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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4981 O_BomoMSG14484_complete:A_BomoMSG_c24815_g1_i1
139bp
 protein_yippee-like_CG15309_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0046872 F metal ion binding
4982 O_BomoMSG14485_complete:A_BomoMSG_c24815_g1_i2
139bp
 protein_yippee-like_CG15309_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0046872 F metal ion binding
4983 O_BomoMSG14486_5prime_partial:A_BomoMSG_c24815_g1_i5
137bp
 protein_yippee-like_CG15309_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0046872 F metal ion binding
4984 O_BomoMSG14487_complete:A_BomoMSG_c24816_g1_i1
593bp
 uncharacterized_protein_LOC101744002_[Bombyx_mori]
4985 O_BomoMSG14488_internal:A_BomoMSG_c24820_g1_i1
205bp
 MLE_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000785 C chromatin
GO:0000805 C X chromosome
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007549 P dosage compensation
GO:0008026 F helicase activity
GO:0008340 P determination of adult lifespan
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome
GO:0016787 F hydrolase activity
GO:0031453 P positive regulation of heterochromatin assembly
GO:0044822 F RNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048675 P axon extension
GO:0072487 C MSL complex
4986 O_BomoMSG14489_5prime_partial:A_BomoMSG_c24821_g1_i1
145bp
 uncharacterized_protein_LOC101744245_[Bombyx_mori]
4987 O_BomoMSG1448_3prime_partial:A_BomoMSG_c7063_g1_i1
118bp
4988 O_BomoMSG14490_5prime_partial:A_BomoMSG_c24821_g1_i2
226bp
 uncharacterized_protein_LOC101744245_[Bombyx_mori]
4989 O_BomoMSG14491_complete:A_BomoMSG_c24821_g1_i3
188bp
 uncharacterized_protein_LOC101744245_[Bombyx_mori]
4990 O_BomoMSG14492_internal:A_BomoMSG_c24822_g1_i1
603bp
 carnitine_O-palmitoyltransferase_1,_liver_isoform_isoform_X1_[Bombyx_mori]
GO:0001676 P long-chain fatty acid metabolic process
GO:0004095 F carnitine O-palmitoyltransferase activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006641 P triglyceride metabolic process
GO:0006810 P transport
GO:0006853 P carnitine shuttle
GO:0007623 P circadian rhythm
GO:0009437 P carnitine metabolic process
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0030855 P epithelial cell differentiation
GO:0031307 C integral component of mitochondrial outer membrane
GO:0032000 P positive regulation of fatty acid beta-oxidation
GO:0042493 P response to xenobiotic stimulus
GO:0042755 P eating behavior
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046320 P regulation of fatty acid oxidation
GO:0050796 P regulation of insulin secretion
GO:0051260 P protein homooligomerization
GO:0071398 P cellular response to fatty acid
GO:1990698 F palmitoleoyltransferase activity
4991 O_BomoMSG14493_3prime_partial:A_BomoMSG_c24822_g1_i2
709bp
 carnitine_O-palmitoyltransferase_1,_liver_isoform_isoform_X1_[Bombyx_mori]
GO:0001676 P long-chain fatty acid metabolic process
GO:0004095 F carnitine O-palmitoyltransferase activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006641 P triglyceride metabolic process
GO:0006810 P transport
GO:0006853 P carnitine shuttle
GO:0007623 P circadian rhythm
GO:0009437 P carnitine metabolic process
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0030855 P epithelial cell differentiation
GO:0031307 C integral component of mitochondrial outer membrane
GO:0032000 P positive regulation of fatty acid beta-oxidation
GO:0042493 P response to xenobiotic stimulus
GO:0042755 P eating behavior
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046320 P regulation of fatty acid oxidation
GO:0050796 P regulation of insulin secretion
GO:0051260 P protein homooligomerization
GO:0071398 P cellular response to fatty acid
GO:1990698 F palmitoleoyltransferase activity
4992 O_BomoMSG14494_3prime_partial:A_BomoMSG_c24823_g1_i1
361bp
 WD_and_tetratricopeptide_repeats_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001701 P in utero embryonic development
GO:0004857 F enzyme inhibitor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006006 P glucose metabolic process
GO:0008361 P regulation of cell size
GO:0016567 P protein ubiquitination
GO:0032869 P cellular response to insulin stimulus
GO:0035264 P multicellular organism growth
GO:0042393 F histone binding
GO:0042826 F histone deacetylase binding
GO:0043086 P negative regulation of catalytic activity
GO:0045717 P negative regulation of fatty acid biosynthetic process
GO:0055082 P cellular chemical homeostasis
4993 O_BomoMSG14495_5prime_partial:A_BomoMSG_c24823_g1_i1
261bp
4994 O_BomoMSG14496_3prime_partial:A_BomoMSG_c24823_g1_i2
361bp
 WD_and_tetratricopeptide_repeats_protein_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001701 P in utero embryonic development
GO:0004857 F enzyme inhibitor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006006 P glucose metabolic process
GO:0008361 P regulation of cell size
