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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3541 O_BomoMSG13188_complete:A_BomoMSG_c24231_g1_i1
172bp
 BLOC-1-related_complex_subunit_8_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3542 O_BomoMSG13189_complete:A_BomoMSG_c24232_g1_i1
192bp
 28S_ribosomal_protein_S11,_mitochondrial_[Bombyx_mori]
GO:0000028 P ribosomal small subunit assembly
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0044822 F RNA binding
GO:0048027 F mRNA 5'-UTR binding
GO:0070125 P mitochondrial translational elongation
GO:0070126 P mitochondrial translational termination
GO:0070181 F small ribosomal subunit rRNA binding
3543 O_BomoMSG1318_internal:A_BomoMSG_c6010_g1_i1
206bp
 regulatory-associated_protein_of_TOR_[Bombyx_mori]
GO:0001030 F RNA polymerase III type 1 promoter sequence-specific DNA binding
GO:0001031 F RNA polymerase III type 2 promoter sequence-specific DNA binding
GO:0001032 F RNA polymerase III type 3 promoter sequence-specific DNA binding
GO:0001156 F TFIIIC-class transcription factor complex binding
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0007050 P regulation of cell cycle
GO:0008361 P regulation of cell size
GO:0016049 P cell growth
GO:0016236 P macroautophagy
GO:0019901 F protein kinase binding
GO:0030425 C dendrite
GO:0031669 P cellular response to nutrient levels
GO:0031929 P TOR signaling
GO:0031931 C TORC1 complex
GO:0032008 P positive regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0042325 P regulation of phosphorylation
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0045945 P positive regulation of transcription by RNA polymerase III
GO:0071230 P cellular response to amino acid stimulus
GO:0071889 F 14-3-3 protein binding
GO:0071902 P positive regulation of protein serine/threonine kinase activity
GO:1900034 P regulation of cellular response to heat
3544 O_BomoMSG13190_internal:A_BomoMSG_c24233_g1_i1
374bp
 structure-specific_endonuclease_subunit_SLX4_[Bombyx_mori]
GO:0000712 P resolution of meiotic recombination intermediates
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007131 P reciprocal meiotic recombination
GO:0008283 P cell population proliferation
GO:0017108 F 5'-flap endonuclease activity
GO:0033557 C Slx1-Slx4 complex
GO:0035825 P homologous recombination
GO:0043234 C protein-containing complex
GO:0045132 P meiotic chromosome segregation
3545 O_BomoMSG13191_complete:A_BomoMSG_c24234_g1_i1
348bp
 MAP_kinase-activated_protein_kinase_2_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008360 P regulation of cell shape
GO:0009651 P response to salt stress
GO:0009931 F calcium-dependent protein serine/threonine kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0045793 P positive regulation of cell size
GO:0046328 P regulation of JNK cascade
GO:0046777 P protein autophosphorylation
3546 O_BomoMSG13192_5prime_partial:A_BomoMSG_c24234_g1_i2
146bp
 MAP_kinase-activated_protein_kinase_2_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008360 P regulation of cell shape
GO:0009651 P response to salt stress
GO:0009931 F calcium-dependent protein serine/threonine kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0045793 P positive regulation of cell size
GO:0046328 P regulation of JNK cascade
GO:0046777 P protein autophosphorylation
3547 O_BomoMSG13193_3prime_partial:A_BomoMSG_c24234_g1_i3
283bp
 MAP_kinase-activated_protein_kinase_2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008360 P regulation of cell shape
GO:0009651 P response to salt stress
GO:0009931 F calcium-dependent protein serine/threonine kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0045793 P positive regulation of cell size
GO:0046328 P regulation of JNK cascade
GO:0046777 P protein autophosphorylation
3548 O_BomoMSG13194_5prime_partial:A_BomoMSG_c24234_g1_i4
195bp
 MAP_kinase-activated_protein_kinase_2_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008360 P regulation of cell shape
GO:0009651 P response to salt stress
GO:0009931 F calcium-dependent protein serine/threonine kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0045793 P positive regulation of cell size
GO:0046328 P regulation of JNK cascade
GO:0046777 P protein autophosphorylation
3549 O_BomoMSG13195_5prime_partial:A_BomoMSG_c24234_g1_i6
287bp
 MAP_kinase-activated_protein_kinase_2_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008360 P regulation of cell shape
GO:0009651 P response to salt stress
GO:0009931 F calcium-dependent protein serine/threonine kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0045793 P positive regulation of cell size
GO:0046328 P regulation of JNK cascade
GO:0046777 P protein autophosphorylation
3550 O_BomoMSG13196_internal:A_BomoMSG_c24234_g1_i7
151bp
 MAP_kinase-activated_protein_kinase_2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008360 P regulation of cell shape
GO:0009651 P response to salt stress
GO:0009931 F calcium-dependent protein serine/threonine kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0045793 P positive regulation of cell size
GO:0046328 P regulation of JNK cascade
GO:0046777 P protein autophosphorylation
3551 O_BomoMSG13197_complete:A_BomoMSG_c24235_g1_i1
187bp
 transmembrane_protein_222_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3552 O_BomoMSG13198_complete:A_BomoMSG_c24237_g1_i1
