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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8581 O_BomoASG17724_complete:A_BomoASG_c29962_g1_i2
200bp
 cuticular_protein_RR-2_motif_131_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008010 F structural constituent of chitin-based larval cuticle
GO:0008061 F chitin binding
GO:0008150 P biological_process
GO:0030023 F extracellular matrix constituent conferring elasticity
GO:0031012 C extracellular matrix
GO:0032992 C protein-carbohydrate complex
GO:0040003 P chitin-based cuticle development
GO:0042302 F structural constituent of cuticle
8582 O_BomoASG17725_complete:A_BomoASG_c29962_g1_i2
178bp
8583 O_BomoASG17726_complete:A_BomoASG_c29963_g1_i1
201bp
 ABC_transporter_G_family_member_20_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0044351 P macropinocytosis
GO:0055085 P transmembrane transport
8584 O_BomoASG17727_complete:A_BomoASG_c29963_g1_i2
712bp
 ABC_transporter_G_family_member_23_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0044351 P macropinocytosis
GO:0055085 P transmembrane transport
8585 O_BomoASG17728_complete:A_BomoASG_c29963_g1_i2
143bp
8586 O_BomoASG17729_5prime_partial:A_BomoASG_c29964_g1_i2
224bp
 BTB/POZ_domain-containing_protein_KCTD5_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0032403 F protein-containing complex binding
GO:0051260 P protein homooligomerization
8587 O_BomoASG1772_internal:A_BomoASG_c11423_g1_i1
142bp
 C-Maf-inducing_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
8588 O_BomoASG17730_3prime_partial:A_BomoASG_c29966_g1_i1
555bp
 uncharacterized_protein_LOC101743410_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0043547 P positive regulation of GTPase activity
8589 O_BomoASG17731_5prime_partial:A_BomoASG_c29966_g1_i1
127bp
8590 O_BomoASG17732_internal:A_BomoASG_c29966_g1_i2
270bp
 uncharacterized_protein_LOC101743410_[Bombyx_mori]
GO:0007165 P signal transduction
8591 O_BomoASG17733_5prime_partial:A_BomoASG_c29966_g1_i2
127bp
8592 O_BomoASG17734_internal:A_BomoASG_c29966_g1_i3
203bp
 uncharacterized_protein_LOC101743410_[Bombyx_mori]
GO:0007165 P signal transduction
8593 O_BomoASG17735_5prime_partial:A_BomoASG_c29966_g1_i3
127bp
8594 O_BomoASG17736_internal:A_BomoASG_c29966_g1_i4
346bp
 uncharacterized_protein_LOC101743410_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0043547 P positive regulation of GTPase activity
8595 O_BomoASG17737_5prime_partial:A_BomoASG_c29966_g1_i4
127bp
8596 O_BomoASG17738_complete:A_BomoASG_c29967_g1_i1
358bp
 leucine-rich_repeat-containing_protein_58_[Bombyx_mori]
8597 O_BomoASG17739_complete:A_BomoASG_c29968_g1_i2
164bp
 tRNA-specific_adenosine_deaminase_2_[Bombyx_mori]
GO:0002100 P tRNA wobble adenosine to inosine editing
GO:0003824 F catalytic activity
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008251 F tRNA-specific adenosine deaminase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0052717 F tRNA-specific adenosine-34 deaminase activity
GO:0052718 C tRNA-specific adenosine-34 deaminase complex
8598 O_BomoASG1773_internal:A_BomoASG_c11466_g1_i1
247bp
 uncharacterized_protein_LOC101741429_[Bombyx_mori]
8599 O_BomoASG17740_complete:A_BomoASG_c29968_g1_i2
105bp
 single-strand_selective_monofunctional_uracil-DNA_glycosylase_[Bombyx_mori]
GO:0000702 F oxidized base lesion DNA N-glycosylase activity
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0031981 C nuclear lumen
8600 O_BomoASG17741_complete:A_BomoASG_c29968_g1_i4
164bp
 tRNA-specific_adenosine_deaminase_2_[Bombyx_mori]
GO:0002100 P tRNA wobble adenosine to inosine editing
GO:0003824 F catalytic activity
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008251 F tRNA-specific adenosine deaminase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0052717 F tRNA-specific adenosine-34 deaminase activity
GO:0052718 C tRNA-specific adenosine-34 deaminase complex
8601 O_BomoASG17742_complete:A_BomoASG_c29968_g1_i4
105bp
 single-strand_selective_monofunctional_uracil-DNA_glycosylase_[Bombyx_mori]
GO:0000702 F oxidized base lesion DNA N-glycosylase activity
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0031981 C nuclear lumen
8602 O_BomoASG17743_complete:A_BomoASG_c29968_g1_i5
164bp
 tRNA-specific_adenosine_deaminase_2_[Bombyx_mori]
GO:0002100 P tRNA wobble adenosine to inosine editing
GO:0003824 F catalytic activity
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008251 F tRNA-specific adenosine deaminase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0052717 F tRNA-specific adenosine-34 deaminase activity
GO:0052718 C tRNA-specific adenosine-34 deaminase complex
8603 O_BomoASG17744_complete:A_BomoASG_c29968_g1_i5
105bp
 single-strand_selective_monofunctional_uracil-DNA_glycosylase_[Bombyx_mori]
GO:0000702 F oxidized base lesion DNA N-glycosylase activity
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0031981 C nuclear lumen
8604 O_BomoASG17745_complete:A_BomoASG_c29968_g1_i6
164bp
 tRNA-specific_adenosine_deaminase_2_[Bombyx_mori]
GO:0002100 P tRNA wobble adenosine to inosine editing
GO:0003824 F catalytic activity
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0008251 F tRNA-specific adenosine deaminase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0052717 F tRNA-specific adenosine-34 deaminase activity
GO:0052718 C tRNA-specific adenosine-34 deaminase complex
8605 O_BomoASG17746_3prime_partial:A_BomoASG_c29969_g1_i1
948bp
 LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0070939 C Dsl1/NZR complex
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
8606 O_BomoASG17747_complete:A_BomoASG_c29969_g1_i1
150bp
8607 O_BomoASG17748_internal:A_BomoASG_c29969_g1_i2
772bp
 LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0070939 C Dsl1/NZR complex
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
8608 O_BomoASG17749_complete:A_BomoASG_c29969_g1_i2
150bp
8609 O_BomoASG1774_internal:A_BomoASG_c11471_g1_i1
115bp
 serine/threonine-protein_kinase_N_[Bombyx_mori]
8610 O_BomoASG17750_complete:A_BomoASG_c29970_g1_i1
303bp
 cytoplasmic_phosphatidylinositol_transfer_protein_1_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0008526 F phosphatidylinositol transfer activity
GO:0015914 P phospholipid transport
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