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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9871 O_BomoASG18886_complete:A_BomoASG_c30357_g1_i1
308bp
 tRNA_methyltransferase_10_homolog_A,_partial_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
9872 O_BomoASG18887_complete:A_BomoASG_c30358_g1_i1
212bp
 ras-related_and_estrogen-regulated_growth_inhibitor-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
9873 O_BomoASG18888_complete:A_BomoASG_c30358_g1_i2
212bp
 ras-related_and_estrogen-regulated_growth_inhibitor-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
9874 O_BomoASG18889_complete:A_BomoASG_c30358_g1_i2
155bp
9875 O_BomoASG1888_complete:A_BomoASG_c12158_g1_i1
202bp
 peptidyl-tRNA_hydrolase_ICT1,_mitochondrial_[Bombyx_mori]
GO:0003747 F translation release factor activity
GO:0004045 F aminoacyl-tRNA hydrolase activity
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006412 P translation
GO:0006415 P translational termination
GO:0016150 F translation release factor activity, codon nonspecific
GO:0016787 F hydrolase activity
GO:0070126 P mitochondrial translational termination
9876 O_BomoASG18890_3prime_partial:A_BomoASG_c30359_g1_i1
395bp
 multidrug_resistance-associated_protein_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006691 P leukotriene metabolic process
GO:0006810 P transport
GO:0009235 P cobalamin metabolic process
GO:0015420 F ABC-type vitamin B12 transporter activity
GO:0015889 P cobalamin transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0035461 P vitamin transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043225 F ATPase-coupled inorganic anion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:0098656 P anion transmembrane transport
9877 O_BomoASG18891_internal:A_BomoASG_c30359_g1_i2
167bp
 multidrug_resistance-associated_protein_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
9878 O_BomoASG18892_internal:A_BomoASG_c30359_g1_i3
331bp
 multidrug_resistance-associated_protein_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
9879 O_BomoASG18893_complete:A_BomoASG_c30360_g1_i2
149bp
 nuclear_nucleic_acid-binding_protein_C1D-like_[Bombyx_mori]
GO:0000178 C exosome (RNase complex)
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
9880 O_BomoASG18894_5prime_partial:A_BomoASG_c30362_g3_i1
324bp
 hypothetical_protein_[Bacillus_thuringiensis]
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0032502 P developmental process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
9881 O_BomoASG18895_complete:A_BomoASG_c30363_g1_i1
261bp
 ephrin-B2a_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001568 P blood vessel development
GO:0001756 P somitogenesis
GO:0002042 P cell migration involved in sprouting angiogenesis
GO:0003404 P optic vesicle morphogenesis
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008039 P synaptic target recognition
GO:0009952 P anterior/posterior pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021654 P rhombomere boundary formation
GO:0030154 P cell differentiation
GO:0035475 P angioblast cell migration involved in selective angioblast sprouting
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:0050920 P regulation of chemotaxis
9882 O_BomoASG18896_5prime_partial:A_BomoASG_c30365_g1_i1
373bp
 protein_GPR107_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030136 C clathrin-coated vesicle
GO:0032050 F clathrin heavy chain binding
GO:0072583 P clathrin-dependent endocytosis
9883 O_BomoASG18897_complete:A_BomoASG_c30365_g1_i1
105bp
9884 O_BomoASG18898_complete:A_BomoASG_c30365_g1_i2
515bp
 protein_GPR107_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030136 C clathrin-coated vesicle
GO:0032050 F clathrin heavy chain binding
GO:0072583 P clathrin-dependent endocytosis
9885 O_BomoASG18899_complete:A_BomoASG_c30365_g1_i2
105bp
9886 O_BomoASG1889_3prime_partial:A_BomoASG_c12163_g1_i1
207bp
 glutathione_S-transferae_zeta_2_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004364 F glutathione transferase activity
GO:0005737 C cytoplasm
GO:0006559 P L-phenylalanine catabolic process
GO:0006572 P tyrosine catabolic process
GO:0006749 P glutathione metabolic process
GO:0009072 P aromatic amino acid family metabolic process
