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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7111 O_BomoASG16400_5prime_partial:A_BomoASG_c29452_g1_i5
398bp
 uncharacterized_protein_LOC101736424_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0008150 P biological_process
GO:0070062 C extracellular exosome
GO:0072562 C blood microparticle
7112 O_BomoASG16401_internal:A_BomoASG_c29453_g1_i1
362bp
 zinc_finger_protein_567_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
7113 O_BomoASG16402_internal:A_BomoASG_c29453_g1_i2
312bp
 zinc_finger_protein_567_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
7114 O_BomoASG16403_internal:A_BomoASG_c29453_g1_i3
515bp
 zinc_finger_protein_567_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
7115 O_BomoASG16404_internal:A_BomoASG_c29454_g1_i1
445bp
 putative_DNA_helicase_Ino80_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000790 C chromatin
GO:0000975 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0040034 P regulation of development, heterochronic
GO:0045892 P negative regulation of transcription, DNA-templated
7116 O_BomoASG16405_internal:A_BomoASG_c29454_g2_i1
136bp
 putative_DNA_helicase_Ino80_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000790 C chromatin
GO:0000975 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0040034 P regulation of development, heterochronic
GO:0045892 P negative regulation of transcription, DNA-templated
7117 O_BomoASG16406_5prime_partial:A_BomoASG_c29454_g2_i1
105bp
7118 O_BomoASG16407_internal:A_BomoASG_c29454_g3_i1
312bp
 putative_DNA_helicase_Ino80_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000790 C chromatin
GO:0000975 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0040034 P regulation of development, heterochronic
GO:0045892 P negative regulation of transcription, DNA-templated
7119 O_BomoASG16408_5prime_partial:A_BomoASG_c29454_g3_i1
213bp
 hypothetical_protein_TOPH_02880_[Tolypocladium_ophioglossoides_CBS_100239]
7120 O_BomoASG16409_5prime_partial:A_BomoASG_c29454_g3_i1
124bp
7121 O_BomoASG1640_3prime_partial:A_BomoASG_c10335_g1_i2
122bp
 uncharacterized_protein_LOC101735819_isoform_X1_[Bombyx_mori]
7122 O_BomoASG16410_internal:A_BomoASG_c29454_g3_i3
211bp
 hypothetical_protein_TOPH_02880_[Tolypocladium_ophioglossoides_CBS_100239]
7123 O_BomoASG16411_internal:A_BomoASG_c29454_g3_i3
211bp
 putative_DNA_helicase_Ino80_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000790 C chromatin
GO:0000975 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0040034 P regulation of development, heterochronic
GO:0045892 P negative regulation of transcription, DNA-templated
7124 O_BomoASG16412_5prime_partial:A_BomoASG_c29454_g3_i3
124bp
7125 O_BomoASG16413_5prime_partial:A_BomoASG_c29455_g1_i1
389bp
 short-chain_specific_acyl-CoA_dehydrogenase,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0004085 F butyryl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0031966 C mitochondrial membrane
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0042594 P response to starvation
GO:0046359 P butyrate catabolic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0051289 P protein homotetramerization
GO:0051384 P response to glucocorticoid
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
7126 O_BomoASG16414_complete:A_BomoASG_c29455_g1_i1
125bp
 hypothetical_protein_ACD_75C01044G0002_[uncultured_bacterium]
7127 O_BomoASG16415_complete:A_BomoASG_c29455_g1_i2
409bp
 short-chain_specific_acyl-CoA_dehydrogenase,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0004085 F butyryl-CoA dehydrogenase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0042594 P response to starvation
GO:0046359 P butyrate catabolic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0051289 P protein homotetramerization
GO:0051384 P response to glucocorticoid
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
7128 O_BomoASG16416_complete:A_BomoASG_c29455_g1_i2
125bp
 hypothetical_protein_ACD_75C01044G0002_[uncultured_bacterium]
7129 O_BomoASG16417_complete:A_BomoASG_c29456_g1_i1
693bp
 glycogen_[starch]_synthase_[Bombyx_mori]
GO:0004373 F glycogen (starch) synthase activity
GO:0005776 C autophagosome
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009744 P response to sucrose
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0031410 C cytoplasmic vesicle
GO:0045819 P positive regulation of glycogen catabolic process
GO:0061723 P glycophagy
GO:0071329 P cellular response to sucrose stimulus
7130 O_BomoASG16418_complete:A_BomoASG_c29456_g1_i1
161bp
7131 O_BomoASG16419_complete:A_BomoASG_c29456_g1_i1
125bp
7132 O_BomoASG1641_internal:A_BomoASG_c10359_g1_i1
99bp
 PREDICTED:_USP6_N-terminal-like_protein_isoform_X3_[Papilio_xuthus]
GO:0005096 F GTPase activator activity
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0007030 P Golgi organization
GO:0012505 C endomembrane system
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0019068 P virion assembly
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0032588 C trans-Golgi network membrane
GO:0035526 P retrograde transport, plasma membrane to Golgi
GO:0048227 P plasma membrane to endosome transport
GO:0090630 P activation of GTPase activity
GO:1902017 P regulation of cilium assembly
GO:1903358 P regulation of Golgi organization
7133 O_BomoASG16420_5prime_partial:A_BomoASG_c29456_g1_i2
405bp
 glycogen_[starch]_synthase_[Bombyx_mori]
GO:0004373 F glycogen (starch) synthase activity
GO:0005776 C autophagosome
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009744 P response to sucrose
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0031410 C cytoplasmic vesicle
GO:0045819 P positive regulation of glycogen catabolic process
GO:0061723 P glycophagy
GO:0071329 P cellular response to sucrose stimulus
7134 O_BomoASG16421_complete:A_BomoASG_c29456_g1_i2
125bp
7135 O_BomoASG16422_complete:A_BomoASG_c29456_g1_i5
693bp
 glycogen_[starch]_synthase_[Bombyx_mori]
GO:0004373 F glycogen (starch) synthase activity
GO:0005776 C autophagosome
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009744 P response to sucrose
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0031410 C cytoplasmic vesicle
GO:0045819 P positive regulation of glycogen catabolic process
GO:0061723 P glycophagy
GO:0071329 P cellular response to sucrose stimulus
7136 O_BomoASG16423_complete:A_BomoASG_c29456_g1_i5
161bp
7137 O_BomoASG16424_complete:A_BomoASG_c29456_g1_i5
125bp
7138 O_BomoASG16425_5prime_partial:A_BomoASG_c29457_g1_i1
252bp
 uncharacterized_protein_LOC101744637_[Bombyx_mori]
7139 O_BomoASG16426_complete:A_BomoASG_c29460_g1_i1
343bp
 uncharacterized_protein_LOC110386361_[Bombyx_mori]
7140 O_BomoASG16427_complete:A_BomoASG_c29460_g1_i2
253bp
 PREDICTED:_uncharacterized_protein_LOC106133815_[Amyelois_transitella]
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