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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4081 O_BomoMSG13674_complete:A_BomoMSG_c24448_g1_i1
189bp
4082 O_BomoMSG13675_complete:A_BomoMSG_c24448_g1_i1
163bp
4083 O_BomoMSG13676_complete:A_BomoMSG_c24448_g1_i1
155bp
4084 O_BomoMSG13677_complete:A_BomoMSG_c24448_g1_i1
125bp
4085 O_BomoMSG13678_complete:A_BomoMSG_c24448_g1_i1
115bp
4086 O_BomoMSG13679_5prime_partial:A_BomoMSG_c24448_g1_i1
108bp
4087 O_BomoMSG1367_complete:A_BomoMSG_c6267_g1_i1
250bp
 transcription_factor_A,_mitochondrial_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001223 F transcription coactivator binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006261 P DNA-dependent DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006356 P regulation of transcription by RNA polymerase I
GO:0006366 P transcription by RNA polymerase II
GO:0006390 P mitochondrial transcription
GO:0006391 P transcription initiation from mitochondrial promoter
GO:0007005 P mitochondrion organization
GO:0008301 F DNA binding, bending
GO:0031072 F heat shock protein binding
GO:0033108 P mitochondrial respiratory chain complex assembly
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070363 F mitochondrial promoter sequence-specific DNA binding
4088 O_BomoMSG13680_3prime_partial:A_BomoMSG_c24449_g1_i3
276bp
 kelch-like_protein_3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0015629 C actin cytoskeleton
GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
4089 O_BomoMSG13681_5prime_partial:A_BomoMSG_c24449_g1_i3
186bp
4090 O_BomoMSG13682_complete:A_BomoMSG_c24449_g1_i3
108bp
4091 O_BomoMSG13683_3prime_partial:A_BomoMSG_c24450_g1_i1
168bp
 THO_complex_subunit_6_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0051028 P mRNA transport
4092 O_BomoMSG13684_complete:A_BomoMSG_c24452_g1_i1
371bp
 lachesin_isoform_X1_[Bombyx_mori]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
4093 O_BomoMSG13685_complete:A_BomoMSG_c24452_g1_i1
225bp
4094 O_BomoMSG13686_complete:A_BomoMSG_c24452_g1_i1
117bp
4095 O_BomoMSG13687_internal:A_BomoMSG_c24453_g1_i1
484bp
 protein_O-GlcNAcase_[Bombyx_mori]
GO:0004402 F histone acetyltransferase activity
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006612 P protein targeting to membrane
GO:0007568 P aging
GO:0008152 P metabolic process
GO:0010524 P positive regulation of calcium ion transport into cytosol
GO:0010616 P negative regulation of cardiac muscle adaptation
GO:0016231 F beta-N-acetylglucosaminidase activity
GO:0016573 P histone acetylation
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0031343 P positive regulation of cell killing
GO:0032024 P positive regulation of insulin secretion
GO:0043243 P positive regulation of protein-containing complex disassembly
GO:0045862 P positive regulation of proteolysis
GO:0046060 P dATP metabolic process
GO:0046326 P positive regulation of glucose import
GO:0048545 P response to steroid hormone
GO:0051054 P positive regulation of DNA metabolic process
GO:0051901 P positive regulation of mitochondrial depolarization
GO:0051928 P positive regulation of calcium ion transport
GO:0060051 P negative regulation of protein glycosylation
GO:0060124 P positive regulation of growth hormone secretion
GO:0070265 P necrotic cell death
4096 O_BomoMSG13688_complete:A_BomoMSG_c24453_g1_i1
202bp
4097 O_BomoMSG13689_internal:A_BomoMSG_c24453_g1_i2
590bp
 protein_O-GlcNAcase_[Bombyx_mori]
GO:0004402 F histone acetyltransferase activity
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006612 P protein targeting to membrane
GO:0007568 P aging
GO:0008152 P metabolic process
GO:0010524 P positive regulation of calcium ion transport into cytosol
GO:0010616 P negative regulation of cardiac muscle adaptation
GO:0016231 F beta-N-acetylglucosaminidase activity
GO:0016573 P histone acetylation
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0031343 P positive regulation of cell killing
GO:0032024 P positive regulation of insulin secretion
GO:0043243 P positive regulation of protein-containing complex disassembly
GO:0045862 P positive regulation of proteolysis
GO:0046060 P dATP metabolic process
GO:0046326 P positive regulation of glucose import
GO:0048545 P response to steroid hormone
GO:0051054 P positive regulation of DNA metabolic process
GO:0051901 P positive regulation of mitochondrial depolarization
GO:0051928 P positive regulation of calcium ion transport
GO:0060051 P negative regulation of protein glycosylation