GO:0016034 F maleylacetoacetate isomerase activity
GO:0016740 F transferase activity
GO:0016853 F isomerase activity
9887 O_BomoASG188_internal:A_BomoASG_c1519_g1_i2
123bp
 uncharacterized_protein_LOC105842463_isoform_X5_[Bombyx_mori]
9888 O_BomoASG18900_5prime_partial:A_BomoASG_c30366_g1_i1
607bp
 nuclear_valosin-containing_protein-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005697 C telomerase holoenzyme complex
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0016020 C membrane
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0051973 P positive regulation of telomerase activity
GO:1990275 F preribosome binding
9889 O_BomoASG18901_complete:A_BomoASG_c30366_g1_i1
113bp
 hypothetical_protein_WY02_14540_[Pseudonocardia_sp._AL041005-10]
9890 O_BomoASG18902_complete:A_BomoASG_c30366_g1_i1
106bp
9891 O_BomoASG18903_5prime_partial:A_BomoASG_c30366_g1_i2
899bp
 nuclear_valosin-containing_protein-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005697 C telomerase holoenzyme complex
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0016020 C membrane
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
GO:0051973 P positive regulation of telomerase activity
GO:1990275 F preribosome binding
9892 O_BomoASG18904_complete:A_BomoASG_c30366_g1_i2
156bp
9893 O_BomoASG18905_complete:A_BomoASG_c30366_g1_i2
113bp
 hypothetical_protein_WY02_14540_[Pseudonocardia_sp._AL041005-10]
9894 O_BomoASG18906_complete:A_BomoASG_c30366_g1_i2
106bp
9895 O_BomoASG18907_complete:A_BomoASG_c30367_g1_i1
339bp
 cyclin_dependent_kinase_7_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005675 C transcription factor TFIIH holo complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006362 P transcription elongation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008022 F protein C-terminus binding
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008283 P cell population proliferation
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030521 P androgen receptor signaling pathway
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048471 C perinuclear region of cytoplasm
GO:0050681 F androgen receptor binding
GO:0051301 P cell division
9896 O_BomoASG18908_complete:A_BomoASG_c30367_g1_i2
339bp
 cyclin_dependent_kinase_7_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005675 C transcription factor TFIIH holo complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006362 P transcription elongation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008022 F protein C-terminus binding
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008283 P cell population proliferation
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030521 P androgen receptor signaling pathway
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048471 C perinuclear region of cytoplasm
GO:0050681 F androgen receptor binding
GO:0051301 P cell division
9897 O_BomoASG18909_5prime_partial:A_BomoASG_c30368_g1_i1
104bp
 4-hydroxybenzoate_polyprenyltransferase,_mitochondrial_[Bombyx_mori]
9898 O_BomoASG1890_3prime_partial:A_BomoASG_c12164_g1_i1
132bp
 UPF0389_protein_CG9231_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
9899 O_BomoASG18910_complete:A_BomoASG_c30368_g1_i2
218bp
 4-hydroxybenzoate_polyprenyltransferase,_mitochondrial_[Bombyx_mori]
GO:0002083 F 4-hydroxybenzoate decaprenyltransferase activity
GO:0004659 F prenyltransferase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0047293 F 4-hydroxybenzoate nonaprenyltransferase activity
9900 O_BomoASG18911_internal:A_BomoASG_c30368_g1_i3
244bp
 4-hydroxybenzoate_polyprenyltransferase,_mitochondrial_[Bombyx_mori]
GO:0002083 F 4-hydroxybenzoate decaprenyltransferase activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0004659 F prenyltransferase activity
GO:0005666 C RNA polymerase III complex
GO:0005736 C RNA polymerase I complex
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006360 P transcription by RNA polymerase I
GO:0006383 P transcription by RNA polymerase III
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0008412 F 4-hydroxybenzoate octaprenyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0047293 F 4-hydroxybenzoate nonaprenyltransferase activity
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