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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
391 O_BomoMSG10352_complete:A_BomoMSG_c22629_g1_i2
132bp
 protein_FMC1_homolog_[Bombyx_mori]
GO:0005739 C mitochondrion
392 O_BomoMSG10353_complete:A_BomoMSG_c22629_g1_i3
132bp
 protein_FMC1_homolog_[Bombyx_mori]
GO:0005739 C mitochondrion
393 O_BomoMSG10354_complete:A_BomoMSG_c22629_g1_i4
132bp
 protein_FMC1_homolog_[Bombyx_mori]
GO:0005739 C mitochondrion
394 O_BomoMSG10355_internal:A_BomoMSG_c22630_g1_i1
130bp
 E3_ubiquitin-protein_ligase_MGRN1_isoform_X2_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
395 O_BomoMSG10356_3prime_partial:A_BomoMSG_c22630_g1_i2
130bp
 E3_ubiquitin-protein_ligase_MGRN1_isoform_X2_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
396 O_BomoMSG10357_internal:A_BomoMSG_c22631_g1_i1
402bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101740083_[Bombyx_mori]
397 O_BomoMSG10358_3prime_partial:A_BomoMSG_c22632_g1_i1
157bp
 transcriptional_adapter_2A_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016573 P histone acetylation
GO:0035066 P positive regulation of histone acetylation
GO:0070461 C SAGA-type complex
398 O_BomoMSG10359_complete:A_BomoMSG_c22634_g1_i1
267bp
 ankyrin_repeat_domain-containing_protein_54_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006913 P nucleocytoplasmic transport
GO:0019887 F protein kinase regulator activity
GO:0030496 C midbody
GO:0032403 F protein-containing complex binding
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045859 P regulation of protein kinase activity
GO:1902531 P regulation of intracellular signal transduction
399 O_BomoMSG1035_complete:A_BomoMSG_c4793_g1_i1
136bp
400 O_BomoMSG10360_complete:A_BomoMSG_c22634_g1_i2
267bp
 ankyrin_repeat_domain-containing_protein_54_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006913 P nucleocytoplasmic transport
GO:0019887 F protein kinase regulator activity
GO:0030496 C midbody
GO:0032403 F protein-containing complex binding
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045859 P regulation of protein kinase activity
GO:1902531 P regulation of intracellular signal transduction
401 O_BomoMSG10361_internal:A_BomoMSG_c22635_g1_i1
151bp
 lon_protease_homolog,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0007568 P aging
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009725 P response to hormone
GO:0010044 P response to aluminum ion
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030163 P protein catabolic process
GO:0032042 P mitochondrial DNA metabolic process
GO:0034599 P cellular response to oxidative stress
GO:0042645 C mitochondrial nucleoid
GO:0043531 F ADP binding
GO:0043565 F sequence-specific DNA binding
GO:0043623 P protein-containing complex assembly
GO:0051131 P chaperone-mediated protein complex assembly
GO:0051260 P protein homooligomerization
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0051880 F G-quadruplex DNA binding
GO:0070182 F DNA polymerase binding
GO:0070361 F mitochondrial promoter sequence-specific DNA binding
GO:0070362 F mitochondrial promoter sequence-specific DNA binding
GO:0070363 F mitochondrial promoter sequence-specific DNA binding
GO:0070364 F mitochondrial promoter sequence-specific DNA binding
GO:0070407 P oxidation-dependent protein catabolic process
402 O_BomoMSG10362_5prime_partial:A_BomoMSG_c22636_g1_i1
127bp
 uncharacterized_protein_LOC105841355_isoform_X4_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005737 C cytoplasm
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0012505 C endomembrane system
GO:0015758 P glucose transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0048471 C perinuclear region of cytoplasm
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
403 O_BomoMSG10363_complete:A_BomoMSG_c22636_g1_i1
122bp
404 O_BomoMSG10364_complete:A_BomoMSG_c22636_g1_i3
168bp
 uncharacterized_protein_LOC105841355_isoform_X5_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
405 O_BomoMSG10365_complete:A_BomoMSG_c22636_g1_i3
125bp
406 O_BomoMSG10366_complete:A_BomoMSG_c22636_g1_i5
474bp
 facilitated_trehalose_transporter_Tret1_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
407 O_BomoMSG10367_complete:A_BomoMSG_c22636_g1_i5
171bp
408 O_BomoMSG10368_complete:A_BomoMSG_c22636_g1_i6
434bp
 facilitated_trehalose_transporter_Tret1_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
409 O_BomoMSG10369_complete:A_BomoMSG_c22636_g1_i6
143bp
410 O_BomoMSG1036_5prime_partial:A_BomoMSG_c4793_g1_i1
127bp
411 O_BomoMSG10370_3prime_partial:A_BomoMSG_c22637_g1_i2
383bp
 dnaJ_homolog_subfamily_C_member_10_isoform_X1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0015035 F protein-disulfide reductase activity
GO:0015036 F disulfide oxidoreductase activity
GO:0016491 F oxidoreductase activity
GO:0016671 F oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0034975 P protein folding in endoplasmic reticulum
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
412 O_BomoMSG10371_3prime_partial:A_BomoMSG_c22637_g1_i3
383bp
 dnaJ_homolog_subfamily_C_member_10_isoform_X1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0015035 F protein-disulfide reductase activity
GO:0015036 F disulfide oxidoreductase activity
GO:0016491 F oxidoreductase activity
GO:0016671 F oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0034975 P protein folding in endoplasmic reticulum
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
413 O_BomoMSG10372_3prime_partial:A_BomoMSG_c22639_g1_i1
351bp
 protein_ovo_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0007275 P multicellular organism development
GO:0008343 P adult feeding behavior
GO:0008360 P regulation of cell shape
GO:0009913 P epidermal cell differentiation
GO:0016348 P imaginal disc-derived leg joint morphogenesis
GO:0018992 P germ-line sex determination
GO:0019099 P female germ-line sex determination
GO:0030154 P cell differentiation
GO:0035017 P cuticle pattern formation
GO:0035316 P non-sensory hair organization
GO:0042335 P cuticle development
GO:0042810 P pheromone metabolic process
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048067 P cuticle pigmentation
GO:0048477 P oogenesis
GO:0070896 P positive regulation of transposon integration
414 O_BomoMSG10373_3prime_partial:A_BomoMSG_c22639_g1_i1
99bp
415 O_BomoMSG10374_3prime_partial:A_BomoMSG_c22640_g1_i1
118bp
 fatty_acid_binding_protein_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0008289 F lipid binding
416 O_BomoMSG10375_complete:A_BomoMSG_c22640_g1_i1
102bp
417 O_BomoMSG10376_3prime_partial:A_BomoMSG_c22640_g1_i2
118bp
 fatty_acid_binding_protein_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0008289 F lipid binding
418 O_BomoMSG10377_complete:A_BomoMSG_c22640_g1_i2
102bp
419 O_BomoMSG10378_3prime_partial:A_BomoMSG_c22642_g2_i2
101bp
 E3_ubiquitin-protein_ligase_RNF168_[Bombyx_mori]
420 O_BomoMSG10379_3prime_partial:A_BomoMSG_c22643_g1_i1
376bp
 uncharacterized_protein_LOC101742065_isoform_X1_[Bombyx_mori]
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