045786 P negative regulation of cell cycle
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070403 F NAD+ binding
GO:0070493 P thrombin-activated receptor signaling pathway
GO:0097070 P ductus arteriosus closure
7464 O_BomoMSG16719_internal:A_BomoMSG_c25595_g1_i1
443bp
 nuclear_cap-binding_protein_subunit_1_[Bombyx_mori]
GO:0000339 F RNA cap binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005846 C nuclear cap binding complex
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016070 P RNA metabolic process
GO:0031047 P gene silencing by RNA
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0051028 P mRNA transport
7465 O_BomoMSG1671_internal:A_BomoMSG_c7964_g1_i1
154bp
 protein_disulfide-isomerase_like_protein_ERp57_[Bombyx_mori]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0009986 C cell surface
GO:0016853 F isomerase activity
GO:0034976 P response to endoplasmic reticulum stress
GO:0042470 C melanosome
GO:0043065 P positive regulation of apoptotic process
GO:0045454 P cell redox homeostasis
7466 O_BomoMSG16720_5prime_partial:A_BomoMSG_c25595_g1_i1
111bp
7467 O_BomoMSG16721_3prime_partial:A_BomoMSG_c25596_g1_i1
544bp
 chromatin_assembly_factor_1_subunit_B_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031497 P chromatin assembly
GO:0033186 C CAF-1 complex
GO:0042393 F histone binding
7468 O_BomoMSG16722_complete:A_BomoMSG_c25596_g1_i1
102bp
7469 O_BomoMSG16723_complete:A_BomoMSG_c25597_g1_i1
535bp
 organic_cation_transporter_protein_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0055085 P transmembrane transport
7470 O_BomoMSG16724_5prime_partial:A_BomoMSG_c25597_g1_i2
553bp
 organic_cation_transporter_protein_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0055085 P transmembrane transport
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