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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
871 O_BomoASG10785_3prime_partial:A_BomoASG_c26564_g1_i1
112bp
 craniofacial_development_protein_2-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
872 O_BomoASG10786_complete:A_BomoASG_c26564_g1_i3
123bp
 hypothetical_protein_RR48_06604_[Papilio_machaon]
873 O_BomoASG10787_3prime_partial:A_BomoASG_c26564_g1_i3
112bp
 craniofacial_development_protein_2-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
874 O_BomoASG10788_complete:A_BomoASG_c26566_g1_i1
193bp
 PCNA-associated_factor_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0019985 P translesion synthesis
GO:0048471 C perinuclear region of cytoplasm
GO:0051297 P centrosome cycle
GO:0051726 P regulation of cell cycle
875 O_BomoASG10789_5prime_partial:A_BomoASG_c26566_g1_i2
198bp
 PCNA-associated_factor_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0019985 P translesion synthesis
GO:0048471 C perinuclear region of cytoplasm
GO:0051297 P centrosome cycle
GO:0051726 P regulation of cell cycle
876 O_BomoASG1078_complete:A_BomoASG_c6524_g1_i1
646bp
 sodium-independent_sulfate_anion_transporter_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
877 O_BomoASG10790_internal:A_BomoASG_c26568_g1_i1
235bp
 PREDICTED:_protein_FAM214A_isoform_X1_[Amyelois_transitella]
878 O_BomoASG10791_3prime_partial:A_BomoASG_c26569_g1_i1
257bp
 LIM_domain_kinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001736 P establishment of planar polarity
GO:0001737 P establishment of imaginal disc-derived wing hair orientation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007416 P synapse assembly
GO:0007560 P imaginal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030036 P actin cytoskeleton organization
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0048812 P neuron projection morphogenesis
GO:0050770 P regulation of axonogenesis
GO:0051124 P synaptic assembly at neuromuscular junction
879 O_BomoASG10792_complete:A_BomoASG_c26569_g1_i1
112bp
880 O_BomoASG10793_3prime_partial:A_BomoASG_c26572_g2_i1
297bp
 uncharacterized_protein_LOC101741614_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003149 P membranous septum morphogenesis
GO:0003289 P atrial septum primum morphogenesis
GO:0003290 P atrial septum secundum morphogenesis
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0009653 P anatomical structure morphogenesis
GO:0010452 P histone H3-K36 methylation
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034770 P histone H4-K20 methylation
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0048298 P positive regulation of isotype switching to IgA isotypes
GO:0060348 P bone development
GO:0070201 P regulation of establishment of protein localization
GO:2001032 P regulation of double-strand break repair via nonhomologous end joining
881 O_BomoASG10794_complete:A_BomoASG_c26573_g1_i1
320bp
 interferon_regulatory_factor_2-binding_protein-like_A_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
882 O_BomoASG10795_3prime_partial:A_BomoASG_c26573_g1_i1
123bp
 uncharacterized_protein_LOC101740927_[Bombyx_mori]
883 O_BomoASG10796_complete:A_BomoASG_c26573_g1_i2
424bp
 interferon_regulatory_factor_2-binding_protein-like_A_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0046872 F metal ion binding
884 O_BomoASG10797_complete:A_BomoASG_c26573_g1_i2
238bp
 hypothetical_protein_RR48_08791_[Papilio_machaon]
885 O_BomoASG10798_complete:A_BomoASG_c26573_g1_i2
101bp
886 O_BomoASG10799_complete:A_BomoASG_c26574_g1_i1
581bp
 band_4.1-like_protein_5_[Bombyx_mori]
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0001837 P epithelial to mesenchymal transition
GO:0001839 P neural plate morphogenesis
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0003382 P epithelial cell morphogenesis
GO:0003383 P apical constriction
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005925 C focal adhesion
GO:0006931 P substrate-dependent cell migration, cell attachment to substrate
GO:0007398 P ectoderm development
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0007509 P mesoderm migration involved in gastrulation
GO:0008092 F cytoskeletal protein binding
GO:0009826 P unidimensional cell growth
GO:0010608 P posttranscriptional regulation of gene expression
GO:0010634 P positive regulation of epithelial cell migration
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0019898 C extrinsic component of membrane
GO:0019904 F protein domain specific binding
GO:0022408 P negative regulation of cell-cell adhesion
GO:0030036 P actin cytoskeleton organization
GO:0030054 C cell junction
GO:0031032 P actomyosin structure organization
GO:0031252 C cell leading edge
GO:0032091 P negative regulation of protein binding
GO:0032092 P positive regulation of protein binding
GO:0032525 P somite rostral/caudal axis specification
GO:0032587 C ruffle membrane
GO:0048318 P axial mesoderm development
GO:0048319 P axial mesoderm morphogenesis
GO:0048339 P paraxial mesoderm development
GO:0048617 P embryonic foregut morphogenesis