GO:0060124 P positive regulation of growth hormone secretion
GO:0070265 P necrotic cell death
4098 O_BomoMSG1368_internal:A_BomoMSG_c6269_g1_i1
243bp
 fatty_acid_transport_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031957 F very long-chain fatty acid-CoA ligase activity
4099 O_BomoMSG13690_complete:A_BomoMSG_c24453_g1_i2
202bp
4100 O_BomoMSG13691_complete:A_BomoMSG_c24454_g1_i1
1333bp
 protein_brunelleschi_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000916 P actomyosin contractile ring contraction
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007112 P male meiosis cytokinesis
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0036063 C acroblast
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0048137 P spermatocyte division
4101 O_BomoMSG13692_5prime_partial:A_BomoMSG_c24454_g1_i2
786bp
 protein_brunelleschi_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0000916 P actomyosin contractile ring contraction
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007112 P male meiosis cytokinesis
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0036063 C acroblast
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0048137 P spermatocyte division
4102 O_BomoMSG13693_internal:A_BomoMSG_c24456_g1_i1
434bp
 probable_2-oxoglutarate_dehydrogenase_E1_component_DHKTD1_homolog,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004591 F oxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006091 P generation of precursor metabolites and energy
GO:0006096 P glycolytic process
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016624 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0030976 F thiamine pyrophosphate binding
GO:0031966 C mitochondrial membrane
GO:0045252 C oxoglutarate dehydrogenase complex
GO:0055114 P obsolete oxidation-reduction process
4103 O_BomoMSG13694_internal:A_BomoMSG_c24456_g1_i2
327bp
 probable_2-oxoglutarate_dehydrogenase_E1_component_DHKTD1_homolog,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004591 F oxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006091 P generation of precursor metabolites and energy
GO:0006096 P glycolytic process
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016624 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0030976 F thiamine pyrophosphate binding
GO:0031966 C mitochondrial membrane
GO:0045252 C oxoglutarate dehydrogenase complex
GO:0055114 P obsolete oxidation-reduction process
4104 O_BomoMSG13695_5prime_partial:A_BomoMSG_c24459_g1_i1
468bp
 alpha,alpha-trehalose-phosphate_synthase_[UDP-forming]_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003825 F alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
GO:0004805 F trehalose-phosphatase activity
GO:0005975 P carbohydrate metabolic process
GO:0005992 P trehalose biosynthetic process
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
4105 O_BomoMSG13696_5prime_partial:A_BomoMSG_c24459_g1_i2
158bp
 alpha,alpha-trehalose-phosphate_synthase_[UDP-forming]_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004805 F trehalose-phosphatase activity
GO:0005992 P trehalose biosynthetic process
GO:0009409 P response to cold
GO:0009651 P response to salt stress
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
4106 O_BomoMSG13697_5prime_partial:A_BomoMSG_c24460_g1_i1
423bp
 superkiller_viralicidic_activity_2-like_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000178 C exosome (RNase complex)
GO:0000398 P mRNA splicing, via spliceosome
GO:0000460 P maturation of 5.8S rRNA
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006401 P RNA catabolic process
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
4107 O_BomoMSG13698_complete:A_BomoMSG_c24460_g1_i2
1031bp
 superkiller_viralicidic_activity_2-like_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000178 C exosome (RNase complex)
GO:0000398 P mRNA splicing, via spliceosome
GO:0000460 P maturation of 5.8S rRNA
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006401 P RNA catabolic process
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
4108 O_BomoMSG13699_internal:A_BomoMSG_c24462_g1_i1
235bp
 putative_Copia_protein_[Danaus_plexippus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4109 O_BomoMSG1369_internal:A_BomoMSG_c6288_g1_i1
135bp
 nesprin-1_isoform_X1_[Bombyx_mori]
4110 O_BomoMSG136_internal:A_BomoMSG_c498_g1_i1
108bp
 uncharacterized_LOC101743290_precursor_[Bombyx_mori]
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