Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
9121	O_BomoASG1820_internal:A_BomoASG_c11773_g1_i1 128bp	Bomo_Chr21	A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_7_[Bombyx_mori]	GO:0004222 F metalloendopeptidase activity GO:0005576 C extracellular region GO:0005578 C extracellular matrix GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0008270 F zinc ion binding GO:0009986 C cell surface GO:0016787 F hydrolase activity GO:0031012 C extracellular matrix GO:0032331 P negative regulation of chondrocyte differentiation GO:0046872 F metal ion binding GO:0051603 P proteolysis involved in cellular protein catabolic process GO:0071347 P cellular response to interleukin-1 GO:0071356 P cellular response to tumor necrosis factor GO:0071773 P cellular response to BMP stimulus GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
9122	O_BomoASG18210_complete:A_BomoASG_c30136_g1_i1 130bp	Bomo_Chr16
9123	O_BomoASG18211_3prime_partial:A_BomoASG_c30136_g2_i2 147bp	Bomo_Chr2	GD25103_[Drosophila_simulans]
9124	O_BomoASG18212_complete:A_BomoASG_c30136_g2_i2 141bp	Bomo_Chr2	ribosomal_protein_L23_[Bombyx_mori]	GO:0000022 P mitotic spindle elongation GO:0003735 F structural constituent of ribosome GO:0005840 C ribosome GO:0006412 P translation GO:0007052 P mitotic spindle organization GO:0017022 F myosin binding GO:0022008 P neurogenesis GO:0022625 C cytosolic large ribosomal subunit GO:0030529 C ribonucleoprotein complex GO:0070180 F large ribosomal subunit rRNA binding
9125	O_BomoASG18213_3prime_partial:A_BomoASG_c30138_g1_i2 128bp	Bomo_Chr14	PREDICTED:_uncharacterized_protein_LOC106718359_[Papilio_machaon]
9126	O_BomoASG18214_5prime_partial:A_BomoASG_c30138_g1_i2 101bp	Bomo_Chr14
9127	O_BomoASG18215_internal:A_BomoASG_c30138_g1_i6 308bp	Bomo_Chr10	parathyroid_hormone-responsive_B1_[Helicoverpa_armigera]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003693 F P-element binding GO:0004803 F transposase activity GO:0006310 P DNA recombination GO:0006313 P transposition, DNA-mediated GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0046872 F metal ion binding
9128	O_BomoASG18216_3prime_partial:A_BomoASG_c30138_g1_i7 235bp	Bomo_Chr24	parathyroid_hormone-responsive_B1_[Helicoverpa_armigera]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003693 F P-element binding GO:0004803 F transposase activity GO:0006310 P DNA recombination GO:0006313 P transposition, DNA-mediated GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0046872 F metal ion binding
9129	O_BomoASG18217_3prime_partial:A_BomoASG_c30138_g1_i8 128bp	Bomo_Chr10	PREDICTED:_uncharacterized_protein_LOC106718359_[Papilio_machaon]
9130	O_BomoASG18218_5prime_partial:A_BomoASG_c30138_g1_i8 101bp	Bomo_Chr10
9131	O_BomoASG18219_5prime_partial:A_BomoASG_c30139_g1_i1 263bp	Bomo_Chr21	uncharacterized_protein_LOC101746471_[Bombyx_mori]
9132	O_BomoASG1821_complete:A_BomoASG_c11776_g1_i1 103bp	Bomo_Chr3	LSM_Sm-like_protein_family_member_[Bombyx_mori]	GO:0000398 P mRNA splicing, via spliceosome GO:0000932 C P-body GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0005688 C U6 snRNP GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0030529 C ribonucleoprotein complex GO:0030629 F U6 snRNA 3'-end binding GO:0033962 P P-body assembly GO:0044822 F RNA binding GO:0046540 C U4/U6 x U5 tri-snRNP complex GO:0071011 C precatalytic spliceosome GO:0071013 C catalytic step 2 spliceosome GO:1990726 C Lsm1-7-Pat1 complex
