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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7351 O_BomoASG16617_complete:A_BomoASG_c29538_g1_i1
470bp
 zinc_finger_protein_62_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7352 O_BomoASG16618_5prime_partial:A_BomoASG_c29538_g1_i2
274bp
 zinc_finger_protein_62_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
7353 O_BomoASG16619_5prime_partial:A_BomoASG_c29538_g1_i3
299bp
 zinc_finger_protein_62_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
7354 O_BomoASG1661_internal:A_BomoASG_c10507_g1_i1
126bp
 PREDICTED:_myosin_light_chain_kinase,_smooth_muscle-like_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0001725 C stress fiber
GO:0002230 P positive regulation of defense response to virus by host
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004687 F myosin light chain kinase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0006468 P protein phosphorylation
GO:0006939 P smooth muscle contraction
GO:0014820 P tonic smooth muscle contraction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
GO:0030027 C lamellipodium
GO:0030335 P positive regulation of cell migration
GO:0032060 P bleb assembly
GO:0032154 C cleavage furrow
GO:0035690 P cellular response to xenobiotic stimulus
GO:0035865 P cellular response to potassium ion
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0051928 P positive regulation of calcium ion transport
GO:0060414 P aorta smooth muscle tissue morphogenesis
GO:0070062 C extracellular exosome
GO:0071277 P cellular response to calcium ion
GO:0071476 P cellular hypotonic response
GO:0090303 P positive regulation of wound healing
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
7355 O_BomoASG16620_5prime_partial:A_BomoASG_c29539_g1_i1
104bp
 group_XIIA_secretory_phospholipase_A2_isoform_X6_[Bombyx_mori]
GO:0004623 F phospholipase A2 activity
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
7356 O_BomoASG16621_internal:A_BomoASG_c29539_g2_i1
142bp
 group_XIIA_secretory_phospholipase_A2_isoform_X6_[Bombyx_mori]
GO:0004623 F phospholipase A2 activity
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0016042 P lipid catabolic process
GO:0046872 F metal ion binding
7357 O_BomoASG16622_complete:A_BomoASG_c29540_g1_i1
240bp
7358 O_BomoASG16623_complete:A_BomoASG_c29540_g1_i1
229bp
 gamma-glutamylcysteine_ligase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004357 F glutamate-cysteine ligase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006534 P cysteine metabolic process
GO:0006536 P glutamate metabolic process
GO:0006749 P glutathione metabolic process
GO:0006750 P glutathione biosynthetic process
GO:0006979 P response to oxidative stress
GO:0008637 P apoptotic mitochondrial changes
GO:0009408 P response to heat
GO:0009410 P response to xenobiotic stimulus
GO:0009725 P response to hormone
GO:0016595 F glutamate binding
GO:0016874 F ligase activity
GO:0017109 C glutamate-cysteine ligase complex
GO:0019852 P L-ascorbic acid metabolic process
GO:0031397 P negative regulation of protein ubiquitination
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043531 F ADP binding
GO:0045454 P cell redox homeostasis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046685 P response to arsenic-containing substance
GO:0046982 F protein heterodimerization activity
GO:0050662 F obsolete coenzyme binding
GO:0050880 P blood vessel diameter maintenance
GO:0051409 P response to nitrosative stress
GO:0051900 P regulation of mitochondrial depolarization
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
7359 O_BomoASG16624_complete:A_BomoASG_c29540_g1_i1
107bp
7360 O_BomoASG16625_complete:A_BomoASG_c29540_g1_i2
670bp
 glutamate--cysteine_ligase_catalytic_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004357 F glutamate-cysteine ligase activity
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006534 P cysteine metabolic process
GO:0006536 P glutamate metabolic process
GO:0006749 P glutathione metabolic process
GO:0006750 P glutathione biosynthetic process
GO:0006979 P response to oxidative stress
GO:0008637 P apoptotic mitochondrial changes
GO:0009408 P response to heat
GO:0009410 P response to xenobiotic stimulus
GO:0009725 P response to hormone
GO:0016595 F glutamate binding
GO:0016874 F ligase activity
GO:0017109 C glutamate-cysteine ligase complex
GO:0019852 P L-ascorbic acid metabolic process
GO:0031397 P negative regulation of protein ubiquitination
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043531 F ADP binding
GO:0045454 P cell redox homeostasis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046685 P response to arsenic-containing substance
GO:0046982 F protein heterodimerization activity
GO:0050662 F obsolete coenzyme binding
GO:0050880 P blood vessel diameter maintenance
GO:0051409 P response to nitrosative stress
GO:0051900 P regulation of mitochondrial depolarization
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
7361 O_BomoASG16626_complete:A_BomoASG_c29540_g1_i2
242bp
7362 O_BomoASG16627_complete:A_BomoASG_c29540_g1_i2
107bp
7363 O_BomoASG16628_3prime_partial:A_BomoASG_c29541_g2_i2
266bp
 solute_carrier_family_46_member_3_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
7364 O_BomoASG16629_complete:A_BomoASG_c29541_g3_i1
117bp
7365 O_BomoASG1662_internal:A_BomoASG_c10507_g1_i1
125bp
 hypothetical_protein_ALC53_03163_[Atta_colombica]
7366 O_BomoASG16630_5prime_partial:A_BomoASG_c29541_g3_i2
168bp
 solute_carrier_family_46_member_3_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
7367 O_BomoASG16631_complete:A_BomoASG_c29541_g3_i2
117bp
7368 O_BomoASG16632_5prime_partial:A_BomoASG_c29541_g3_i3
149bp
 solute_carrier_family_46_member_3_isoform_X2_[Bombyx_mori]
7369 O_BomoASG16633_complete:A_BomoASG_c29541_g3_i3
117bp
7370 O_BomoASG16634_5prime_partial:A_BomoASG_c29541_g3_i4
242bp
 solute_carrier_family_46_member_3_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
7371 O_BomoASG16635_complete:A_BomoASG_c29541_g3_i4
117bp
7372 O_BomoASG16636_5prime_partial:A_BomoASG_c29542_g1_i1
392bp
 probable_ATP-dependent_RNA_helicase_Dbp73D_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0042254 P ribosome biogenesis
7373 O_BomoASG16637_3prime_partial:A_BomoASG_c29542_g2_i1
153bp
 probable_ATP-dependent_RNA_helicase_Dbp73D_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
7374 O_BomoASG16638_internal:A_BomoASG_c29542_g1_i3
443bp
 probable_ATP-dependent_RNA_helicase_Dbp73D_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0042254 P ribosome biogenesis
7375 O_BomoASG16639_3prime_partial:A_BomoASG_c29544_g1_i1
214bp
 zinc_finger_protein_568_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7376 O_BomoASG1663_5prime_partial:A_BomoASG_c10507_g1_i1
107bp
7377 O_BomoASG16640_complete:A_BomoASG_c29544_g1_i1
152bp
7378 O_BomoASG16641_5prime_partial:A_BomoASG_c29544_g1_i2
332bp
 zinc_finger_protein_568_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7379 O_BomoASG16642_3prime_partial:A_BomoASG_c29544_g1_i3
647bp
 zinc_finger_protein_568_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7380 O_BomoASG16643_complete:A_BomoASG_c29544_g1_i3
152bp
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