SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/32479
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7951 O_BomoASG17157_5prime_partial:A_BomoASG_c29746_g1_i1
102bp
7952 O_BomoASG17158_5prime_partial:A_BomoASG_c29746_g1_i2
102bp
7953 O_BomoASG17159_5prime_partial:A_BomoASG_c29748_g1_i2
1080bp
 E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
7954 O_BomoASG1715_internal:A_BomoASG_c10858_g1_i1
127bp
 uncharacterized_protein_LOC105841651_isoform_X4_[Bombyx_mori]
7955 O_BomoASG17160_complete:A_BomoASG_c29748_g1_i2
192bp
7956 O_BomoASG17161_complete:A_BomoASG_c29748_g1_i2
148bp
7957 O_BomoASG17162_complete:A_BomoASG_c29748_g1_i2
147bp
7958 O_BomoASG17163_complete:A_BomoASG_c29748_g1_i2
125bp
7959 O_BomoASG17164_5prime_partial:A_BomoASG_c29748_g1_i3
1085bp
 E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
7960 O_BomoASG17165_complete:A_BomoASG_c29748_g1_i3
192bp
7961 O_BomoASG17166_complete:A_BomoASG_c29748_g1_i3
148bp
7962 O_BomoASG17167_complete:A_BomoASG_c29748_g1_i3
147bp
7963 O_BomoASG17168_complete:A_BomoASG_c29748_g1_i3
125bp
7964 O_BomoASG17169_5prime_partial:A_BomoASG_c29748_g1_i5
1081bp
 E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
7965 O_BomoASG1716_internal:A_BomoASG_c10866_g1_i1
109bp
 kinesin-like_protein_KLP2_[Bombyx_mori]
7966 O_BomoASG17170_complete:A_BomoASG_c29748_g1_i5
192bp
7967 O_BomoASG17171_complete:A_BomoASG_c29748_g1_i5
148bp
7968 O_BomoASG17172_complete:A_BomoASG_c29748_g1_i5
147bp
7969 O_BomoASG17173_complete:A_BomoASG_c29748_g1_i5
125bp
7970 O_BomoASG17174_internal:A_BomoASG_c29749_g1_i1
352bp
 WW_domain-binding_protein_11_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0008599 F protein phosphatase regulator activity
GO:0016607 C nuclear speck
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0050699 F WW domain binding
GO:0050790 P regulation of catalytic activity
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
7971 O_BomoASG17175_complete:A_BomoASG_c29749_g1_i1
106bp
7972 O_BomoASG17176_3prime_partial:A_BomoASG_c29749_g1_i2
367bp
 WW_domain-binding_protein_11_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0008599 F protein phosphatase regulator activity
GO:0016607 C nuclear speck
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0050699 F WW domain binding
GO:0050790 P regulation of catalytic activity
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
7973 O_BomoASG17177_complete:A_BomoASG_c29749_g1_i2
106bp
7974 O_BomoASG17178_3prime_partial:A_BomoASG_c29750_g1_i1
629bp
 meiosis_arrest_female_protein_1_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005777 C peroxisome
GO:0010468 P regulation of gene expression
GO:0030154 P cell differentiation
GO:0048477 P oogenesis
GO:0051321 P meiotic cell cycle
7975 O_BomoASG17179_complete:A_BomoASG_c29750_g1_i1
122bp
7976 O_BomoASG1717_internal:A_BomoASG_c10880_g1_i1
171bp
 stearoyl-CoA_desaturase_5_[Bombyx_mori]
GO:0004768 F stearoyl-CoA 9-desaturase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006636 P unsaturated fatty acid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
7977 O_BomoASG17180_complete:A_BomoASG_c29750_g1_i1
121bp
7978 O_BomoASG17181_internal:A_BomoASG_c29750_g1_i2
392bp
 meiosis_arrest_female_protein_1_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005777 C peroxisome
GO:0010468 P regulation of gene expression
GO:0030154 P cell differentiation
GO:0048477 P oogenesis
GO:0051321 P meiotic cell cycle
7979 O_BomoASG17182_3prime_partial:A_BomoASG_c29750_g1_i3
981bp
 meiosis_arrest_female_protein_1_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005777 C peroxisome
GO:0010468 P regulation of gene expression
GO:0030154 P cell differentiation
GO:0048477 P oogenesis
GO:0051321 P meiotic cell cycle
7980 O_BomoASG17183_complete:A_BomoASG_c29750_g1_i3
122bp
previous next from show/32479

- SilkBase 1999-2023 -