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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8461 O_BomoASG17616_5prime_partial:A_BomoASG_c29926_g1_i3
217bp
 putative_phosphatidate_phosphatase_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0005918 C septate junction
GO:0006644 P phospholipid metabolic process
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007424 P open tracheal system development
GO:0008195 F phosphatidate phosphatase activity
GO:0008354 P germ cell migration
GO:0009880 P embryonic pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019991 P septate junction assembly
GO:0035233 P germ cell repulsion
GO:0035234 P ectopic germ cell programmed cell death
GO:0042577 F lipid phosphatase activity
GO:0042803 F protein homodimerization activity
GO:0045177 C apical part of cell
GO:0045824 P negative regulation of innate immune response
GO:0046839 P phospholipid dephosphorylation
GO:0050829 P defense response to Gram-negative bacterium
8462 O_BomoASG17617_5prime_partial:A_BomoASG_c29927_g1_i2
640bp
 LOW_QUALITY_PROTEIN:_pre-mRNA-processing_factor_6_[Bombyx_mori]
GO:0000244 P spliceosomal tri-snRNP complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003674 F molecular_function
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006403 P RNA localization
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0043021 F ribonucleoprotein complex binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0050681 F androgen receptor binding
GO:0071013 C catalytic step 2 spliceosome
8463 O_BomoASG17618_complete:A_BomoASG_c29927_g1_i2
114bp
8464 O_BomoASG17619_complete:A_BomoASG_c29927_g1_i2
109bp
8465 O_BomoASG1761_complete:A_BomoASG_c11332_g1_i1
915bp
 LOW_QUALITY_PROTEIN:_AP-1_complex_subunit_beta-1_[Bombyx_mori]
GO:0003279 P cardiac septum development
GO:0003281 P ventricular septum development
GO:0005515 F protein binding
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0007507 P heart development
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030118 C clathrin coat
GO:0030119 C AP-type membrane coat adaptor complex
GO:0030131 C clathrin adaptor complex
GO:0030276 F clathrin binding
GO:0032403 F protein-containing complex binding
GO:0035904 P aorta development
GO:0043231 C intracellular membrane-bounded organelle
GO:0048268 P clathrin coat assembly
GO:0060976 P coronary vasculature development
8466 O_BomoASG17620_5prime_partial:A_BomoASG_c29927_g1_i3
801bp
 LOW_QUALITY_PROTEIN:_pre-mRNA-processing_factor_6_[Bombyx_mori]
GO:0000244 P spliceosomal tri-snRNP complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006403 P RNA localization
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0043021 F ribonucleoprotein complex binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0050681 F androgen receptor binding
GO:0071013 C catalytic step 2 spliceosome
8467 O_BomoASG17621_complete:A_BomoASG_c29927_g1_i3
114bp
8468 O_BomoASG17622_complete:A_BomoASG_c29927_g1_i3
109bp
8469 O_BomoASG17623_5prime_partial:A_BomoASG_c29928_g1_i1
115bp
 progestin_and_adipoQ_receptor_family_member_3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001933 P negative regulation of protein phosphorylation
GO:0004872 F signaling receptor activity
GO:0005794 C Golgi apparatus
GO:0010977 P negative regulation of neuron projection development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0034067 P protein localization to Golgi apparatus
GO:0043407 P negative regulation of MAP kinase activity
8470 O_BomoASG17624_5prime_partial:A_BomoASG_c29928_g1_i1
109bp
8471 O_BomoASG17625_complete:A_BomoASG_c29928_g1_i2
341bp
 progestin_and_adipoQ_receptor_family_member_3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001933 P negative regulation of protein phosphorylation
GO:0004872 F signaling receptor activity
GO:0005794 C Golgi apparatus
GO:0010977 P negative regulation of neuron projection development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0034067 P protein localization to Golgi apparatus
GO:0043407 P negative regulation of MAP kinase activity
8472 O_BomoASG17626_complete:A_BomoASG_c29928_g1_i2
