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Search ORF from Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

9421

O_BomoASG18480_5prime_partial:A_BomoASG_c30235_g1_i2

154bp

Bomo_Chr22

HOP_precursor_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0004714	F	transmembrane receptor protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0005886	C	plasma membrane
GO:0006468	P	protein phosphorylation
GO:0007165	P	signal transduction
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275	P	multicellular organism development
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0018108	P	peptidyl-tyrosine phosphorylation
GO:0042052	P	rhabdomere development
GO:0046716	P	muscle cell cellular homeostasis
GO:0072499	P	photoreceptor cell axon guidance

9422

O_BomoASG18481_5prime_partial:A_BomoASG_c30235_g1_i3

367bp

Bomo_Chr22

HOP_precursor_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0004714	F	transmembrane receptor protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0005886	C	plasma membrane
GO:0006468	P	protein phosphorylation
GO:0007165	P	signal transduction
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275	P	multicellular organism development
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0018108	P	peptidyl-tyrosine phosphorylation
GO:0042052	P	rhabdomere development
GO:0046716	P	muscle cell cellular homeostasis
GO:0072499	P	photoreceptor cell axon guidance

9423

O_BomoASG18482_3prime_partial:A_BomoASG_c30236_g1_i1

403bp

Bomo_Chr4

ubiquitin_carboxyl-terminal_hydrolase_CYLD_isoform_X3_[Bombyx_mori]

GO:0004843	F	thiol-dependent deubiquitinase
GO:0005515	F	protein binding
GO:0005737	C	cytoplasm
GO:0005813	C	centrosome
GO:0005815	C	microtubule organizing center
GO:0005819	C	spindle
GO:0005829	C	cytosol
GO:0005856	C	cytoskeleton
GO:0005874	C	microtubule
GO:0005881	C	cytoplasmic microtubule
GO:0005886	C	plasma membrane
GO:0006508	P	proteolysis
GO:0006511	P	ubiquitin-dependent protein catabolic process
GO:0007049	P	cell cycle
GO:0007346	P	regulation of mitotic cell cycle
GO:0008233	F	peptidase activity
GO:0008234	F	cysteine-type peptidase activity
GO:0008270	F	zinc ion binding
GO:0010803	P	regulation of tumor necrosis factor-mediated signaling pathway
GO:0016020	C	membrane
GO:0016055	P	Wnt signaling pathway
GO:0016579	P	protein deubiquitination
GO:0016787	F	hydrolase activity
GO:0019901	F	protein kinase binding
GO:0030496	C	midbody
GO:0031234	C	extrinsic component of cytoplasmic side of plasma membrane
GO:0032088	P	negative regulation of NF-kappaB transcription factor activity
GO:0032480	P	negative regulation of type I interferon production
GO:0036064	C	ciliary basal body
GO:0036459	F	thiol-dependent deubiquitinase
GO:0042347	P	negative regulation of NIK/NF-kappaB signaling
GO:0042995	C	cell projection
GO:0045581	P	negative regulation of T cell differentiation
GO:0046872	F	metal ion binding
GO:0048471	C	perinuclear region of cytoplasm
GO:0061578	F	Lys63-specific deubiquitinase activity
GO:0070064	F	proline-rich region binding
GO:0070266	P	necroptotic process
GO:0070423	P	nucleotide-binding oligomerization domain containing signaling pathway
GO:0070507	P	regulation of microtubule cytoskeleton organization
GO:0070536	P	protein K63-linked deubiquitination
GO:0090090	P	negative regulation of canonical Wnt signaling pathway
GO:0097542	C	ciliary tip
GO:1901026	P	ripoptosome assembly involved in necroptotic process
GO:1902017	P	regulation of cilium assembly
GO:2001238	P	positive regulation of extrinsic apoptotic signaling pathway
GO:2001242	P	regulation of intrinsic apoptotic signaling pathway

9424

O_BomoASG18483_3prime_partial:A_BomoASG_c30236_g1_i2

448bp

Bomo_Chr4

ubiquitin_carboxyl-terminal_hydrolase_CYLD_isoform_X1_[Bombyx_mori]

GO:0004843	F	thiol-dependent deubiquitinase
GO:0005737	C	cytoplasm
GO:0005813	C	centrosome
GO:0005815	C	microtubule organizing center
GO:0005819	C	spindle
GO:0005829	C	cytosol
GO:0005856	C	cytoskeleton
GO:0005874	C	microtubule
GO:0005881	C	cytoplasmic microtubule
GO:0005886	C	plasma membrane
GO:0006508	P	proteolysis
GO:0006511	P	ubiquitin-dependent protein catabolic process
GO:0008233	F	peptidase activity
GO:0008234	F	cysteine-type peptidase activity
GO:0008270	F	zinc ion binding
GO:0016020	C	membrane
GO:0016055	P	Wnt signaling pathway
GO:0016579	P	protein deubiquitination
GO:0016787	F	hydrolase activity
GO:0030496	C	midbody
GO:0032088	P	negative regulation of NF-kappaB transcription factor activity
GO:0036064	C	ciliary basal body
GO:0036459	F	thiol-dependent deubiquitinase
GO:0042347	P	negative regulation of NIK/NF-kappaB signaling
GO:0042995	C	cell projection
GO:0046872	F	metal ion binding
GO:0048471	C	perinuclear region of cytoplasm
GO:0070536	P	protein K63-linked deubiquitination
GO:0090090	P	negative regulation of canonical Wnt signaling pathway
GO:0097542	C	ciliary tip
GO:1902017	P	regulation of cilium assembly

