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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
10051 O_BomoMSG19047_5prime_partial:A_BomoMSG_c26329_g1_i4
107bp
10052 O_BomoMSG19048_complete:A_BomoMSG_c26329_g1_i4
104bp
10053 O_BomoMSG19049_complete:A_BomoMSG_c26330_g1_i1
510bp
 TGF-beta_receptor_type-1_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000186 P obsolete activation of MAPKK activity
GO:0001501 P skeletal system development
GO:0001525 P angiogenesis
GO:0001701 P in utero embryonic development
GO:0001822 P kidney development
GO:0001824 P blastocyst development
GO:0001837 P epithelial to mesenchymal transition
GO:0001937 P negative regulation of endothelial cell proliferation
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0002088 P lens development in camera-type eye
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004675 F transmembrane receptor protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005024 F transforming growth factor beta-activated receptor activity
GO:0005025 F transforming growth factor beta receptor activity, type I
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005102 F signaling receptor binding
GO:0005114 F type II transforming growth factor beta receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005623 C obsolete cell
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0005923 C bicellular tight junction
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007178 P transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007507 P heart development
GO:0008284 P positive regulation of cell population proliferation
GO:0008354 P germ cell migration
GO:0008584 P male gonad development
GO:0009791 P post-embryonic development
GO:0009952 P anterior/posterior pattern specification
GO:0009986 C cell surface
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019838 F growth factor binding
GO:0023014 P signal transduction
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030199 P collagen fibril organization
GO:0030307 P positive regulation of cell growth
GO:0030335 P positive regulation of cell migration
GO:0031396 P regulation of protein ubiquitination
GO:0032331 P negative regulation of chondrocyte differentiation
GO:0032924 P activin receptor signaling pathway
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0042118 P endothelial cell activation
GO:0043066 P negative regulation of apoptotic process
GO:0043235 C receptor complex
GO:0043393 P regulation of protein binding
GO:0043542 P endothelial cell migration
GO:0045121 C membrane raft
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0048538 P thymus development
GO:0048663 P neuron fate commitment
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0048705 P skeletal system morphogenesis
GO:0048762 P mesenchymal cell differentiation
GO:0048844 P artery morphogenesis
GO:0048870 P cell motility
GO:0050431 F transforming growth factor beta binding
GO:0051272 P positive regulation of cellular component movement
GO:0051491 P positive regulation of filopodium assembly
GO:0051897 P positive regulation of protein kinase B signaling
GO:0060017 P parathyroid gland development
GO:0060021 P roof of mouth development
GO:0060037 P pharyngeal system development
GO:0060317 P cardiac epithelial to mesenchymal transition
GO:0060389 P pathway-restricted SMAD protein phosphorylation
GO:0060391 P positive regulation of SMAD protein signal transduction
GO:0070411 F I-SMAD binding
GO:0070723 P response to cholesterol
GO:0071560 P cellular response to transforming growth factor beta stimulus
GO:2001235 P positive regulation of apoptotic signaling pathway
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
10054 O_BomoMSG1904_5prime_partial:A_BomoMSG_c9359_g1_i1
141bp
 uncharacterized_protein_LOC110386478_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
10055 O_BomoMSG19050_5prime_partial:A_BomoMSG_c26330_g1_i2
428bp
 TGF-beta_receptor_type-1_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004675 F transmembrane receptor protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005025 F transforming growth factor beta receptor activity, type I
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0005923 C bicellular tight junction
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007178 P transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007507 P heart development
GO:0007566 P embryo implantation
GO:0007568 P aging
GO:0009636 P response to toxic substance
GO:0009986 C cell surface
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030324 P lung development
GO:0031100 P animal organ regeneration
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0032924 P activin receptor signaling pathway
GO:0034695 P response to prostaglandin E
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0042118 P endothelial cell activation
GO:0043234 C protein-containing complex
GO:0043627 P response to estrogen
GO:0045121 C membrane raft
GO:0045602 P negative regulation of endothelial cell differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0048565 P digestive tract development
GO:0048762 P mesenchymal cell differentiation
GO:0050431 F transforming growth factor beta binding
GO:0051602 P response to electrical stimulus
GO:0060317 P cardiac epithelial to mesenchymal transition
GO:0070022 C obsolete transforming growth factor beta receptor complex
10056 O_BomoMSG19051_complete:A_BomoMSG_c26330_g1_i3
404bp
 TGF-beta_receptor_type-1_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004675 F transmembrane receptor protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005025 F transforming growth factor beta receptor activity, type I
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0005923 C bicellular tight junction
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007178 P transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007507 P heart development
GO:0007566 P embryo implantation
GO:0007568 P aging
GO:0009636 P response to toxic substance