185bp
8473 O_BomoASG17627_complete:A_BomoASG_c29928_g1_i3
341bp
 progestin_and_adipoQ_receptor_family_member_3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001933 P negative regulation of protein phosphorylation
GO:0004872 F signaling receptor activity
GO:0005794 C Golgi apparatus
GO:0010977 P negative regulation of neuron projection development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0034067 P protein localization to Golgi apparatus
GO:0043407 P negative regulation of MAP kinase activity
8474 O_BomoASG17628_complete:A_BomoASG_c29928_g1_i3
185bp
8475 O_BomoASG17629_5prime_partial:A_BomoASG_c29929_g1_i2
715bp
 dedicator_of_cytokinesis_protein_1_isoform_X1_[Bombyx_mori]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0007264 P small GTPase mediated signal transduction
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0017124 F SH3 domain binding
GO:0032045 C guanyl-nucleotide exchange factor complex
GO:0043547 P positive regulation of GTPase activity
8476 O_BomoASG1762_complete:A_BomoASG_c11332_g1_i1
121bp
8477 O_BomoASG17630_complete:A_BomoASG_c29929_g1_i2
110bp
8478 O_BomoASG17631_complete:A_BomoASG_c29929_g1_i2
108bp
8479 O_BomoASG17632_5prime_partial:A_BomoASG_c29929_g1_i3
483bp
 dedicator_of_cytokinesis_protein_1_isoform_X3_[Bombyx_mori]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0007264 P small GTPase mediated signal transduction
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0017124 F SH3 domain binding
GO:0032045 C guanyl-nucleotide exchange factor complex
GO:0043547 P positive regulation of GTPase activity
8480 O_BomoASG17633_complete:A_BomoASG_c29929_g1_i3
110bp
8481 O_BomoASG17634_complete:A_BomoASG_c29929_g1_i3
108bp
8482 O_BomoASG17635_complete:A_BomoASG_c29930_g1_i1
451bp
 LOW_QUALITY_PROTEIN:_zinc_finger_protein_Noc_[Bombyx_mori]
GO:0001752 P compound eye photoreceptor fate commitment
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0007424 P open tracheal system development
GO:0007430 P terminal branching, open tracheal system
GO:0008056 P ocellus development
GO:0008283 P cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0035214 P eye-antennal disc development
GO:0035218 P leg disc development
GO:0035220 P wing disc development
GO:0046872 F metal ion binding
8483 O_BomoASG17636_complete:A_BomoASG_c29930_g1_i2
451bp
 LOW_QUALITY_PROTEIN:_zinc_finger_protein_Noc_[Bombyx_mori]
GO:0001752 P compound eye photoreceptor fate commitment
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0007424 P open tracheal system development
GO:0007430 P terminal branching, open tracheal system
GO:0008056 P ocellus development
GO:0008283 P cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0035214 P eye-antennal disc development
GO:0035218 P leg disc development
GO:0035220 P wing disc development
GO:0046872 F metal ion binding
8484 O_BomoASG17637_complete:A_BomoASG_c29931_g1_i1
178bp
 uncharacterized_protein_LOC101742653_[Bombyx_mori]
8485 O_BomoASG17638_5prime_partial:A_BomoASG_c29932_g1_i1
215bp
 E3_ubiquitin-protein_ligase_NRDP1_isoform_X2_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0030318 P melanocyte differentiation
GO:0031386 F protein tag
GO:0046872 F metal ion binding
GO:0097191 P extrinsic apoptotic signaling pathway
8486 O_BomoASG17639_complete:A_BomoASG_c29932_g1_i2
316bp
 E3_ubiquitin-protein_ligase_NRDP1_isoform_X2_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0031386 F protein tag
GO:0046872 F metal ion binding
GO:0097191 P extrinsic apoptotic signaling pathway
8487 O_BomoASG1763_3prime_partial:A_BomoASG_c11333_g1_i1
122bp
 18_wheeler_precursor_[Bombyx_mori]
8488 O_BomoASG17640_3prime_partial:A_BomoASG_c29933_g1_i1
344bp
 intron-binding_protein_aquarius_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
8489 O_BomoASG17641_5prime_partial:A_BomoASG_c29934_g1_i1
180bp
 yellow-fa_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
8490 O_BomoASG17642_complete:A_BomoASG_c29934_g1_i2
460bp
 yellow-fa_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
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