9425

O_BomoASG18484_3prime_partial:A_BomoASG_c30237_g1_i1

220bp

Bomo_Chr23

protein_sarah_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005759	C	mitochondrial matrix
GO:0007005	P	mitochondrion organization
GO:0007049	P	cell cycle
GO:0007126	P	meiotic cell cycle
GO:0007127	P	meiosis I
GO:0007143	P	female meiotic nuclear division
GO:0007275	P	multicellular organism development
GO:0007343	P	egg activation
GO:0007610	P	behavior
GO:0007616	P	long-term memory
GO:0008355	P	olfactory learning
GO:0008597	F	calcium-dependent protein serine/threonine phosphatase regulator activity
GO:0019722	P	calcium-mediated signaling
GO:0030154	P	cell differentiation
GO:0030431	P	sleep
GO:0035039	P	male pronucleus assembly
GO:0045924	P	regulation of female receptivity
GO:0046008	P	regulation of female receptivity, post-mating
GO:0048477	P	oogenesis
GO:0050790	P	regulation of catalytic activity
GO:0051321	P	meiotic cell cycle
GO:0070884	P	regulation of calcineurin-NFAT signaling cascade

9426

O_BomoASG18485_3prime_partial:A_BomoASG_c30238_g1_i1

134bp

Bomo_Chr15

p53_and_DNA_damage-regulated_protein_1_[Bombyx_mori]

GO:0003674	F	molecular_function
GO:0005575	C	cellular_component
GO:0005737	C	cytoplasm
GO:0006457	P	protein folding
GO:0008150	P	biological_process
GO:0016272	C	prefoldin complex
GO:0051082	F	unfolded protein binding

9427

O_BomoASG18486_complete:A_BomoASG_c30238_g1_i2

133bp

Bomo_Chr15

p53_and_DNA_damage-regulated_protein_1_[Bombyx_mori]

GO:0003674	F	molecular_function
GO:0005575	C	cellular_component
GO:0005737	C	cytoplasm
GO:0006457	P	protein folding
GO:0008150	P	biological_process
GO:0016272	C	prefoldin complex
GO:0051082	F	unfolded protein binding

9428

O_BomoASG18487_3prime_partial:A_BomoASG_c30240_g1_i1

399bp

Bomo_Chr23

LOW_QUALITY_PROTEIN:_PHD_and_RING_finger_domain-containing_protein_1_[Bombyx_mori]

GO:0006366	P	transcription by RNA polymerase II
GO:0006397	P	mRNA processing
GO:0008270	F	zinc ion binding
GO:0016020	C	membrane
GO:0019904	F	protein domain specific binding
GO:0046872	F	metal ion binding
GO:0070063	F	RNA polymerase binding

9429

O_BomoASG18488_complete:A_BomoASG_c30240_g1_i1

134bp

Bomo_Chr23

9430

O_BomoASG18489_internal:A_BomoASG_c30240_g1_i2

390bp

Bomo_Chr23

LOW_QUALITY_PROTEIN:_PHD_and_RING_finger_domain-containing_protein_1_[Bombyx_mori]

GO:0006366	P	transcription by RNA polymerase II
GO:0006397	P	mRNA processing
GO:0008270	F	zinc ion binding
GO:0016020	C	membrane
GO:0019904	F	protein domain specific binding
GO:0046872	F	metal ion binding
GO:0070063	F	RNA polymerase binding

9431

O_BomoASG1848_5prime_partial:A_BomoASG_c11934_g1_i1

109bp

Bomo_Chr2

9432

O_BomoASG18490_3prime_partial:A_BomoASG_c30242_g1_i1

1712bp

Bomo_Chr5

LOW_QUALITY_PROTEIN:_kinesin-like_protein_KIF13A_[Bombyx_mori]

