Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
8731	O_BomoASG1785_5prime_partial:A_BomoASG_c11509_g1_i1 109bp	Bomo_Chr25
8732	O_BomoASG17860_3prime_partial:A_BomoASG_c29993_g1_i2 1050bp	Bomo_Chr18	apoptosis-stimulating_of_p53_protein_1_[Bombyx_mori]	GO:0002039 F p53 binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0006915 P apoptotic process GO:0008134 F transcription factor binding GO:0045786 P negative regulation of cell cycle GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator GO:0097193 P intrinsic apoptotic signaling pathway
8733	O_BomoASG17861_3prime_partial:A_BomoASG_c29993_g1_i2 196bp	Bomo_Chr18
8734	O_BomoASG17862_complete:A_BomoASG_c29993_g1_i2 123bp	Bomo_Chr18
8735	O_BomoASG17863_5prime_partial:A_BomoASG_c29993_g1_i2 101bp	Bomo_Chr18
8736	O_BomoASG17864_internal:A_BomoASG_c29993_g1_i3 937bp	Bomo_Chr18	apoptosis-stimulating_of_p53_protein_1_[Bombyx_mori]	GO:0002039 F p53 binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0006915 P apoptotic process GO:0008134 F transcription factor binding GO:0045786 P negative regulation of cell cycle GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator GO:0097193 P intrinsic apoptotic signaling pathway
8737	O_BomoASG17865_complete:A_BomoASG_c29993_g1_i3 123bp	Bomo_Chr18
8738	O_BomoASG17866_5prime_partial:A_BomoASG_c29993_g1_i3 101bp	Bomo_Chr18
8739	O_BomoASG17867_complete:A_BomoASG_c29997_g1_i1 238bp	Bomo_Chr1	PQ-loop_repeat-containing_protein_3_[Bombyx_mori]	GO:0003674 F molecular_function GO:0006488 P dolichol-linked oligosaccharide biosynthetic process GO:0016020 C membrane GO:0016021 C integral component of membrane
8740	O_BomoASG17868_3prime_partial:A_BomoASG_c29998_g1_i1 321bp	Bomo_Chr27	transcription_factor_EB_[Bombyx_mori]	GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001892 P embryonic placenta development GO:0002250 P adaptive immune response GO:0002376 P immune system process GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0006914 P autophagy GO:0006959 P humoral immune response GO:0007040 P lysosome organization GO:0010508 P positive regulation of autophagy GO:0044212 F transcription cis-regulatory region binding GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046982 F protein heterodimerization activity GO:0046983 F protein dimerization activity
8741	O_BomoASG17869_5prime_partial:A_BomoASG_c29998_g1_i1 136bp	Bomo_Chr27
8742	O_BomoASG1786_complete:A_BomoASG_c11519_g1_i1 239bp	Bomo_Chr18	upstream_stimulatory_factor_1_isoform_X2_[Bombyx_mori]	GO:0000432 P positive regulation of transcription from RNA polymerase II promoter by glucose GO:0001666 P response to hypoxia GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005667 C transcription regulator complex GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0009411 P response to UV GO:0019086 P late viral transcription GO:0019899 F enzyme binding GO:0019901 F protein kinase binding GO:0032869 P cellular response to insulin stimulus GO:0042803 F protein homodimerization activity GO:0042826 F histone deacetylase binding GO:0043425 F bHLH transcription factor binding GO:0043565 F sequence-specific DNA binding GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046982 F protein heterodimerization activity GO:0046983 F protein dimerization activity GO:0055088 P lipid homeostasis
8743	O_BomoASG17870_complete:A_BomoASG_c29998_g1_i1 101bp	Bomo_Chr27
8744	O_BomoASG17871_internal:A_BomoASG_c30000_g1_i1 273bp	Bomo_Chr5	LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737452_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0007165 P signal transduction GO:0007275 P multicellular organism development GO:0043565 F sequence-specific DNA binding GO:0044212 F transcription cis-regulatory region binding GO:0046872 F metal ion binding
8745	O_BomoASG17872_3prime_partial:A_BomoASG_c30000_g1_i2 346bp	Bomo_Chr5	LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737452_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0007165 P signal transduction GO:0007275 P multicellular organism development GO:0043565 F sequence-specific DNA binding GO:0044212 F transcription cis-regulatory region binding GO:0046872 F metal ion binding
8746	O_BomoASG17873_3prime_partial:A_BomoASG_c30000_g1_i3 355bp	Bomo_Chr5	LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737452_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006366 P transcription by RNA polymerase II GO:0007165 P signal transduction GO:0007275 P multicellular organism development GO:0043565 F sequence-specific DNA binding GO:0044212 F transcription cis-regulatory region binding GO:0046872 F metal ion binding
