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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8941 O_BomoASG18048_5prime_partial:A_BomoASG_c30073_g1_i1
367bp
8942 O_BomoASG18049_complete:A_BomoASG_c30073_g1_i1
130bp
8943 O_BomoASG1804_internal:A_BomoASG_c11634_g1_i1
218bp
 uncharacterized_protein_LOC105842437_[Bombyx_mori]
8944 O_BomoASG18050_5prime_partial:A_BomoASG_c30074_g1_i1
165bp
 regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_isoform_X2_[Bombyx_mori]
GO:0000993 F RNA polymerase II complex binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0010564 P regulation of cell cycle process
GO:0016591 C RNA polymerase II, holoenzyme
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
8945 O_BomoASG18051_complete:A_BomoASG_c30074_g1_i3
349bp
 regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_isoform_X1_[Bombyx_mori]
GO:0000993 F RNA polymerase II complex binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0010564 P regulation of cell cycle process
GO:0016591 C RNA polymerase II, holoenzyme
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
8946 O_BomoASG18052_5prime_partial:A_BomoASG_c30074_g1_i4
242bp
 regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_isoform_X1_[Bombyx_mori]
GO:0000993 F RNA polymerase II complex binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0010564 P regulation of cell cycle process
GO:0016591 C RNA polymerase II, holoenzyme
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
8947 O_BomoASG18053_internal:A_BomoASG_c30075_g1_i1
787bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
GO:0000785 C chromatin
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018991 P oviposition
GO:0032259 P methylation
GO:0034770 P histone H4-K20 methylation
GO:0035035 F histone acetyltransferase binding
GO:0042054 F histone methyltransferase activity
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0051567 P histone H3-K9 methylation
GO:0051568 P histone H3-K4 methylation
8948 O_BomoASG18054_5prime_partial:A_BomoASG_c30075_g1_i1
139bp
8949 O_BomoASG18055_internal:A_BomoASG_c30075_g1_i2
503bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
GO:0000785 C chromatin
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018991 P oviposition
GO:0032259 P methylation
GO:0034770 P histone H4-K20 methylation
GO:0035035 F histone acetyltransferase binding
GO:0042054 F histone methyltransferase activity
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0051567 P histone H3-K9 methylation
GO:0051568 P histone H3-K4 methylation
8950 O_BomoASG18056_5prime_partial:A_BomoASG_c30075_g1_i2
139bp
8951 O_BomoASG18057_internal:A_BomoASG_c30077_g1_i1
263bp
 enhancer_of_mRNA-decapping_protein_4_homolog,_partial_[Bombyx_mori]
GO:0000932 C P-body
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0033962 P P-body assembly
GO:0035195 P gene silencing by miRNA
GO:0045451 P pole plasm oskar mRNA localization
GO:0050832 P defense response to fungus
8952 O_BomoASG18058_complete:A_BomoASG_c30078_g1_i1
1536bp
 uncharacterized_protein_LOC101744111_[Bombyx_mori]
8953 O_BomoASG18059_complete:A_BomoASG_c30078_g1_i1
178bp
8954 O_BomoASG1805_complete:A_BomoASG_c11642_g1_i1
372bp
 dynactin_subunit_2_[Bombyx_mori]
GO:0003774 F cytoskeletal motor activity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007067 P mitotic cell cycle
GO:0008152 P metabolic process
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0030286 C dynein complex
GO:0031982 C vesicle
8955 O_BomoASG18060_complete:A_BomoASG_c30078_g1_i1
145bp
8956 O_BomoASG18061_complete:A_BomoASG_c30078_g1_i1
142bp
8957 O_BomoASG18062_complete:A_BomoASG_c30078_g1_i1
114bp
8958 O_BomoASG18063_complete:A_BomoASG_c30079_g2_i1
699bp
 uncharacterized_protein_LOC101743076_[Bombyx_mori]
8959 O_BomoASG18064_complete:A_BomoASG_c30079_g2_i1
165bp
 hypothetical_protein_WN48_07866_[Eufriesea_mexicana]
8960 O_BomoASG18065_complete:A_BomoASG_c30079_g2_i1
115bp
8961 O_BomoASG18066_complete:A_BomoASG_c30079_g2_i1
101bp
8962 O_BomoASG18067_complete:A_BomoASG_c30079_g2_i3
699bp
 uncharacterized_protein_LOC101743076_[Bombyx_mori]
8963 O_BomoASG18068_complete:A_BomoASG_c30079_g2_i3
165bp
 hypothetical_protein_WN48_07866_[Eufriesea_mexicana]
8964 O_BomoASG18069_complete:A_BomoASG_c30079_g2_i3
115bp
8965 O_BomoASG1806_internal:A_BomoASG_c11644_g1_i1
142bp
 DNA_cytosine-5_methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
8966 O_BomoASG18070_complete:A_BomoASG_c30079_g2_i3
101bp
8967 O_BomoASG18071_complete:A_BomoASG_c30079_g2_i4
699bp
 uncharacterized_protein_LOC101743076_[Bombyx_mori]
8968 O_BomoASG18072_complete:A_BomoASG_c30079_g2_i4
165bp
 hypothetical_protein_WN48_07866_[Eufriesea_mexicana]
8969 O_BomoASG18073_complete:A_BomoASG_c30079_g2_i4
115bp
8970 O_BomoASG18074_complete:A_BomoASG_c30079_g2_i4
101bp
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