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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8881 O_BomoASG17995_internal:A_BomoASG_c30043_g2_i1
177bp
8882 O_BomoASG17996_internal:A_BomoASG_c30043_g2_i1
177bp
 PREDICTED:_WD_repeat-containing_protein_44-like_isoform_X1_[Papilio_polytes]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0048471 C perinuclear region of cytoplasm
8883 O_BomoASG17997_3prime_partial:A_BomoASG_c30044_g1_i1
101bp
8884 O_BomoASG17998_complete:A_BomoASG_c30044_g1_i2
122bp
8885 O_BomoASG17999_complete:A_BomoASG_c30044_g1_i3
122bp
8886 O_BomoASG1799_internal:A_BomoASG_c11606_g1_i1
248bp
 hypothetical_protein_RR48_09229_[Papilio_machaon]
8887 O_BomoASG179_internal:A_BomoASG_c1410_g1_i1
104bp
 integrin_beta-nu_precursor_[Bombyx_mori]
GO:0005515 F protein binding
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008305 C integrin complex
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031430 C M band
GO:0032956 P regulation of actin cytoskeleton organization
GO:0040017 P positive regulation of locomotion
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0045987 P positive regulation of smooth muscle contraction
GO:0055001 P muscle cell development
GO:0055120 C striated muscle dense body
GO:0060279 P positive regulation of ovulation
GO:1903356 P positive regulation of distal tip cell migration
GO:1904901 P positive regulation of myosin II filament organization
8888 O_BomoASG17_internal:A_BomoASG_c131_g1_i1
224bp
 uncharacterized_protein_LOC101745877_isoform_X2_[Bombyx_mori]
8889 O_BomoASG18000_5prime_partial:A_BomoASG_c30045_g1_i1
375bp
 LOW_QUALITY_PROTEIN:_calcium-transporting_ATPase_type_2C_member_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0004871 F obsolete signal transducer activity
GO:0005388 F P-type calcium transporter activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006828 P manganese ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0007165 P signal transduction
GO:0008152 P metabolic process
GO:0008544 P epidermis development
GO:0015410 F ABC-type manganese transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016787 F hydrolase activity
GO:0030026 P cellular manganese ion homeostasis
GO:0030145 F manganese ion binding
GO:0031532 P actin cytoskeleton reorganization
GO:0032468 P Golgi calcium ion homeostasis
GO:0032472 P Golgi calcium ion transport
GO:0034220 P ion transmembrane transport
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:0071421 P manganese ion transmembrane transport
8890 O_BomoASG18001_complete:A_BomoASG_c30045_g1_i1
147bp
 hypothetical_protein_AYI68_g7248_[Smittium_mucronatum]
8891 O_BomoASG18002_5prime_partial:A_BomoASG_c30046_g1_i1
192bp
 protein_daughterless_isoform_X3_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001012 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007530 P sex determination
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008134 F transcription factor binding
GO:0008407 P chaeta morphogenesis
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0035019 P somatic stem cell population maintenance
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045464 P R8 cell fate specification
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048477 P oogenesis
GO:0048663 P neuron fate commitment
GO:0061101 P neuroendocrine cell differentiation
GO:0061382 P Malpighian tubule tip cell differentiation
8892 O_BomoASG18003_3prime_partial:A_BomoASG_c30046_g1_i1
140bp
8893 O_BomoASG18004_5prime_partial:A_BomoASG_c30046_g1_i1
101bp
8894 O_BomoASG18005_5prime_partial:A_BomoASG_c30046_g1_i2
420bp
 protein_daughterless_isoform_X2_[Helicoverpa_armigera]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001012 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007530 P sex determination
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008134 F transcription factor binding
GO:0008407 P chaeta morphogenesis
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0035019 P somatic stem cell population maintenance
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045464 P R8 cell fate specification
