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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7171 O_BomoMSG16455_3prime_partial:A_BomoMSG_c25503_g1_i1
351bp
 presenilin-1_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002027 P regulation of heart rate
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005887 C integral component of plasma membrane
GO:0005938 C cell cortex
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006816 P calcium ion transport
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0008233 F peptidase activity
GO:0008593 P regulation of Notch signaling pathway
GO:0015677 P copper ion import
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030018 C Z disc
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043025 C neuronal cell body
GO:0043066 P negative regulation of apoptotic process
GO:0046331 P lateral inhibition
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048471 C perinuclear region of cytoplasm
GO:0048812 P neuron projection morphogenesis
GO:0050435 P amyloid-beta metabolic process
GO:0055037 C recycling endosome
GO:0070765 C gamma-secretase complex
7172 O_BomoMSG16456_3prime_partial:A_BomoMSG_c25503_g1_i2
340bp
 presenilin_isoform_B_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002027 P regulation of heart rate
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005887 C integral component of plasma membrane
GO:0005938 C cell cortex
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006816 P calcium ion transport
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0008233 F peptidase activity
GO:0008593 P regulation of Notch signaling pathway
GO:0015677 P copper ion import
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030018 C Z disc
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043025 C neuronal cell body
GO:0043066 P negative regulation of apoptotic process
GO:0046331 P lateral inhibition
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048471 C perinuclear region of cytoplasm
GO:0048812 P neuron projection morphogenesis
GO:0050435 P amyloid-beta metabolic process
GO:0055037 C recycling endosome
GO:0070765 C gamma-secretase complex
7173 O_BomoMSG16457_complete:A_BomoMSG_c25503_g2_i2
122bp
 uncharacterized_protein_LOC101742586_isoform_X1_[Bombyx_mori]
7174 O_BomoMSG16458_complete:A_BomoMSG_c25503_g2_i2
122bp
7175 O_BomoMSG16459_complete:A_BomoMSG_c25503_g2_i3
122bp
 uncharacterized_protein_LOC101742586_isoform_X1_[Bombyx_mori]
7176 O_BomoMSG1645_complete:A_BomoMSG_c7868_g1_i1
131bp
 hypothetical_protein_BRAFLDRAFT_84743_[Branchiostoma_floridae]
7177 O_BomoMSG16460_complete:A_BomoMSG_c25503_g2_i3
122bp
7178 O_BomoMSG16461_5prime_partial:A_BomoMSG_c25504_g1_i2
343bp
 zinc_finger_protein_391_isoform_X2_[Bombyx_mori]
GO:0002168 P instar larval development
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045998 P positive regulation of ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
7179 O_BomoMSG16462_complete:A_BomoMSG_c25504_g1_i2
166bp
7180 O_BomoMSG16463_5prime_partial:A_BomoMSG_c25504_g1_i3
292bp
 zinc_finger_protein_391_isoform_X2_[Bombyx_mori]
GO:0002168 P instar larval development
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045998 P positive regulation of ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
7181 O_BomoMSG16464_3prime_partial:A_BomoMSG_c25504_g1_i3
116bp
7182 O_BomoMSG16465_3prime_partial:A_BomoMSG_c25504_g2_i1
183bp
 zinc_finger_protein_391_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
7183 O_BomoMSG16466_internal:A_BomoMSG_c25507_g1_i1
125bp
7184 O_BomoMSG16467_internal:A_BomoMSG_c25507_g1_i1
124bp
7185 O_BomoMSG16468_internal:A_BomoMSG_c25507_g3_i1
115bp
 reverse_transcriptase,_partial_[Bombyx_mori]
7186 O_BomoMSG16469_internal:A_BomoMSG_c25507_g3_i1
115bp
 PREDICTED:_basement_membrane-specific_heparan_sulfate_proteoglycan_core_protein-like_[Papilio_xuthus]
7187 O_BomoMSG1646_internal:A_BomoMSG_c7869_g1_i1
202bp
 LOW_QUALITY_PROTEIN:_cytochrome_P450_6B5_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031000 P response to caffeine
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046680 P response to DDT
GO:0046701 P insecticide catabolic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
7188 O_BomoMSG16470_internal:A_BomoMSG_c25507_g3_i1
115bp
7189 O_BomoMSG16471_internal:A_BomoMSG_c25507_g2_i2
111bp
 reverse_transcriptase,_partial_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
7190 O_BomoMSG16472_internal:A_BomoMSG_c25507_g2_i2
111bp
7191 O_BomoMSG16473_internal:A_BomoMSG_c25507_g2_i2
111bp
 hikaru_genki_[Bombyx_mori]
7192 O_BomoMSG16474_5prime_partial:A_BomoMSG_c25508_g1_i1
112bp
 BTB/POZ_domain-containing_protein_10_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0042327 P positive regulation of phosphorylation
GO:1901215 P negative regulation of neuron death
7193 O_BomoMSG16475_complete:A_BomoMSG_c25508_g2_i1
280bp
 BTB/POZ_domain-containing_protein_10_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0042327 P positive regulation of phosphorylation
7194 O_BomoMSG16476_internal:A_BomoMSG_c25509_g1_i1
107bp
 flocculation_protein_FLO11_isoform_X1_[Bombyx_mori]
GO:0005507 F copper ion binding
GO:0005576 C extracellular region
GO:0007596 P blood coagulation
GO:0007599 P hemostasis
GO:0046872 F metal ion binding
7195 O_BomoMSG16477_5prime_partial:A_BomoMSG_c25509_g1_i5
442bp
 flocculation_protein_FLO11_isoform_X1_[Bombyx_mori]
7196 O_BomoMSG16478_3prime_partial:A_BomoMSG_c25509_g1_i5
175bp
 hypothetical_protein_A9F13_09g02629_[Clavispora_lusitaniae]
7197 O_BomoMSG16479_complete:A_BomoMSG_c25509_g1_i5
102bp
7198 O_BomoMSG1647_internal:A_BomoMSG_c7871_g1_i1
102bp
 protein_lines_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0007367 P segment polarity determination
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0008293 P torso signaling pathway
GO:0008544 P epidermis development
GO:0009880 P embryonic pattern specification
GO:0009946 P proximal/distal axis specification
GO:0016055 P Wnt signaling pathway
GO:0035220 P wing disc development
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048617 P embryonic foregut morphogenesis
GO:0048619 P embryonic hindgut morphogenesis
7199 O_BomoMSG16480_5prime_partial:A_BomoMSG_c25509_g1_i6
424bp
 mucin-4_isoform_X2_[Bombyx_mori]
7200 O_BomoMSG16481_complete:A_BomoMSG_c25509_g1_i6
126bp
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