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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9331 O_BomoASG1839_internal:A_BomoASG_c11902_g1_i1
163bp
 uncharacterized_protein_LOC101744306_isoform_X6_[Bombyx_mori]
GO:0000972 P transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0031081 P nuclear pore localization
GO:0031965 C nuclear membrane
GO:0043130 F ubiquitin binding
GO:0051028 P mRNA transport
GO:2000728 P regulation of mRNA export from nucleus in response to heat stress
9332 O_BomoASG183_internal:A_BomoASG_c1469_g1_i1
205bp
 muscle_M-line_assembly_protein_unc-89-like_[Bombyx_mori]
9333 O_BomoASG18400_complete:A_BomoASG_c30202_g1_i1
168bp
 adrenodoxin-like_protein,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0009055 F electron transfer activity
GO:0035073 P pupariation
GO:0045998 P positive regulation of ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
9334 O_BomoASG18401_3prime_partial:A_BomoASG_c30203_g1_i1
531bp
 uncharacterized_protein_LOC101738020_[Bombyx_mori]
9335 O_BomoASG18402_5prime_partial:A_BomoASG_c30204_g1_i1
494bp
 uncharacterized_protein_LOC101739889_[Bombyx_mori]
9336 O_BomoASG18403_complete:A_BomoASG_c30204_g1_i1
117bp
9337 O_BomoASG18404_5prime_partial:A_BomoASG_c30204_g1_i2
1572bp
 uncharacterized_protein_LOC101739889_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
9338 O_BomoASG18405_complete:A_BomoASG_c30204_g1_i2
133bp
9339 O_BomoASG18406_complete:A_BomoASG_c30204_g1_i2
117bp
9340 O_BomoASG18407_complete:A_BomoASG_c30204_g1_i3
1757bp
 uncharacterized_protein_LOC101739889_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005829 C cytosol
GO:0007165 P signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
9341 O_BomoASG18408_complete:A_BomoASG_c30204_g1_i3
139bp
9342 O_BomoASG18409_complete:A_BomoASG_c30204_g1_i3
133bp
9343 O_BomoASG1840_internal:A_BomoASG_c11905_g1_i1
201bp
 ribosome-releasing_factor_2,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0032543 P mitochondrial translation
GO:0032790 P ribosome disassembly
9344 O_BomoASG18410_5prime_partial:A_BomoASG_c30204_g1_i3
122bp
9345 O_BomoASG18411_complete:A_BomoASG_c30204_g1_i3
117bp
9346 O_BomoASG18412_3prime_partial:A_BomoASG_c30205_g1_i1
655bp
 25S_rRNA_(cytosine-C(5))-methyltransferase_nop2_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
9347 O_BomoASG18413_complete:A_BomoASG_c30206_g1_i1
930bp
 AP-2_complex_subunit_alpha_[Bombyx_mori]
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0048488 P synaptic vesicle endocytosis
9348 O_BomoASG18414_complete:A_BomoASG_c30206_g1_i1
139bp
9349 O_BomoASG18415_complete:A_BomoASG_c30206_g1_i1
103bp
9350 O_BomoASG18416_3prime_partial:A_BomoASG_c30206_g1_i2
300bp
 AP-2_complex_subunit_alpha_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0048488 P synaptic vesicle endocytosis
9351 O_BomoASG18417_complete:A_BomoASG_c30206_g1_i2
103bp
9352 O_BomoASG18418_5prime_partial:A_BomoASG_c30207_g1_i1
140bp
 cytochrome_P450,_partial_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006694 P steroid biosynthetic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019233 P sensory perception of pain
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
9353 O_BomoASG18419_complete:A_BomoASG_c30207_g1_i2
557bp
 cytochrome_P450_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006694 P steroid biosynthetic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019233 P sensory perception of pain
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
9354 O_BomoASG1841_internal:A_BomoASG_c11905_g1_i1
201bp
 hypothetical_protein_DA06_28385_[Georgenia_sp._SUBG003]
9355 O_BomoASG18420_complete:A_BomoASG_c30207_g1_i3
557bp
 cytochrome_P450_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006694 P steroid biosynthetic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019233 P sensory perception of pain
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
9356 O_BomoASG18421_complete:A_BomoASG_c30208_g1_i1
112bp
9357 O_BomoASG18422_complete:A_BomoASG_c30208_g1_i2
124bp
9358 O_BomoASG18423_complete:A_BomoASG_c30208_g1_i2
112bp
9359 O_BomoASG18424_complete:A_BomoASG_c30209_g1_i1
208bp
 coiled-coil_domain_containing_25_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
9360 O_BomoASG18425_3prime_partial:A_BomoASG_c30210_g1_i1
420bp
 Uncharacterized_protein_OBRU01_24464_[Operophtera_brumata]
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