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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
12571 O_BomoMSG21314_5prime_partial:A_BomoMSG_c26885_g1_i2
107bp
12572 O_BomoMSG21315_complete:A_BomoMSG_c26885_g1_i3
382bp
 bifunctional_3'-phosphoadenosine_5'-phosphosulfate_synthase_isoform_X2_[Bombyx_mori]
GO:0000103 P sulfate assimilation
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004020 F adenylylsulfate kinase activity
GO:0004781 F sulfate adenylyltransferase (ATP) activity
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
12573 O_BomoMSG21316_complete:A_BomoMSG_c26885_g1_i3
147bp
12574 O_BomoMSG21317_5prime_partial:A_BomoMSG_c26885_g1_i3
120bp
12575 O_BomoMSG21318_complete:A_BomoMSG_c26885_g1_i3
111bp
12576 O_BomoMSG21319_3prime_partial:A_BomoMSG_c26885_g1_i4
300bp
 bifunctional_3'-phosphoadenosine_5'-phosphosulfate_synthase_isoform_X2_[Bombyx_mori]
GO:0000103 P sulfate assimilation
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004020 F adenylylsulfate kinase activity
GO:0004781 F sulfate adenylyltransferase (ATP) activity
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
12577 O_BomoMSG2131_internal:A_BomoMSG_c10146_g1_i1
439bp
 rotatin_isoform_X2_[Bombyx_mori]
12578 O_BomoMSG21320_complete:A_BomoMSG_c26886_g1_i1
825bp
 spermatogenesis-associated_protein_20_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0030154 P cell differentiation
12579 O_BomoMSG21321_complete:A_BomoMSG_c26886_g1_i2
820bp
 spermatogenesis-associated_protein_20_isoform_X2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0030154 P cell differentiation
12580 O_BomoMSG21322_5prime_partial:A_BomoMSG_c26888_g1_i2
397bp
 protein_IWS1_homolog_[Bombyx_mori]
12581 O_BomoMSG21323_complete:A_BomoMSG_c26888_g1_i2
175bp
12582 O_BomoMSG21324_3prime_partial:A_BomoMSG_c26889_g2_i1
176bp
 methyltransferase_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
12583 O_BomoMSG21325_complete:A_BomoMSG_c26889_g2_i1
114bp
 SOSS_complex_subunit_C_homolog_B_[Helicoverpa_armigera]
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0070876 C SOSS complex
12584 O_BomoMSG21326_3prime_partial:A_BomoMSG_c26890_g1_i1
201bp
 phosphatidylinositol_4-kinase_type_2-alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031083 C BLOC-1 complex
GO:0031224 C intrinsic component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0035651 F AP-3 adaptor complex binding
GO:0035838 C growing cell tip
GO:0042734 C presynaptic membrane
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0044231 C host cell presynaptic membrane
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
12585 O_BomoMSG21327_3prime_partial:A_BomoMSG_c26890_g1_i2
265bp
 phosphatidylinositol_4-kinase_type_2-alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031083 C BLOC-1 complex
GO:0031224 C intrinsic component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0035651 F AP-3 adaptor complex binding
GO:0035838 C growing cell tip
GO:0042734 C presynaptic membrane
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0044231 C host cell presynaptic membrane
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
12586 O_BomoMSG21328_internal:A_BomoMSG_c26890_g1_i3
105bp
 phosphatidylinositol_4-kinase_type_2-alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031083 C BLOC-1 complex
GO:0031224 C intrinsic component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0035651 F AP-3 adaptor complex binding
GO:0035838 C growing cell tip
GO:0042734 C presynaptic membrane
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0044231 C host cell presynaptic membrane
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
12587 O_BomoMSG21329_5prime_partial:A_BomoMSG_c26890_g2_i1
156bp
 phosphatidylinositol_4-kinase_type_2-alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
12588 O_BomoMSG2132_5prime_partial:A_BomoMSG_c10146_g1_i1
234bp
12589 O_BomoMSG21330_internal:A_BomoMSG_c26890_g1_i4
305bp
 phosphatidylinositol_4-kinase_type_2-alpha_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031083 C BLOC-1 complex
GO:0031224 C intrinsic component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0035651 F AP-3 adaptor complex binding
GO:0035838 C growing cell tip
GO:0042734 C presynaptic membrane
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0044231 C host cell presynaptic membrane
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
12590 O_BomoMSG21331_internal:A_BomoMSG_c26891_g1_i1
116bp
 reverse_transcriptase_-_silkworm_transposon_Pao
12591 O_BomoMSG21332_internal:A_BomoMSG_c26891_g1_i1
116bp
12592 O_BomoMSG21333_3prime_partial:A_BomoMSG_c26892_g1_i1
679bp
 WD_repeat-containing_protein_3-like_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0031965 C nuclear membrane
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
12593 O_BomoMSG21334_complete:A_BomoMSG_c26892_g1_i1
172bp
12594 O_BomoMSG21335_5prime_partial:A_BomoMSG_c26892_g1_i1
119bp
12595 O_BomoMSG21336_internal:A_BomoMSG_c26893_g1_i1
114bp
12596 O_BomoMSG21337_complete:A_BomoMSG_c26893_g2_i1
146bp
 Pol_protein_[Bombyx_mori]
12597 O_BomoMSG21338_complete:A_BomoMSG_c26893_g2_i1
112bp
 uncharacterized_protein_LOC101735388_[Bombyx_mori]
12598 O_BomoMSG21339_5prime_partial:A_BomoMSG_c26893_g2_i2
231bp
 Pol_protein_[Bombyx_mori]
12599 O_BomoMSG2133_internal:A_BomoMSG_c10150_g1_i1
233bp
 protein_vav_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007391 P dorsal closure
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007424 P open tracheal system development
GO:0007520 P myoblast fusion
GO:0008360 P regulation of cell shape
GO:0016477 P cell migration
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031532 P actin cytoskeleton reorganization
GO:0035011 P melanotic encapsulation of foreign target
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0072499 P photoreceptor cell axon guidance
GO:0090630 P activation of GTPase activity
12600 O_BomoMSG21340_complete:A_BomoMSG_c26893_g2_i2
112bp
 uncharacterized_protein_LOC101735388_[Bombyx_mori]
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