9133	O_BomoASG18220_5prime_partial:A_BomoASG_c30140_g1_i1 353bp	Bomo_Chr21	OTU_domain-containing_protein_7B_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0002376 P immune system process GO:0002385 P mucosal immune response GO:0003677 F DNA binding GO:0004843 F thiol-dependent deubiquitinase GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0008234 F cysteine-type peptidase activity GO:0008270 F zinc ion binding GO:0016579 P protein deubiquitination GO:0016787 F hydrolase activity GO:0032717 P negative regulation of interleukin-8 production GO:0035871 P protein K11-linked deubiquitination GO:0036459 F thiol-dependent deubiquitinase GO:0043124 P negative regulation of I-kappaB kinase/NF-kappaB signaling GO:0046872 F metal ion binding GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding GO:0070536 P protein K63-linked deubiquitination GO:0071108 P protein K48-linked deubiquitination GO:0071947 P protein deubiquitination involved in ubiquitin-dependent protein catabolic process GO:1900181 P negative regulation of protein localization to nucleus GO:1990380 F Lys48-specific deubiquitinase activity
9134	O_BomoASG18221_3prime_partial:A_BomoASG_c30140_g1_i1 127bp	Bomo_Chr21
9135	O_BomoASG18222_complete:A_BomoASG_c30141_g1_i1 118bp	Bomo_Chr24	adenylate_cyclase_[Bombyx_mori]
9136	O_BomoASG18223_complete:A_BomoASG_c30141_g1_i4 175bp	Bomo_Chr24	adenylate_cyclase_[Bombyx_mori]
9137	O_BomoASG18224_complete:A_BomoASG_c30141_g2_i1 810bp	Bomo_Chr25	N-terminal_kinase-like_protein_[Bombyx_mori]	GO:0004672 F protein kinase activity GO:0005524 F ATP binding GO:0006468 P protein phosphorylation
9138	O_BomoASG18225_complete:A_BomoASG_c30141_g2_i2 197bp	Bomo_Chr25	N-terminal_kinase-like_protein_[Bombyx_mori]
9139	O_BomoASG18226_complete:A_BomoASG_c30141_g2_i3 612bp	Bomo_Chr24	N-terminal_kinase-like_protein_[Bombyx_mori]	GO:0004672 F protein kinase activity GO:0005524 F ATP binding GO:0006468 P protein phosphorylation
9140	O_BomoASG18227_5prime_partial:A_BomoASG_c30141_g2_i3 109bp	Bomo_Chr24
9141	O_BomoASG18228_complete:A_BomoASG_c30142_g1_i1 210bp	Bomo_Chr9	max-like_protein_X_isoform_X1_[Bombyx_mori]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0001227 F DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008134 F transcription factor binding GO:0042803 F protein homodimerization activity GO:0045892 P negative regulation of transcription, DNA-templated GO:0046982 F protein heterodimerization activity GO:0046983 F protein dimerization activity
9142	O_BomoASG18229_internal:A_BomoASG_c30144_g3_i1 150bp		hypothetical_protein_[Mycobacterium_sp._1100029.7]	GO:0000166 F nucleotide binding GO:0000932 C P-body GO:0003697 F single-stranded DNA binding GO:0003727 F single-stranded RNA binding GO:0005515 F protein binding GO:0005634 C nucleus GO:0005730 C nucleolus GO:0005737 C cytoplasm GO:0005764 C lysosome GO:0005783 C endoplasmic reticulum GO:0010494 C cytoplasmic stress granule GO:0030529 C ribonucleoprotein complex GO:0032197 P transposition, RNA-mediated GO:0042802 F identical protein binding
9143	O_BomoASG1822_internal:A_BomoASG_c11779_g1_i1 118bp	Bomo_Chr5	leucine-rich_repeat-containing_protein_70_[Bombyx_mori]	GO:0005515 F protein binding GO:0005886 C plasma membrane GO:0007275 P multicellular organism development GO:0007399 P nervous system development GO:0009986 C cell surface GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0045773 P positive regulation of axon extension