GO:0000139	C	Golgi membrane
GO:0000166	F	nucleotide binding
GO:0000910	P	cytokinesis
GO:0003777	F	microtubule motor activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0005768	C	endosome
GO:0005794	C	Golgi apparatus
GO:0005813	C	centrosome
GO:0005815	C	microtubule organizing center
GO:0005856	C	cytoskeleton
GO:0005871	C	kinesin complex
GO:0005874	C	microtubule
GO:0006810	P	transport
GO:0006886	P	intracellular protein transport
GO:0007018	P	microtubule-based movement
GO:0007049	P	cell cycle
GO:0008017	F	microtubule binding
GO:0008152	P	metabolic process
GO:0008333	P	endosome to lysosome transport
GO:0010008	C	endosome membrane
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016887	F	ATP hydrolysis activity
GO:0030496	C	midbody
GO:0032438	P	melanosome organization
GO:0032588	C	trans-Golgi network membrane
GO:0035459	P	vesicle cargo loading
GO:0043001	P	Golgi to plasma membrane protein transport
GO:0051301	P	cell division
GO:0072383	P	plus-end-directed vesicle transport along microtubule

9433

O_BomoASG18491_complete:A_BomoASG_c30242_g1_i1

155bp

Bomo_Chr5

hypothetical_protein_ABL78_8535_[Leptomonas_seymouri]

9434

O_BomoASG18492_5prime_partial:A_BomoASG_c30242_g1_i1

141bp

Bomo_Chr5

9435

O_BomoASG18493_complete:A_BomoASG_c30242_g1_i1

118bp

Bomo_Chr5

9436

O_BomoASG18494_complete:A_BomoASG_c30242_g1_i1

115bp

Bomo_Chr5

9437

O_BomoASG18495_complete:A_BomoASG_c30242_g1_i1

115bp

Bomo_Chr5

9438

O_BomoASG18496_internal:A_BomoASG_c30242_g1_i2

1343bp

Bomo_Chr5

LOW_QUALITY_PROTEIN:_kinesin-like_protein_KIF13A_[Bombyx_mori]

GO:0000139	C	Golgi membrane
GO:0000166	F	nucleotide binding
GO:0000910	P	cytokinesis
GO:0003777	F	microtubule motor activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0005768	C	endosome
GO:0005794	C	Golgi apparatus
GO:0005813	C	centrosome
GO:0005815	C	microtubule organizing center
GO:0005856	C	cytoskeleton
GO:0005871	C	kinesin complex
GO:0005874	C	microtubule
GO:0006810	P	transport
GO:0006886	P	intracellular protein transport
GO:0007018	P	microtubule-based movement
GO:0007049	P	cell cycle
GO:0008017	F	microtubule binding
GO:0008152	P	metabolic process
GO:0008333	P	endosome to lysosome transport
GO:0010008	C	endosome membrane
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016887	F	ATP hydrolysis activity
GO:0030496	C	midbody
GO:0032438	P	melanosome organization
GO:0032588	C	trans-Golgi network membrane
GO:0035459	P	vesicle cargo loading
GO:0043001	P	Golgi to plasma membrane protein transport
GO:0051301	P	cell division
GO:0072383	P	plus-end-directed vesicle transport along microtubule

9439

O_BomoASG18497_5prime_partial:A_BomoASG_c30242_g1_i2

141bp

Bomo_Chr5

9440

O_BomoASG18498_complete:A_BomoASG_c30242_g1_i2

118bp

Bomo_Chr5

9441

O_BomoASG18499_complete:A_BomoASG_c30242_g1_i2

115bp

Bomo_Chr5

9442

O_BomoASG1849_3prime_partial:A_BomoASG_c11938_g1_i1

100bp

Bomo_Chr24

WD_repeat-containing_protein_34_[Bombyx_mori]

9443

O_BomoASG184_complete:A_BomoASG_c1494_g1_i2

188bp

Bomo_Chr16

uncharacterized_protein_LOC101736053_[Bombyx_mori]

9444

O_BomoASG18500_complete:A_BomoASG_c30242_g1_i2

115bp

Bomo_Chr5

9445

O_BomoASG18501_3prime_partial:A_BomoASG_c30242_g1_i3

1723bp

Bomo_Chr5

LOW_QUALITY_PROTEIN:_kinesin-like_protein_KIF13A_[Bombyx_mori]

GO:0000139	C	Golgi membrane
GO:0000166	F	nucleotide binding
GO:0000910	P	cytokinesis
GO:0003777	F	microtubule motor activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0005768	C	endosome
GO:0005794	C	Golgi apparatus
GO:0005813	C	centrosome
GO:0005815	C	microtubule organizing center
GO:0005856	C	cytoskeleton
GO:0005871	C	kinesin complex
GO:0005874	C	microtubule
GO:0006810	P	transport
GO:0006886	P	intracellular protein transport
GO:0007018	P	microtubule-based movement
GO:0007049	P	cell cycle
GO:0008017	F	microtubule binding
GO:0008152	P	metabolic process
GO:0008333	P	endosome to lysosome transport
GO:0010008	C	endosome membrane
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016887	F	ATP hydrolysis activity
GO:0030496	C	midbody
GO:0032438	P	melanosome organization
GO:0032588	C	trans-Golgi network membrane
GO:0035459	P	vesicle cargo loading
GO:0043001	P	Golgi to plasma membrane protein transport
GO:0051301	P	cell division
GO:0072383	P	plus-end-directed vesicle transport along microtubule