GO:0009986 C cell surface
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0023014 P signal transduction
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030324 P lung development
GO:0031100 P animal organ regeneration
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0032924 P activin receptor signaling pathway
GO:0034695 P response to prostaglandin E
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0042118 P endothelial cell activation
GO:0043234 C protein-containing complex
GO:0043627 P response to estrogen
GO:0045121 C membrane raft
GO:0045602 P negative regulation of endothelial cell differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0048565 P digestive tract development
GO:0048762 P mesenchymal cell differentiation
GO:0050431 F transforming growth factor beta binding
GO:0051602 P response to electrical stimulus
GO:0060317 P cardiac epithelial to mesenchymal transition
GO:0070022 C obsolete transforming growth factor beta receptor complex
10057 O_BomoMSG19052_5prime_partial:A_BomoMSG_c26331_g1_i1
102bp
10058 O_BomoMSG19053_5prime_partial:A_BomoMSG_c26331_g1_i2
102bp
10059 O_BomoMSG19054_3prime_partial:A_BomoMSG_c26332_g1_i1
264bp
 WD_repeat-containing_protein_74_[Bombyx_mori]
GO:0001825 P blastocyst formation
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0016070 P RNA metabolic process
GO:0030687 C preribosome, large subunit precursor
GO:0042273 P ribosomal large subunit biogenesis
10060 O_BomoMSG19055_internal:A_BomoMSG_c26332_g1_i2
141bp
 WD_repeat-containing_protein_74_[Bombyx_mori]
GO:0001825 P blastocyst formation
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0016070 P RNA metabolic process
GO:0030687 C preribosome, large subunit precursor
GO:0042273 P ribosomal large subunit biogenesis
10061 O_BomoMSG19056_complete:A_BomoMSG_c26333_g1_i1
378bp
 carbohydrate_sulfotransferase_11_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001537 F N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0002063 P chondrocyte development
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0007585 P respiratory gaseous exchange by respiratory system
GO:0008146 F sulfotransferase activity
GO:0009791 P post-embryonic development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016051 P carbohydrate biosynthetic process
GO:0016740 F transferase activity
GO:0030204 P chondroitin sulfate metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030326 P embryonic limb morphogenesis
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0033037 P polysaccharide localization
GO:0036342 P post-anal tail morphogenesis
GO:0042127 P regulation of cell population proliferation
GO:0042733 P embryonic digit morphogenesis
GO:0043066 P negative regulation of apoptotic process
GO:0047756 F chondroitin 4-sulfotransferase activity
GO:0048589 P developmental growth
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0048704 P embryonic skeletal system morphogenesis
GO:0050659 F N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
GO:0051216 P cartilage development
10062 O_BomoMSG19057_complete:A_BomoMSG_c26334_g1_i1
382bp
 pentatricopeptide_repeat-containing_protein_2,_mitochondrial_[Bombyx_mori]
GO:0001822 P kidney development
GO:0001889 P liver development
GO:0005739 C mitochondrion
GO:0006397 P mRNA processing
GO:0007005 P mitochondrion organization
GO:0007507 P heart development
GO:0010468 P regulation of gene expression
GO:0044822 F RNA binding
GO:0048747 P muscle cell development
GO:0050684 P regulation of mRNA processing
GO:0055010 P ventricular cardiac muscle tissue morphogenesis
10063 O_BomoMSG19058_5prime_partial:A_BomoMSG_c26334_g1_i2
279bp
 pentatricopeptide_repeat-containing_protein_2,_mitochondrial_[Bombyx_mori]
GO:0001822 P kidney development
GO:0001889 P liver development
GO:0005739 C mitochondrion
GO:0006397 P mRNA processing
GO:0007005 P mitochondrion organization
GO:0007507 P heart development
GO:0010468 P regulation of gene expression
GO:0044822 F RNA binding
GO:0048747 P muscle cell development
GO:0050684 P regulation of mRNA processing
GO:0055010 P ventricular cardiac muscle tissue morphogenesis
10064 O_BomoMSG19059_internal:A_BomoMSG_c26335_g1_i1
143bp
 zinc_finger_MYM-type_protein_4_[Bombyx_mori]
10065 O_BomoMSG1905_internal:A_BomoMSG_c9363_g1_i1
169bp
 uncharacterized_protein_LOC101746539_[Bombyx_mori]
10066 O_BomoMSG19060_3prime_partial:A_BomoMSG_c26335_g1_i2
630bp
 zinc_finger_MYM-type_protein_4_[Bombyx_mori]
10067 O_BomoMSG19061_complete:A_BomoMSG_c26335_g1_i2
109bp
10068 O_BomoMSG19062_complete:A_BomoMSG_c26336_g2_i2
494bp
 rho_GTPase-activating_protein_8_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
10069 O_BomoMSG19063_complete:A_BomoMSG_c26336_g2_i2
150bp
10070 O_BomoMSG19064_complete:A_BomoMSG_c26337_g1_i1
997bp
 muscle_M-line_assembly_protein_unc-89-like_[Bombyx_mori]
10071 O_BomoMSG19065_complete:A_BomoMSG_c26337_g1_i1
197bp
10072 O_BomoMSG19066_complete:A_BomoMSG_c26337_g1_i1
113bp
10073 O_BomoMSG19067_5prime_partial:A_BomoMSG_c26337_g1_i2
664bp
 muscle_M-line_assembly_protein_unc-89-like_[Bombyx_mori]
10074 O_BomoMSG19068_complete:A_BomoMSG_c26337_g1_i2
197bp
10075 O_BomoMSG19069_complete:A_BomoMSG_c26337_g1_i3
910bp
 muscle_M-line_assembly_protein_unc-89-like_[Bombyx_mori]
10076 O_BomoMSG1906_5prime_partial:A_BomoMSG_c9372_g1_i1
256bp
 patj_homolog_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0032033 F myosin II light chain binding
GO:0034332 P adherens junction organization
GO:0034334 P adherens junction maintenance
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035209 P pupal development
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045494 P photoreceptor cell maintenance
10077 O_BomoMSG19070_complete:A_BomoMSG_c26337_g1_i3
197bp
10078 O_BomoMSG19071_complete:A_BomoMSG_c26337_g1_i3
113bp
10079 O_BomoMSG19072_5prime_partial:A_BomoMSG_c26337_g1_i4
325bp
 muscle_M-line_assembly_protein_unc-89-like_[Bombyx_mori]
10080 O_BomoMSG19073_complete:A_BomoMSG_c26337_g1_i4
197bp
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