GO:0016567 P protein ubiquitination
GO:0032869 P cellular response to insulin stimulus
GO:0035264 P multicellular organism growth
GO:0042393 F histone binding
GO:0042826 F histone deacetylase binding
GO:0043086 P negative regulation of catalytic activity
GO:0045717 P negative regulation of fatty acid biosynthetic process
GO:0055082 P cellular chemical homeostasis
4995 O_BomoMSG14497_5prime_partial:A_BomoMSG_c24823_g1_i2
261bp
4996 O_BomoMSG14498_complete:A_BomoMSG_c24828_g1_i1
194bp
 ubiquinone_biosynthesis_protein_COQ7-like_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003682 F chromatin binding
GO:0004497 F monooxygenase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006744 P ubiquinone biosynthetic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0042493 P response to xenobiotic stimulus
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:2000377 P regulation of reactive oxygen species metabolic process
4997 O_BomoMSG14499_complete:A_BomoMSG_c24828_g1_i2
202bp
 ubiquinone_biosynthesis_protein_COQ7-like_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003682 F chromatin binding
GO:0004497 F monooxygenase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006744 P ubiquinone biosynthetic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0042493 P response to xenobiotic stimulus
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:2000377 P regulation of reactive oxygen species metabolic process
4998 O_BomoMSG1449_internal:A_BomoMSG_c7070_g1_i1
110bp
 protein_D2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0008289 F lipid binding
4999 O_BomoMSG144_5prime_partial:A_BomoMSG_c543_g1_i1
215bp
5000 O_BomoMSG14500_complete:A_BomoMSG_c24829_g2_i2
138bp
 CCR4-NOT_transcription_complex_subunit_3_isoform_X3_[Bombyx_mori]
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0001829 P trophectodermal cell differentiation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030015 C CCR4-NOT core complex
GO:0031047 P gene silencing by RNA
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:2000036 P regulation of stem cell population maintenance
5001 O_BomoMSG14501_5prime_partial:A_BomoMSG_c24829_g2_i3
269bp
 CCR4-NOT_transcription_complex_subunit_3_isoform_X2_[Bombyx_mori]
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 C P-body
GO:0001829 P trophectodermal cell differentiation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0007275 P multicellular organism development
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030015 C CCR4-NOT core complex
GO:0031047 P gene silencing by RNA
GO:2000036 P regulation of stem cell population maintenance
5002 O_BomoMSG14502_5prime_partial:A_BomoMSG_c24829_g2_i3
122bp
5003 O_BomoMSG14503_3prime_partial:A_BomoMSG_c24830_g1_i2
109bp
 uncharacterized_protein_LOC100286771_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008150 P biological_process
GO:0042555 C MCM complex
GO:0051301 P cell division
5004 O_BomoMSG14504_5prime_partial:A_BomoMSG_c24831_g1_i1
245bp
 DCN1-like_protein_5_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032182 F ubiquitin-like protein binding
GO:0045116 P protein neddylation
GO:0051443 P positive regulation of ubiquitin-protein transferase activity
GO:0097602 F cullin family protein binding
5005 O_BomoMSG14505_complete:A_BomoMSG_c24832_g1_i1
265bp
 autophagy_5-like_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006501 P C-terminal protein lipidation
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006995 P cellular response to nitrogen starvation
GO:0009267 P cellular response to starvation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0019776 F Atg8 ligase activity
GO:0034045 C phagophore assembly site membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035071 P salivary gland cell autophagic cell death
GO:0035096 P larval midgut cell programmed cell death
GO:0044804 P autophagy of nucleus
GO:0048102 P autophagic cell death
GO:0061723 P glycophagy
5006 O_BomoMSG14506_complete:A_BomoMSG_c24835_g1_i2
307bp
 regucalcin_[Bombyx_mori]
GO:0004341 F gluconolactonase activity
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0019853 P L-ascorbic acid biosynthetic process
GO:0030234 F enzyme regulator activity
GO:0046872 F metal ion binding
GO:0050790 P regulation of catalytic activity
5007 O_BomoMSG14507_5prime_partial:A_BomoMSG_c24835_g1_i2
134bp
5008 O_BomoMSG14508_complete:A_BomoMSG_c24835_g1_i4
307bp
 regucalcin_[Bombyx_mori]
GO:0004341 F gluconolactonase activity
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0019853 P L-ascorbic acid biosynthetic process
GO:0030234 F enzyme regulator activity
GO:0046872 F metal ion binding
GO:0050790 P regulation of catalytic activity
5009 O_BomoMSG14509_5prime_partial:A_BomoMSG_c24835_g1_i4
134bp
5010 O_BomoMSG1450_internal:A_BomoMSG_c7071_g1_i1
131bp
 uncharacterized_protein_LOC110370783_[Helicoverpa_armigera]
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