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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7621 O_BomoASG16860_complete:A_BomoASG_c29629_g1_i3
100bp
7622 O_BomoASG16861_complete:A_BomoASG_c29629_g1_i3
100bp
7623 O_BomoASG16862_complete:A_BomoASG_c29629_g1_i4
1365bp
 fibrosin-1-like_protein_isoform_X6_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0060013 P righting reflex
GO:0098582 P innate vocalization behavior
GO:2000620 P positive regulation of histone H4-K16 acetylation
7624 O_BomoASG16863_complete:A_BomoASG_c29629_g1_i4
124bp
7625 O_BomoASG16864_complete:A_BomoASG_c29629_g1_i4
118bp
7626 O_BomoASG16865_complete:A_BomoASG_c29629_g1_i4
112bp
7627 O_BomoASG16866_complete:A_BomoASG_c29629_g1_i4
100bp
7628 O_BomoASG16867_complete:A_BomoASG_c29629_g1_i4
100bp
7629 O_BomoASG16868_5prime_partial:A_BomoASG_c29631_g1_i2
429bp
 uncharacterized_protein_LOC101738884_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008283 P cell population proliferation
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0051301 P cell division
7630 O_BomoASG16869_3prime_partial:A_BomoASG_c29631_g1_i2
271bp
7631 O_BomoASG1686_5prime_partial:A_BomoASG_c10655_g1_i1
124bp
7632 O_BomoASG16870_complete:A_BomoASG_c29631_g1_i2
173bp
7633 O_BomoASG16871_complete:A_BomoASG_c29631_g1_i2
118bp
7634 O_BomoASG16872_5prime_partial:A_BomoASG_c29632_g1_i1
115bp
 uncharacterized_protein_LOC101738609_isoform_X1_[Bombyx_mori]
7635 O_BomoASG16873_complete:A_BomoASG_c29632_g1_i2
166bp
 uncharacterized_protein_LOC101738609_isoform_X1_[Bombyx_mori]
7636 O_BomoASG16874_complete:A_BomoASG_c29633_g1_i1
504bp
 potential_E3_ubiquitin-protein_ligase_ariadne-1_isoform_X1_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
7637 O_BomoASG16875_complete:A_BomoASG_c29633_g1_i1
102bp
 Os09g0559150,_partial_[Oryza_sativa_Japonica_Group]
7638 O_BomoASG16876_internal:A_BomoASG_c29634_g1_i1
393bp
 coiled-coil_domain-containing_protein_130_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
7639 O_BomoASG16877_internal:A_BomoASG_c29634_g1_i2
326bp
 coiled-coil_domain-containing_protein_130_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
7640 O_BomoASG16878_3prime_partial:A_BomoASG_c29634_g1_i3
410bp
 coiled-coil_domain-containing_protein_130_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
7641 O_BomoASG16879_complete:A_BomoASG_c29635_g1_i1
141bp
7642 O_BomoASG1687_internal:A_BomoASG_c10657_g1_i1
205bp
 eIF-2-alpha_kinase_GCN2_isoform_X2_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0002250 P adaptive immune response
GO:0002286 P T cell activation involved in immune response
GO:0002376 P immune system process
GO:0002821 P positive regulation of adaptive immune response
GO:0003723 F RNA binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004694 F eukaryotic translation initiation factor 2alpha kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007399 P nervous system development
GO:0007612 P learning
GO:0007616 P long-term memory
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
GO:0016032 P viral process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019081 P viral translation
GO:0022626 C cytosolic ribosome
GO:0032057 P negative regulation of translational initiation in response to stress
GO:0032792 P negative regulation of CREB transcription factor activity
GO:0034198 P cellular response to amino acid starvation
GO:0034644 P cellular response to UV
GO:0036492 P eiF2alpha phosphorylation in response to endoplasmic reticulum stress
GO:0039520 P induction by virus of host autophagy
GO:0044828 P negative regulation by host of viral genome replication
GO:0045665 P negative regulation of neuron differentiation
GO:0045947 P negative regulation of translational initiation
GO:0046777 P protein autophosphorylation
GO:0051607 P defense response to virus
GO:0060259 P regulation of feeding behavior
GO:0060733 P GCN2-mediated signaling
GO:0070417 P cellular response to cold
GO:0071264 P positive regulation of translational initiation in response to starvation
GO:1900273 P positive regulation of long-term synaptic potentiation
GO:1990138 P neuron projection extension
GO:1990253 P cellular response to leucine starvation
7643 O_BomoASG16880_complete:A_BomoASG_c29635_g1_i1
135bp
 calcium_and_integrin_binding_protein_CIB_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0030027 C lamellipodium
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0032433 C filopodium tip
GO:0032587 C ruffle membrane
GO:0042383 C sarcolemma
GO:0042995 C cell projection
GO:0048471 C perinuclear region of cytoplasm
GO:0051301 P cell division
7644 O_BomoASG16881_complete:A_BomoASG_c29635_g1_i2
186bp
 calcium_and_integrin_binding_protein_CIB_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0030027 C lamellipodium
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0032433 C filopodium tip
GO:0032587 C ruffle membrane
GO:0042383 C sarcolemma
GO:0042995 C cell projection
GO:0048471 C perinuclear region of cytoplasm
GO:0051301 P cell division
7645 O_BomoASG16882_complete:A_BomoASG_c29635_g1_i2
141bp
7646 O_BomoASG16883_complete:A_BomoASG_c29636_g2_i1
449bp
 transmembrane_protein_209_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7647 O_BomoASG16884_complete:A_BomoASG_c29636_g2_i1
103bp
7648 O_BomoASG16885_complete:A_BomoASG_c29636_g2_i2
449bp
 transmembrane_protein_209_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7649 O_BomoASG16886_complete:A_BomoASG_c29636_g2_i2
112bp
7650 O_BomoASG16887_complete:A_BomoASG_c29636_g2_i2
103bp
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