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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8371 O_BomoASG17535_complete:A_BomoASG_c29885_g2_i6
215bp
8372 O_BomoASG17536_complete:A_BomoASG_c29885_g2_i6
102bp
8373 O_BomoASG17537_complete:A_BomoASG_c29886_g1_i1
223bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
8374 O_BomoASG17538_3prime_partial:A_BomoASG_c29886_g1_i1
137bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
8375 O_BomoASG17539_3prime_partial:A_BomoASG_c29886_g1_i2
137bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
8376 O_BomoASG1753_internal:A_BomoASG_c11287_g1_i1
127bp
 LOW_QUALITY_PROTEIN:_mediator_of_RNA_polymerase_II_transcription_subunit_14_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016592 C mediator complex
GO:0030518 P intracellular steroid hormone receptor signaling pathway
GO:0070847 C core mediator complex
8377 O_BomoASG17540_3prime_partial:A_BomoASG_c29886_g1_i3
137bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
8378 O_BomoASG17541_5prime_partial:A_BomoASG_c29886_g1_i3
130bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030166 P proteoglycan biosynthetic process
GO:0046872 F metal ion binding
GO:0048701 P embryonic cranial skeleton morphogenesis
8379 O_BomoASG17542_internal:A_BomoASG_c29887_g1_i1
267bp
 talin-1_[Bombyx_mori]
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
8380 O_BomoASG17543_5prime_partial:A_BomoASG_c29887_g1_i1
202bp
8381 O_BomoASG17544_3prime_partial:A_BomoASG_c29887_g1_i1
102bp
8382 O_BomoASG17545_complete:A_BomoASG_c29889_g1_i1
246bp
 DID_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0030335 P positive regulation of cell migration
GO:0033588 C elongator holoenzyme complex
8383 O_BomoASG17546_5prime_partial:A_BomoASG_c29889_g1_i2
254bp
 DID_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0030335 P positive regulation of cell migration
GO:0033588 C elongator holoenzyme complex
8384 O_BomoASG17547_complete:A_BomoASG_c29889_g1_i3
258bp
 DID_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0030335 P positive regulation of cell migration
GO:0033588 C elongator holoenzyme complex
8385 O_BomoASG17548_complete:A_BomoASG_c29889_g1_i4
246bp
 DID_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0030335 P positive regulation of cell migration
GO:0033588 C elongator holoenzyme complex
8386 O_BomoASG17549_complete:A_BomoASG_c29890_g1_i1
335bp
 replication_factor_C_(activator_1)_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0019899 F enzyme binding
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
8387 O_BomoASG1754_internal:A_BomoASG_c11301_g1_i1
213bp
 PREDICTED:_uncharacterized_protein_LOC105564750,_partial_[Vollenhovia_emeryi]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8388 O_BomoASG17550_complete:A_BomoASG_c29890_g1_i2
264bp
 replication_factor_C_(activator_1)_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0019899 F enzyme binding
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
8389 O_BomoASG17551_5prime_partial:A_BomoASG_c29890_g1_i3
298bp
 replication_factor_C_(activator_1)_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0019899 F enzyme binding
GO:0031390 C Ctf18 RFC-like complex
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
8390 O_BomoASG17552_5prime_partial:A_BomoASG_c29891_g1_i1
241bp
 aladin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0007612 P learning
GO:0009566 P fertilization
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0046822 P regulation of nucleocytoplasmic transport
GO:0051028 P mRNA transport
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
8391 O_BomoASG17553_complete:A_BomoASG_c29891_g1_i1
140bp
8392 O_BomoASG17554_internal:A_BomoASG_c29892_g1_i1
320bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X4_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8393 O_BomoASG17555_5prime_partial:A_BomoASG_c29894_g1_i1
186bp
 uncharacterized_protein_LOC101741715_[Bombyx_mori]
8394 O_BomoASG17556_complete:A_BomoASG_c29894_g1_i1
119bp
8395 O_BomoASG17557_5prime_partial:A_BomoASG_c29897_g1_i2
181bp
 U2_snRNP-associated_SURP_motif-containing_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006396 P RNA processing
GO:0008150 P biological_process
GO:0044822 F RNA binding
8396 O_BomoASG17558_complete:A_BomoASG_c29897_g1_i2
120bp
8397 O_BomoASG17559_complete:A_BomoASG_c29902_g2_i2
330bp
 stimulator_of_interferon_genes_protein_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002218 P activation of innate immune response
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032481 P positive regulation of type I interferon production
GO:0035438 F cyclic-di-GMP binding
GO:0061507 F 2',3'-cyclic GMP-AMP binding
8398 O_BomoASG1755_internal:A_BomoASG_c11303_g1_i1
120bp
 uncharacterized_protein_LOC101745471_isoform_X2_[Bombyx_mori]
8399 O_BomoASG17560_complete:A_BomoASG_c29902_g2_i4
279bp
 uncharacterized_protein_LOC101740268_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002218 P activation of innate immune response
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032481 P positive regulation of type I interferon production
GO:0035438 F cyclic-di-GMP binding
GO:0061507 F 2',3'-cyclic GMP-AMP binding
8400 O_BomoASG17561_internal:A_BomoASG_c29904_g1_i1
542bp
 probable_28S_rRNA_(cytosine-C(5))-methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
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