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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1951 O_BomoMSG11757_3prime_partial:A_BomoMSG_c23438_g1_i2
191bp
 carboxyl/cholinesterase_4B_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
1952 O_BomoMSG11758_internal:A_BomoMSG_c23440_g1_i1
143bp
 titin2_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005863 C striated muscle myosin thick filament
GO:0005875 C microtubule associated complex
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0007522 P visceral muscle development
GO:0007525 P somatic muscle development
GO:0008307 F structural constituent of muscle
GO:0016203 P muscle attachment
GO:0019233 P sensory perception of pain
GO:0030017 C sarcomere
GO:0030018 C Z disc
GO:0031674 C I band
GO:0035206 P regulation of hemocyte proliferation
GO:0040011 P locomotion
GO:0045214 P sarcomere organization
GO:0051301 P cell division
1953 O_BomoMSG11759_3prime_partial:A_BomoMSG_c23443_g1_i1
147bp
 diphthine_methyltransferase_isoform_X1_[Bombyx_mori]
GO:0016787 F hydrolase activity
GO:0017183 P peptidyl-diphthamide biosynthetic process from peptidyl-histidine
GO:0061685 F diphthine methylesterase activity
1954 O_BomoMSG1175_complete:A_BomoMSG_c5481_g1_i1
508bp
 putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
1955 O_BomoMSG11760_complete:A_BomoMSG_c23443_g1_i2
117bp
 Cyclin-dependent_kinase_2_[Operophtera_brumata]
GO:0001701 P in utero embryonic development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0048471 C perinuclear region of cytoplasm
GO:0060325 P face morphogenesis
GO:0070182 F DNA polymerase binding
1956 O_BomoMSG11761_5prime_partial:A_BomoMSG_c23443_g1_i3
100bp
 Cyclin-dependent_kinase_2_[Operophtera_brumata]
GO:0001701 P in utero embryonic development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0048471 C perinuclear region of cytoplasm
GO:0060325 P face morphogenesis
GO:0070182 F DNA polymerase binding
1957 O_BomoMSG11762_complete:A_BomoMSG_c23444_g1_i1
193bp
 calcium_and_integrin-binding_protein_1-like_isoform_X1_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005927 C muscle tendon junction
GO:0005929 C cilium
GO:0007204 P positive regulation of cytosolic calcium ion concentration
GO:0016020 C membrane
GO:0031594 C neuromuscular junction
GO:0032403 F protein-containing complex binding
GO:0032420 C stereocilium
GO:0042383 C sarcolemma
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045494 P photoreceptor cell maintenance
GO:0046872 F metal ion binding
GO:0055074 P calcium ion homeostasis
GO:0071318 P cellular response to ATP
GO:0072562 C blood microparticle
1958 O_BomoMSG11763_complete:A_BomoMSG_c23444_g1_i2
193bp
 calcium_and_integrin-binding_protein_1-like_isoform_X1_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005927 C muscle tendon junction
GO:0005929 C cilium
GO:0007204 P positive regulation of cytosolic calcium ion concentration
GO:0016020 C membrane
GO:0031594 C neuromuscular junction
GO:0032403 F protein-containing complex binding
GO:0032420 C stereocilium
GO:0042383 C sarcolemma
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045494 P photoreceptor cell maintenance
GO:0046872 F metal ion binding
GO:0055074 P calcium ion homeostasis
GO:0071318 P cellular response to ATP
GO:0072562 C blood microparticle
1959 O_BomoMSG11764_complete:A_BomoMSG_c23445_g1_i1
281bp
 alpha-tocopherol_transfer_protein-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016020 C membrane
1960 O_BomoMSG11765_internal:A_BomoMSG_c23446_g1_i1
323bp
 Gag-pol_polyprotein,_partial_[Operophtera_brumata]
1961 O_BomoMSG11766_internal:A_BomoMSG_c23447_g1_i1
328bp
 histone_acetyltransferase_Tip60_isoform_X1_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043967 P histone H4 acetylation
GO:0048167 P regulation of synaptic plasticity
GO:2000331 P regulation of terminal button organization
1962 O_BomoMSG11767_internal:A_BomoMSG_c23447_g1_i2
194bp
 histone_acetyltransferase_Tip60_isoform_X1_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043967 P histone H4 acetylation