GO:0051894 P positive regulation of focal adhesion assembly
GO:0070201 P regulation of establishment of protein localization
GO:0070986 P left/right axis specification
GO:0071560 P cellular response to transforming growth factor beta stimulus
887 O_BomoASG1079_complete:A_BomoASG_c6524_g1_i1
119bp
888 O_BomoASG107_internal:A_BomoASG_c633_g1_i1
107bp
889 O_BomoASG10800_complete:A_BomoASG_c26574_g1_i2
467bp
 band_4.1-like_protein_5_[Bombyx_mori]
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0001837 P epithelial to mesenchymal transition
GO:0001839 P neural plate morphogenesis
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0003382 P epithelial cell morphogenesis
GO:0003383 P apical constriction
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005925 C focal adhesion
GO:0006931 P substrate-dependent cell migration, cell attachment to substrate
GO:0007398 P ectoderm development
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0007509 P mesoderm migration involved in gastrulation
GO:0008092 F cytoskeletal protein binding
GO:0009826 P unidimensional cell growth
GO:0010608 P posttranscriptional regulation of gene expression
GO:0010634 P positive regulation of epithelial cell migration
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0019898 C extrinsic component of membrane
GO:0019904 F protein domain specific binding
GO:0022408 P negative regulation of cell-cell adhesion
GO:0030036 P actin cytoskeleton organization
GO:0030054 C cell junction
GO:0031032 P actomyosin structure organization
GO:0031252 C cell leading edge
GO:0032091 P negative regulation of protein binding
GO:0032092 P positive regulation of protein binding
GO:0032525 P somite rostral/caudal axis specification
GO:0032587 C ruffle membrane
GO:0048318 P axial mesoderm development
GO:0048319 P axial mesoderm morphogenesis
GO:0048339 P paraxial mesoderm development
GO:0048617 P embryonic foregut morphogenesis
GO:0051894 P positive regulation of focal adhesion assembly
GO:0070201 P regulation of establishment of protein localization
GO:0070986 P left/right axis specification
GO:0071560 P cellular response to transforming growth factor beta stimulus
890 O_BomoASG10801_internal:A_BomoASG_c26576_g1_i1
406bp
 probable_ATP-dependent_RNA_helicase_spindle-E_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007140 P male meiotic nuclear division
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0009566 P fertilization
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0034587 P piRNA metabolic process
GO:0043046 P DNA methylation involved in gamete generation
GO:0043186 C P granule
GO:0044822 F RNA binding
GO:0051321 P meiotic cell cycle
GO:0071547 C piP-body
891 O_BomoASG10802_3prime_partial:A_BomoASG_c26579_g1_i1
511bp
 uncharacterized_protein_LOC110372035_isoform_X1_[Helicoverpa_armigera]
892 O_BomoASG10803_complete:A_BomoASG_c26579_g1_i1
182bp
893 O_BomoASG10804_internal:A_BomoASG_c26579_g1_i2
378bp
 PREDICTED:_uncharacterized_protein_LOC106142635_isoform_X1_[Amyelois_transitella]
894 O_BomoASG10805_complete:A_BomoASG_c26579_g1_i2
182bp
895 O_BomoASG10806_internal:A_BomoASG_c26580_g1_i1
310bp
 lipoma-preferred_partner_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0008270 F zinc ion binding
GO:0030054 C cell junction
GO:0046872 F metal ion binding
896 O_BomoASG10807_3prime_partial:A_BomoASG_c26580_g1_i2
384bp
 lipoma-preferred_partner_homolog_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0008270 F zinc ion binding
GO:0030054 C cell junction
GO:0046872 F metal ion binding
897 O_BomoASG10808_complete:A_BomoASG_c26581_g1_i1
117bp
898 O_BomoASG10809_3prime_partial:A_BomoASG_c26585_g1_i1
132bp
 protein_groucho_isoform_X7_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008134 F transcription factor binding
GO:0016055 P Wnt signaling pathway
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0043234 C protein-containing complex
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0070491 F DNA-binding transcription factor binding
GO:0071837 F HMG box domain binding
GO:0071906 F CRD domain binding
GO:0090090 P negative regulation of canonical Wnt signaling pathway
899 O_BomoASG1080_complete:A_BomoASG_c6525_g1_i1
101bp
 small_integral_membrane_protein_14_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
900 O_BomoASG10810_3prime_partial:A_BomoASG_c26585_g1_i2
145bp
 protein_groucho_isoform_X5_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0003677 F DNA binding
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007015 P actin filament organization
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008134 F transcription factor binding
GO:0016055 P Wnt signaling pathway
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0043234 C protein-containing complex
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0070491 F DNA-binding transcription factor binding
GO:0071837 F HMG box domain binding
GO:0071906 F CRD domain binding
GO:0090090 P negative regulation of canonical Wnt signaling pathway
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