9144	O_BomoASG18230_5prime_partial:A_BomoASG_c30145_g1_i1 438bp	Bomo_Chr1	pyruvate_dehydrogenase_[acetyl-transferring]-phosphatase_1,_mitochondrial_isoform_X1_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004721 F phosphoprotein phosphatase activity GO:0004722 F protein serine/threonine phosphatase activity GO:0004741 F [pyruvate dehydrogenase (lipoamide)] phosphatase activity GO:0005509 F calcium ion binding GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0006470 P protein dephosphorylation GO:0016787 F hydrolase activity GO:0035970 P peptidyl-threonine dephosphorylation GO:0043169 F cation binding GO:0046872 F metal ion binding
9145	O_BomoASG18231_complete:A_BomoASG_c30145_g1_i2 508bp	Bomo_Chr1	pyruvate_dehydrogenase_[acetyl-transferring]-phosphatase_1,_mitochondrial_isoform_X1_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0004721 F phosphoprotein phosphatase activity GO:0004722 F protein serine/threonine phosphatase activity GO:0004741 F [pyruvate dehydrogenase (lipoamide)] phosphatase activity GO:0005509 F calcium ion binding GO:0005739 C mitochondrion GO:0005759 C mitochondrial matrix GO:0006470 P protein dephosphorylation GO:0016787 F hydrolase activity GO:0035970 P peptidyl-threonine dephosphorylation GO:0043169 F cation binding GO:0046872 F metal ion binding
9146	O_BomoASG18232_5prime_partial:A_BomoASG_c30146_g1_i2 101bp	Bomo_Chr8	dullard-like_protein_[Bombyx_mori]	GO:0004721 F phosphoprotein phosphatase activity GO:0004722 F protein serine/threonine phosphatase activity GO:0005635 C nuclear envelope GO:0005737 C cytoplasm GO:0005789 C endoplasmic reticulum membrane GO:0006470 P protein dephosphorylation GO:0006998 P nuclear envelope organization GO:0007474 P imaginal disc-derived wing vein specification GO:0010867 P positive regulation of triglyceride biosynthetic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity GO:0030514 P negative regulation of BMP signaling pathway GO:0031965 C nuclear membrane GO:0071595 C Nem1-Spo7 phosphatase complex
9147	O_BomoASG18233_complete:A_BomoASG_c30146_g1_i3 245bp	Bomo_Chr8	dullard-like_protein_[Bombyx_mori]	GO:0004721 F phosphoprotein phosphatase activity GO:0004722 F protein serine/threonine phosphatase activity GO:0005635 C nuclear envelope GO:0005737 C cytoplasm GO:0005789 C endoplasmic reticulum membrane GO:0006470 P protein dephosphorylation GO:0006998 P nuclear envelope organization GO:0007474 P imaginal disc-derived wing vein specification GO:0010867 P positive regulation of triglyceride biosynthetic process GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016787 F hydrolase activity GO:0016791 F phosphatase activity GO:0030514 P negative regulation of BMP signaling pathway GO:0031965 C nuclear membrane GO:0071595 C Nem1-Spo7 phosphatase complex
9148	O_BomoASG18234_complete:A_BomoASG_c30147_g1_i1 482bp	Bomo_Chr5	sorting_nexin-17_isoform_X1_[Bombyx_mori]	GO:0005737 C cytoplasm GO:0005768 C endosome GO:0005769 C early endosome GO:0005829 C cytosol GO:0006810 P transport GO:0006886 P intracellular protein transport GO:0007165 P signal transduction GO:0008289 F lipid binding GO:0015031 P protein transport GO:0016020 C membrane GO:0016023 C cytoplasmic vesicle GO:0030659 C cytoplasmic vesicle membrane GO:0031410 C cytoplasmic vesicle GO:0035091 F phosphatidylinositol binding GO:1990126 P endocytic recycling
9149	O_BomoASG18235_complete:A_BomoASG_c30148_g1_i1 392bp	Bomo_Chr19	glutamyl-tRNA_amidotransferase_subunit_B_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0005524 F ATP binding GO:0005739 C mitochondrion GO:0006412 P translation GO:0016874 F ligase activity GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
9150	O_BomoASG18236_complete:A_BomoASG_c30148_g1_i1 136bp	Bomo_Chr19	hypothetical_protein_AUI10_04175_[Actinobacteria_bacterium_13_2_20CM_2_72_6]