GO:0048167 P regulation of synaptic plasticity
GO:2000331 P regulation of terminal button organization
1963 O_BomoMSG11768_internal:A_BomoMSG_c23447_g1_i3
324bp
 histone_acetyltransferase_Tip60_isoform_X4_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043967 P histone H4 acetylation
GO:0048167 P regulation of synaptic plasticity
GO:2000331 P regulation of terminal button organization
1964 O_BomoMSG11769_5prime_partial:A_BomoMSG_c23448_g1_i1
147bp
1965 O_BomoMSG1176_3prime_partial:A_BomoMSG_c5483_g1_i1
180bp
 gastrula_zinc_finger_protein_XlCGF52.1_isoform_X1_[Bombyx_mori]
1966 O_BomoMSG11770_5prime_partial:A_BomoMSG_c23448_g1_i1
130bp
 enhancer_of_mRNA-decapping_protein_3_[Bombyx_mori]
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
1967 O_BomoMSG11771_3prime_partial:A_BomoMSG_c23449_g1_i1
335bp
 transmembrane_protein_68_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016746 F acyltransferase activity
1968 O_BomoMSG11772_complete:A_BomoMSG_c23450_g1_i1
892bp
 WD_repeat-containing_protein_36_isoform_X1_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0007601 P visual perception
GO:0008150 P biological_process
GO:0030516 P regulation of axon extension
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0050896 P response to stimulus
1969 O_BomoMSG11773_complete:A_BomoMSG_c23450_g1_i1
162bp
1970 O_BomoMSG11774_complete:A_BomoMSG_c23450_g1_i1
110bp
1971 O_BomoMSG11775_5prime_partial:A_BomoMSG_c23451_g1_i1
295bp
 LOW_QUALITY_PROTEIN:_neurobeachin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007528 P neuromuscular junction development
GO:0007614 P short-term memory
GO:0008104 P protein localization
GO:0008355 P olfactory learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016319 P mushroom body development
GO:0042462 P eye photoreceptor cell development
GO:0042675 P compound eye cone cell differentiation
GO:0043025 C neuronal cell body
GO:0043204 C perikaryon
GO:0051018 F protein kinase A binding
1972 O_BomoMSG11776_internal:A_BomoMSG_c23454_g1_i1
411bp
 histone-lysine_N-methyltransferase,_H3_lysine-79_specific_isoform_X6_[Bombyx_mori]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006348 P subtelomeric heterochromatin assembly
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030702 P pericentric heterochromatin assembly
GO:0031151 F histone methyltransferase activity (H3-K79 specific)
GO:0032259 P methylation
GO:0034729 P histone H3-K79 methylation
GO:0035097 C histone methyltransferase complex
GO:0046331 P lateral inhibition
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051726 P regulation of cell cycle
GO:2000637 P positive regulation of gene silencing by miRNA
1973 O_BomoMSG11777_3prime_partial:A_BomoMSG_c23455_g1_i1
491bp
 importin_subunit_alpha-5_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
1974 O_BomoMSG11778_complete:A_BomoMSG_c23455_g1_i1
122bp
1975 O_BomoMSG11779_internal:A_BomoMSG_c23455_g1_i2
141bp
 importin_subunit_alpha-5_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0042826 F histone deacetylase binding
GO:0044822 F RNA binding
1976 O_BomoMSG1177_complete:A_BomoMSG_c5485_g1_i1
524bp
 glucosidase_2_subunit_beta-like_[Bombyx_mori]
GO:0005080 F protein kinase C binding
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006457 P protein folding
GO:0006491 P N-glycan processing
GO:0035556 P intracellular signal transduction
GO:0044325 F transmembrane transporter binding
GO:0046872 F metal ion binding
GO:0051219 F phosphoprotein binding
1977 O_BomoMSG11780_internal:A_BomoMSG_c23456_g1_i1
284bp
 proton-coupled_folate_transporter_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
1978 O_BomoMSG11781_internal:A_BomoMSG_c23457_g1_i1
184bp
 uncharacterized_protein_C1orf131_homolog_[Bombyx_mori]
GO:0044822 F RNA binding
1979 O_BomoMSG11782_3prime_partial:A_BomoMSG_c23458_g1_i1
274bp
 FAST_kinase_domain-containing_protein_5,_mitochondrial_[Bombyx_mori]
1980 O_BomoMSG11783_3prime_partial:A_BomoMSG_c23458_g1_i2
274bp
 FAST_kinase_domain-containing_protein_5,_mitochondrial_[Bombyx_mori]
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