240bp
 protein_grindelwald_[Bombyx_mori]
GO:0005031 F tumor necrosis factor-activated receptor activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0046330 P positive regulation of JNK cascade
GO:2001235 P positive regulation of apoptotic signaling pathway
3553 O_BomoMSG13199_complete:A_BomoMSG_c24238_g1_i1
1059bp
 exportin-1_[Bombyx_mori]
GO:0000055 P ribosomal large subunit export from nucleus
GO:0000056 P ribosomal small subunit export from nucleus
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000776 C kinetochore
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005642 C annulate lamellae
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0010824 P regulation of centrosome duplication
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0042176 P regulation of protein catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0046825 P regulation of protein export from nucleus
GO:0051028 P mRNA transport
3554 O_BomoMSG1319_5prime_partial:A_BomoMSG_c6010_g1_i1
179bp
3555 O_BomoMSG131_5prime_partial:A_BomoMSG_c481_g1_i1
121bp
3556 O_BomoMSG13200_complete:A_BomoMSG_c24238_g1_i1
125bp
3557 O_BomoMSG13201_complete:A_BomoMSG_c24238_g1_i1
107bp
 hypothetical_protein_AX774_g1318_[Zancudomyces_culisetae]
3558 O_BomoMSG13202_complete:A_BomoMSG_c24239_g1_i1
937bp
 conserved_oligomeric_Golgi_complex_subunit_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000301 P retrograde transport, vesicle recycling within Golgi
GO:0003674 F molecular_function
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0007030 P Golgi organization
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
3559 O_BomoMSG13203_complete:A_BomoMSG_c24240_g1_i1
283bp
 uncharacterized_protein_LOC101743079_isoform_X1_[Bombyx_mori]
3560 O_BomoMSG13204_complete:A_BomoMSG_c24240_g1_i2
341bp
 uncharacterized_protein_LOC101743079_isoform_X1_[Bombyx_mori]
3561 O_BomoMSG13205_3prime_partial:A_BomoMSG_c24241_g1_i1
523bp
 protein_wntless_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0017147 F Wnt-protein binding
GO:0030054 C cell junction
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0030285 C integral component of synaptic vesicle membrane
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031228 C intrinsic component of Golgi membrane
GO:0031302 C intrinsic component of endosome membrane
GO:0031594 C neuromuscular junction
GO:0033157 P regulation of intracellular protein transport
GO:0042734 C presynaptic membrane
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0050714 P positive regulation of protein secretion
3562 O_BomoMSG13206_internal:A_BomoMSG_c24241_g1_i2
182bp
 protein_wntless_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0017147 F Wnt-protein binding
GO:0030054 C cell junction
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0030285 C integral component of synaptic vesicle membrane
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031228 C intrinsic component of Golgi membrane
GO:0031302 C intrinsic component of endosome membrane
GO:0031594 C neuromuscular junction
GO:0033157 P regulation of intracellular protein transport
GO:0042734 C presynaptic membrane
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0050714 P positive regulation of protein secretion
3563 O_BomoMSG13207_5prime_partial:A_BomoMSG_c24242_g1_i1
406bp
 carnosine_N-methyltransferase_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030735 F carnosine N-methyltransferase activity
GO:0032259 P methylation
GO:0035498 P carnosine metabolic process
3564 O_BomoMSG13208_complete:A_BomoMSG_c24242_g1_i1
124bp
3565 O_BomoMSG13209_internal:A_BomoMSG_c24242_g1_i3
171bp
 carnosine_N-methyltransferase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030735 F carnosine N-methyltransferase activity
GO:0032259 P methylation
GO:0035498 P carnosine metabolic process
3566 O_BomoMSG1320_complete:A_BomoMSG_c6010_g1_i1
109bp
3567 O_BomoMSG13210_internal:A_BomoMSG_c24243_g1_i1
719bp
 protein_toll_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0002229 P defense response to oomycetes
GO:0002376 P immune system process
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007416 P synapse assembly
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0009617 P response to bacterium
GO:0009620 P response to fungus
GO:0009880 P embryonic pattern specification
GO:0009897 C external side of plasma membrane
GO:0009950 P dorsal/ventral axis specification
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016201 P synaptic target inhibition
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0019955 F cytokine binding
GO:0030097 P hemopoiesis
GO:0032154 C cleavage furrow
GO:0035007 P regulation of melanization defense response
GO:0035172 P hemocyte proliferation
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045087 P innate immune response
GO:0045610 P regulation of hemocyte differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
GO:0070976 F TIR domain binding
GO:1902875 P regulation of embryonic pattern specification
3568 O_BomoMSG13211_5prime_partial:A_BomoMSG_c24243_g1_i1
416bp
3569 O_BomoMSG13212_complete:A_BomoMSG_c24243_g1_i1
116bp
3570 O_BomoMSG13213_complete:A_BomoMSG_c24243_g1_i1
113bp
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