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048477 P oogenesis
GO:0048663 P neuron fate commitment
GO:0061101 P neuroendocrine cell differentiation
GO:0061382 P Malpighian tubule tip cell differentiation
8895 O_BomoASG18006_complete:A_BomoASG_c30046_g1_i2
226bp
8896 O_BomoASG18007_5prime_partial:A_BomoASG_c30047_g1_i1
310bp
 PREDICTED:_uncharacterized_protein_LOC105389752_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0006313 P transposition, DNA-mediated
GO:0008270 F zinc ion binding
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0046872 F metal ion binding
8897 O_BomoASG18008_complete:A_BomoASG_c30048_g1_i1
367bp
 protein_ALP1-like_[Bombyx_mori]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8898 O_BomoASG18009_complete:A_BomoASG_c30049_g1_i1
299bp
 protein_MAK16_homolog_A_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
8899 O_BomoASG1800_3prime_partial:A_BomoASG_c11624_g1_i1
144bp
8900 O_BomoASG18010_5prime_partial:A_BomoASG_c30049_g1_i1
128bp
8901 O_BomoASG18011_internal:A_BomoASG_c30051_g1_i1
256bp
8902 O_BomoASG18012_internal:A_BomoASG_c30051_g1_i1
255bp
 zinc_finger_protein_OZF_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8903 O_BomoASG18013_internal:A_BomoASG_c30051_g1_i1
255bp
8904 O_BomoASG18014_complete:A_BomoASG_c30051_g2_i1
339bp
 Krueppel-like_factor_10_[Bombyx_mori]
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007623 P circadian rhythm
GO:0009267 P cellular response to starvation
GO:0030282 P bone mineralization
GO:0035019 P somatic stem cell population maintenance
GO:0042752 P regulation of circadian rhythm
GO:0045672 P positive regulation of osteoclast differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:1901653 P cellular response to peptide
8905 O_BomoASG18015_internal:A_BomoASG_c30051_g3_i2
124bp
8906 O_BomoASG18016_5prime_partial:A_BomoASG_c30051_g3_i2
120bp
 zinc_finger_protein_2_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0042476 P odontogenesis
GO:0046872 F metal ion binding
8907 O_BomoASG18017_5prime_partial:A_BomoASG_c30053_g1_i1
301bp
 DNA_excision_repair_protein_ERCC-1_isoform_X1_[Bombyx_mori]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000109 C nucleotide-excision repair complex
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000720 P pyrimidine dimer repair by nucleotide-excision repair
GO:0000784 C chromosome, telomeric region
GO:0001094 F TFIID-class transcription factor complex binding
GO:0001302 P obsolete replicative cell aging
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006293 P nucleotide-excision repair, preincision complex stabilization
GO:0006295 P nucleotide-excision repair, DNA incision, 3'-to lesion
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006949 P syncytium formation
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007584 P response to nutrient
GO:0008022 F protein C-terminus binding
GO:0008283 P cell population proliferation
GO:0008584 P male gonad development
GO:0009650 P UV protection
GO:0009744 P response to sucrose
GO:0010165 P response to X-ray
GO:0010259 P multicellular organism aging
GO:0016787 F hydrolase activity
GO:0019904 F protein domain specific binding
GO:0032205 P negative regulation of telomere maintenance
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0035166 P post-embryonic hemopoiesis
GO:0035264 P multicellular organism growth
GO:0036297 P interstrand cross-link repair
GO:0043566 F DNA binding
GO:0045190 P isotype switching
GO:0048468 P cell development
GO:0048477 P oogenesis
GO:0048568 P embryonic organ development
GO:0051276 P chromosome organization
GO:0070522 C ERCC4-ERCC1 complex
GO:0070911 P global genome nucleotide-excision repair
GO:0090656 P t-circle formation
GO:1904431 P positive regulation of t-circle formation
8908 O_BomoASG18018_3prime_partial:A_BomoASG_c30055_g1_i2
375bp
 transmembrane_channel-like_protein_6_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
8909 O_BomoASG18019_complete:A_BomoASG_c30055_g1_i2
127bp
8910 O_BomoASG1801_3prime_partial:A_BomoASG_c11624_g1_i1
137bp
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