8747	O_BomoASG17874_internal:A_BomoASG_c30003_g1_i1 340bp	Bomo_Chr12	PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]	GO:0003676 F nucleic acid binding GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8748	O_BomoASG17875_internal:A_BomoASG_c30004_g1_i2 130bp	Bomo_Chr3	ubiA_prenyltransferase_domain-containing_protein_1_homolog_[Bombyx_mori]	GO:0003674 F molecular_function GO:0004659 F prenyltransferase activity GO:0005739 C mitochondrion GO:0005783 C endoplasmic reticulum GO:0008592 P regulation of Toll signaling pathway GO:0009234 P menaquinone biosynthetic process GO:0012505 C endomembrane system GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity GO:0031966 C mitochondrial membrane GO:0035167 P larval lymph gland hemopoiesis GO:0035204 P negative regulation of lamellocyte differentiation GO:0035207 P negative regulation of hemocyte proliferation GO:0043408 P regulation of MAPK cascade GO:0045610 P regulation of hemocyte differentiation GO:0046425 P regulation of receptor signaling pathway via JAK-STAT GO:0046578 P regulation of Ras protein signal transduction GO:0070584 P mitochondrion morphogenesis
8749	O_BomoASG17876_3prime_partial:A_BomoASG_c30004_g1_i3 244bp	Bomo_Chr3	ubiA_prenyltransferase_domain-containing_protein_1_homolog_[Bombyx_mori]	GO:0003674 F molecular_function GO:0004659 F prenyltransferase activity GO:0005739 C mitochondrion GO:0005783 C endoplasmic reticulum GO:0008592 P regulation of Toll signaling pathway GO:0009234 P menaquinone biosynthetic process GO:0012505 C endomembrane system GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016740 F transferase activity GO:0031966 C mitochondrial membrane GO:0035167 P larval lymph gland hemopoiesis GO:0035204 P negative regulation of lamellocyte differentiation GO:0035207 P negative regulation of hemocyte proliferation GO:0043408 P regulation of MAPK cascade GO:0045610 P regulation of hemocyte differentiation GO:0046425 P regulation of receptor signaling pathway via JAK-STAT GO:0046578 P regulation of Ras protein signal transduction GO:0070584 P mitochondrion morphogenesis
8750	O_BomoASG17877_complete:A_BomoASG_c30005_g1_i2 347bp	Bomo_Chr20	GMP_reductase_1_isoform_X1_[Bombyx_mori]	GO:0003824 F catalytic activity GO:0003920 F GMP reductase activity GO:0005829 C cytosol GO:0006144 P purine nucleobase metabolic process GO:0006163 P purine nucleotide metabolic process GO:0009117 P nucleotide metabolic process GO:0009409 P response to cold GO:0016491 F oxidoreductase activity GO:0043101 P purine-containing compound salvage GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process GO:1902560 C GMP reductase complex
8751	O_BomoASG17878_complete:A_BomoASG_c30005_g1_i2 109bp	Bomo_Chr20	hypothetical_protein_SKA53_03249_[Loktanella_vestfoldensis_SKA53]
8752	O_BomoASG17879_3prime_partial:A_BomoASG_c30006_g1_i1 244bp	Bomo_Chr17	phosphatidylinositol_N-acetylglucosaminyltransferase_subunit_Q_[Bombyx_mori]
8753	O_BomoASG1787_complete:A_BomoASG_c11519_g1_i2 244bp	Bomo_Chr18	upstream_stimulatory_factor_1_isoform_X1_[Bombyx_mori]	GO:0000430 P regulation of transcription from RNA polymerase II promoter by glucose GO:0000432 P positive regulation of transcription from RNA polymerase II promoter by glucose GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0007595 P lactation GO:0019086 P late viral transcription GO:0042803 F protein homodimerization activity GO:0043231 C intracellular membrane-bounded organelle GO:0043425 F bHLH transcription factor binding GO:0043565 F sequence-specific DNA binding GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046982 F protein heterodimerization activity GO:0046983 F protein dimerization activity GO:0055088 P lipid homeostasis
8754	O_BomoASG17880_complete:A_BomoASG_c30007_g1_i2 271bp	Bomo_Chr14	glucosamine-6-phosphate_isomerase_2_isoform_X2_[Bombyx_mori]	GO:0004342 F glucosamine-6-phosphate deaminase activity GO:0005737 C cytoplasm GO:0005975 P carbohydrate metabolic process GO:0006044 P N-acetylglucosamine metabolic process GO:0016787 F hydrolase activity
8755	O_BomoASG17881_complete:A_BomoASG_c30007_g1_i2 119bp	Bomo_Chr14	Uncharacterised_protein_[Shigella_sonnei]
8756	O_BomoASG17882_complete:A_BomoASG_c30007_g1_i2 103bp	Bomo_Chr14
8757	O_BomoASG17883_5prime_partial:A_BomoASG_c30007_g1_i3 156bp	Bomo_Chr14	glucosamine-6-phosphate_isomerase_isoform_X1_[Bombyx_mori]	GO:0004342 F glucosamine-6-phosphate deaminase activity GO:0005737 C cytoplasm GO:0005975 P carbohydrate metabolic process GO:0006043 P glucosamine catabolic process GO:0006044 P N-acetylglucosamine metabolic process GO:0006091 P generation of precursor metabolites and energy GO:0016787 F hydrolase activity
8758	O_BomoASG17884_complete:A_BomoASG_c30007_g1_i3 104bp	Bomo_Chr14	conserved_hypothetical_protein_[Klebsiella_variicola]
8759	O_BomoASG17885_complete:A_BomoASG_c30007_g1_i4 279bp	Bomo_Chr14	glucosamine-6-phosphate_isomerase_isoform_X1_[Bombyx_mori]	GO:0004342 F glucosamine-6-phosphate deaminase activity GO:0005737 C cytoplasm GO:0005975 P carbohydrate metabolic process GO:0006044 P N-acetylglucosamine metabolic process GO:0016787 F hydrolase activity
8760	O_BomoASG17886_complete:A_BomoASG_c30007_g1_i4 119bp	Bomo_Chr14	Uncharacterised_protein_[Shigella_sonnei]