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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7861 O_BomoASG17076_complete:A_BomoASG_c29712_g1_i2
457bp
 uncharacterized_protein_LOC101742999_[Bombyx_mori]
7862 O_BomoASG17077_5prime_partial:A_BomoASG_c29712_g1_i4
531bp
 uncharacterized_protein_LOC101742999_[Bombyx_mori]
GO:0000790 C chromatin
GO:0002039 F p53 binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007599 P hemostasis
GO:0007611 P learning or memory
GO:0007626 P locomotory behavior
GO:0008270 F zinc ion binding
GO:0008298 P intracellular mRNA localization
GO:0010609 P mRNA localization resulting in posttranscriptional regulation of gene expression
GO:0030220 P platelet formation
GO:0030425 C dendrite
GO:0035855 P megakaryocyte development
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:0045600 P positive regulation of fat cell differentiation
GO:0046872 F metal ion binding
GO:0070889 P platelet alpha granule organization
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:1902164 P positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:1902166 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:2000765 P regulation of cytoplasmic translation
7863 O_BomoASG17078_complete:A_BomoASG_c29715_g1_i1
493bp
 histone-lysine_N-methyltransferase_ASHR1_[Bombyx_mori]
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0000993 F RNA polymerase II complex binding
GO:0001162 F RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006334 P nucleosome assembly
GO:0006469 P negative regulation of protein kinase activity
GO:0008168 F methyltransferase activity
GO:0014904 P myotube cell development
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0034968 P histone lysine methylation
GO:0045184 P establishment of protein localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0071549 P cellular response to dexamethasone stimulus
7864 O_BomoASG17079_3prime_partial:A_BomoASG_c29716_g1_i1
214bp
 iron-sulfur_cluster_co-chaperone_protein_HscB,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051087 F chaperone binding
GO:0051259 P protein complex oligomerization
7865 O_BomoASG1707_complete:A_BomoASG_c10812_g1_i1
114bp
7866 O_BomoASG17080_3prime_partial:A_BomoASG_c29716_g1_i2
214bp
 iron-sulfur_cluster_co-chaperone_protein_HscB,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051087 F chaperone binding
GO:0051259 P protein complex oligomerization
7867 O_BomoASG17081_internal:A_BomoASG_c29719_g1_i1
212bp
 DNA_replication_licensing_factor_Mcm2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0008283 P cell population proliferation
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0030261 P chromosome condensation
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0051301 P cell division
7868 O_BomoASG17082_internal:A_BomoASG_c29719_g1_i2
649bp
 DNA_replication_licensing_factor_Mcm2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0008283 P cell population proliferation
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0030261 P chromosome condensation
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0051301 P cell division
7869 O_BomoASG17083_internal:A_BomoASG_c29719_g1_i3
504bp
 DNA_replication_licensing_factor_Mcm2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0008283 P cell population proliferation
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0030261 P chromosome condensation
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0051301 P cell division
7870 O_BomoASG17084_internal:A_BomoASG_c29719_g1_i4
184bp
 DNA_replication_licensing_factor_Mcm2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0008283 P cell population proliferation
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0030261 P chromosome condensation
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0051301 P cell division
7871 O_BomoASG17085_5prime_partial:A_BomoASG_c29719_g1_i5
515bp
 DNA_replication_licensing_factor_Mcm2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0008283 P cell population proliferation
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0030261 P chromosome condensation
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0051301 P cell division
7872 O_BomoASG17086_3prime_partial:A_BomoASG_c29720_g1_i1
549bp
 uncharacterized_protein_LOC101738636_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
GO:0042308 P negative regulation of protein import into nucleus
GO:0046872 F metal ion binding
7873 O_BomoASG17087_complete:A_BomoASG_c29720_g1_i1
101bp
7874 O_BomoASG17088_3prime_partial:A_BomoASG_c29720_g1_i2
716bp
 uncharacterized_protein_LOC101738636_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
GO:0042308 P negative regulation of protein import into nucleus
GO:0046872 F metal ion binding
7875 O_BomoASG17089_complete:A_BomoASG_c29720_g1_i2
101bp
7876 O_BomoASG1708_3prime_partial:A_BomoASG_c10829_g1_i1
100bp
 uncharacterized_protein_LOC110386797_[Bombyx_mori]
7877 O_BomoASG17090_3prime_partial:A_BomoASG_c29721_g1_i1
141bp
 uncharacterized_protein_LOC101742249_isoform_X2_[Bombyx_mori]
7878 O_BomoASG17091_3prime_partial:A_BomoASG_c29721_g1_i2
141bp
 uncharacterized_protein_LOC101742249_isoform_X2_[Bombyx_mori]
7879 O_BomoASG17092_3prime_partial:A_BomoASG_c29721_g1_i4
141bp
 uncharacterized_protein_LOC101742249_isoform_X2_[Bombyx_mori]
7880 O_BomoASG17093_5prime_partial:A_BomoASG_c29722_g1_i1
336bp
 uncharacterized_protein_LOC101740084_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0043956 F 3-hydroxypropionyl-CoA dehydratase activity
7881 O_BomoASG17094_complete:A_BomoASG_c29722_g1_i2
255bp
 uncharacterized_protein_LOC101740084_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0043956 F 3-hydroxypropionyl-CoA dehydratase activity
7882 O_BomoASG17095_complete:A_BomoASG_c29723_g1_i1
340bp
 protein_held_out_wings_isoform_X2_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
7883 O_BomoASG17096_complete:A_BomoASG_c29723_g1_i1
155bp
7884 O_BomoASG17097_complete:A_BomoASG_c29723_g1_i1
140bp
 AAEL007338-PA_[Aedes_aegypti]
7885 O_BomoASG17098_complete:A_BomoASG_c29723_g1_i1
101bp
7886 O_BomoASG17099_complete:A_BomoASG_c29723_g1_i5
322bp
 protein_held_out_wings_isoform_X2_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
7887 O_BomoASG1709_internal:A_BomoASG_c10831_g1_i1
171bp
 peregrin,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0043966 P histone H3 acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070776 C MOZ/MORF histone acetyltransferase complex
GO:1901796 P regulation of signal transduction by p53 class mediator
7888 O_BomoASG170_complete:A_BomoASG_c1334_g1_i1
217bp
 glutathione_S-transferase_1,_isoform_C-like_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016829 F lyase activity
GO:0018833 F DDT-dehydrochlorinase activity
7889 O_BomoASG17100_complete:A_BomoASG_c29723_g1_i5
155bp
7890 O_BomoASG17101_complete:A_BomoASG_c29723_g1_i5
140bp
 AAEL007338-PA_[Aedes_aegypti]
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