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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3451 O_BomoMSG13106_5prime_partial:A_BomoMSG_c24187_g1_i1
219bp
 zinc_finger_protein_37_homolog_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
3452 O_BomoMSG13107_complete:A_BomoMSG_c24187_g1_i2
584bp
 zinc_finger_protein_37_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
3453 O_BomoMSG13108_complete:A_BomoMSG_c24187_g1_i2
163bp
3454 O_BomoMSG13109_3prime_partial:A_BomoMSG_c24188_g1_i1
405bp
 zinc_finger_protein_287_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
3455 O_BomoMSG1310_internal:A_BomoMSG_c5951_g1_i1
108bp
 fragile_X_mental_retardation_syndrome-related_protein_1_homolog_A-like_[Bombyx_mori]
3456 O_BomoMSG13110_complete:A_BomoMSG_c24188_g1_i1
132bp
3457 O_BomoMSG13111_internal:A_BomoMSG_c24188_g1_i2
242bp
 zinc_finger_protein_287_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3458 O_BomoMSG13112_internal:A_BomoMSG_c24188_g1_i3
400bp
 zinc_finger_protein_287_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
3459 O_BomoMSG13113_5prime_partial:A_BomoMSG_c24190_g1_i1
226bp
 uncharacterized_protein_LOC101746704_isoform_X2_[Bombyx_mori]
3460 O_BomoMSG13114_3prime_partial:A_BomoMSG_c24191_g1_i1
167bp
 PREDICTED:_uncharacterized_protein_LOC103575525_[Microplitis_demolitor]
3461 O_BomoMSG13115_5prime_partial:A_BomoMSG_c24191_g1_i1
142bp
 PREDICTED:_uncharacterized_protein_LOC105281885_[Ooceraea_biroi]
GO:0005634 C nucleus
3462 O_BomoMSG13116_3prime_partial:A_BomoMSG_c24192_g1_i1
173bp
 ATP-dependent_DNA_helicase_PIF1_[Bombyx_mori]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005657 C replication fork
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010521 F telomerase inhibitor activity
GO:0016787 F hydrolase activity
GO:0032211 P negative regulation of telomere maintenance via telomerase
GO:0032508 P DNA duplex unwinding
GO:0043141 F 5'-3' DNA helicase activity
GO:0044806 P G-quadruplex DNA unwinding
GO:0051974 P negative regulation of telomerase activity
3463 O_BomoMSG13117_complete:A_BomoMSG_c24192_g1_i1
119bp
3464 O_BomoMSG13118_complete:A_BomoMSG_c24193_g1_i1
182bp
 uncharacterized_protein_LOC101740946_[Bombyx_mori]
3465 O_BomoMSG13119_complete:A_BomoMSG_c24193_g1_i2
146bp
 uncharacterized_protein_LOC101740946_[Bombyx_mori]
3466 O_BomoMSG1311_5prime_partial:A_BomoMSG_c5951_g1_i1
102bp
3467 O_BomoMSG13120_complete:A_BomoMSG_c24193_g1_i3
227bp
 uncharacterized_protein_LOC101740946_[Bombyx_mori]
3468 O_BomoMSG13121_complete:A_BomoMSG_c24193_g1_i4
227bp
 uncharacterized_protein_LOC101740946_[Bombyx_mori]
3469 O_BomoMSG13122_3prime_partial:A_BomoMSG_c24194_g2_i1
357bp
 dnaJ_homolog_subfamily_C_member_28_[Bombyx_mori]
GO:0000301 P retrograde transport, vesicle recycling within Golgi
GO:0005515 F protein binding
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0007030 P Golgi organization
GO:0017119 C Golgi transport complex
GO:0048213 P Golgi vesicle prefusion complex stabilization
3470 O_BomoMSG13123_5prime_partial:A_BomoMSG_c24195_g2_i2
218bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743043_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0021915 P neural tube development
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045335 C phagocytic vesicle
GO:0061734 P parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1903599 P positive regulation of autophagy of mitochondrion
GO:2000785 P regulation of autophagosome assembly
3471 O_BomoMSG13124_complete:A_BomoMSG_c24195_g2_i2
134bp
3472 O_BomoMSG13125_5prime_partial:A_BomoMSG_c24196_g1_i1
530bp
 PREDICTED:_uncharacterized_protein_LOC106140037_[Amyelois_transitella]
3473 O_BomoMSG13126_complete:A_BomoMSG_c24196_g1_i1
118bp
3474 O_BomoMSG13127_complete:A_BomoMSG_c24197_g1_i1
337bp
 protein_O-mannosyltransferase_1_isoform_X1_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007385 P specification of segmental identity, abdomen
GO:0007517 P muscle organ development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0035269 P protein O-linked mannosylation
GO:0097502 P mannosylation
3475 O_BomoMSG13128_3prime_partial:A_BomoMSG_c24197_g1_i1
231bp
 protein_O-mannosyltransferase_1_isoform_X2_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007385 P specification of segmental identity, abdomen
GO:0007517 P muscle organ development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0035269 P protein O-linked mannosylation
GO:0097502 P mannosylation
3476 O_BomoMSG13129_complete:A_BomoMSG_c24197_g1_i2
205bp
 protein_O-mannosyltransferase_1_isoform_X1_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007385 P specification of segmental identity, abdomen
GO:0007517 P muscle organ development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0035269 P protein O-linked mannosylation
GO:0097502 P mannosylation
3477 O_BomoMSG1312_internal:A_BomoMSG_c5958_g1_i1
101bp
 transcription_termination_factor_2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006353 P DNA-templated transcription, termination
GO:0006355 P regulation of transcription, DNA-templated
GO:0007143 P female meiotic nuclear division
GO:0007283 P spermatogenesis
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0016787 F hydrolase activity
GO:0034454 P microtubule anchoring at centrosome
3478 O_BomoMSG13130_complete:A_BomoMSG_c24197_g1_i3
390bp
 protein_O-mannosyltransferase_1_isoform_X1_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007385 P specification of segmental identity, abdomen
GO:0007517 P muscle organ development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0035269 P protein O-linked mannosylation
GO:0097502 P mannosylation
3479 O_BomoMSG13131_3prime_partial:A_BomoMSG_c24197_g1_i3
231bp
 protein_O-mannosyltransferase_1_isoform_X2_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007385 P specification of segmental identity, abdomen
GO:0007517 P muscle organ development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0035269 P protein O-linked mannosylation
GO:0097502 P mannosylation
3480 O_BomoMSG13132_5prime_partial:A_BomoMSG_c24198_g1_i1
105bp
 protein_RMD5_homolog_B_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
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