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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6901 O_BomoASG16211_complete:A_BomoASG_c29377_g1_i1
418bp
 pyruvate_dehydrogenase_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004740 F pyruvate dehydrogenase (acetyl-transferring) kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005975 P carbohydrate metabolic process
GO:0006006 P glucose metabolic process
GO:0006090 P pyruvate metabolic process
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
6902 O_BomoASG16212_5prime_partial:A_BomoASG_c29378_g2_i1
119bp
 RNA_exonuclease_4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
6903 O_BomoASG16213_5prime_partial:A_BomoASG_c29379_g1_i1
257bp
 protein_melted_isoform_X3_[Bombyx_mori]
GO:0001708 P cell fate specification
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0007422 P peripheral nervous system development
GO:0008152 P metabolic process
GO:0008286 P insulin receptor signaling pathway
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0030730 P sequestering of triglyceride
GO:0035091 F phosphatidylinositol binding
GO:0045464 P R8 cell fate specification
GO:2001020 P regulation of response to DNA damage stimulus
6904 O_BomoASG16214_5prime_partial:A_BomoASG_c29379_g1_i1
188bp
6905 O_BomoASG16215_3prime_partial:A_BomoASG_c29379_g1_i1
182bp
6906 O_BomoASG16216_5prime_partial:A_BomoASG_c29379_g1_i1
175bp
 protein_melted_isoform_X4_[Bombyx_mori]
6907 O_BomoASG16217_complete:A_BomoASG_c29380_g1_i1
203bp
 origin_recognition_complex_subunit_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000808 C origin recognition complex
GO:0003677 F DNA binding
GO:0003688 F DNA replication origin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005664 C nuclear origin of replication recognition complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0015629 C actin cytoskeleton
6908 O_BomoASG16218_complete:A_BomoASG_c29380_g1_i1
101bp
6909 O_BomoASG16219_5prime_partial:A_BomoASG_c29380_g1_i2
475bp
 origin_recognition_complex_subunit_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000808 C origin recognition complex
GO:0003677 F DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005664 C nuclear origin of replication recognition complex
GO:0006260 P DNA replication
6910 O_BomoASG1621_internal:A_BomoASG_c10065_g1_i1
122bp
6911 O_BomoASG16220_complete:A_BomoASG_c29380_g1_i2
106bp
6912 O_BomoASG16221_complete:A_BomoASG_c29380_g1_i2
101bp
6913 O_BomoASG16222_5prime_partial:A_BomoASG_c29380_g1_i3
406bp
 origin_recognition_complex_subunit_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000808 C origin recognition complex
GO:0003677 F DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005664 C nuclear origin of replication recognition complex
GO:0006260 P DNA replication
6914 O_BomoASG16223_complete:A_BomoASG_c29380_g1_i3
106bp
6915 O_BomoASG16224_complete:A_BomoASG_c29380_g1_i3
101bp
6916 O_BomoASG16225_internal:A_BomoASG_c29381_g1_i2
354bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106709759_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
6917 O_BomoASG16226_internal:A_BomoASG_c29381_g1_i3
474bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Plutella_xylostella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
6918 O_BomoASG16227_3prime_partial:A_BomoASG_c29382_g1_i1
139bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
6919 O_BomoASG16228_internal:A_BomoASG_c29382_g1_i2
253bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
6920 O_BomoASG16229_5prime_partial:A_BomoASG_c29383_g1_i1
458bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
6921 O_BomoASG1622_internal:A_BomoASG_c10065_g1_i1
122bp
 uncharacterized_protein_LOC110385294_[Bombyx_mori]
6922 O_BomoASG16230_complete:A_BomoASG_c29383_g1_i1
112bp
6923 O_BomoASG16231_complete:A_BomoASG_c29383_g1_i2
724bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
6924 O_BomoASG16232_complete:A_BomoASG_c29383_g1_i2
112bp
6925 O_BomoASG16233_3prime_partial:A_BomoASG_c29383_g1_i3
157bp
 cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
6926 O_BomoASG16234_complete:A_BomoASG_c29384_g1_i1
530bp
 zinc_finger_protein_2_isoform_X21_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
6927 O_BomoASG16235_complete:A_BomoASG_c29384_g1_i1
104bp
6928 O_BomoASG16236_5prime_partial:A_BomoASG_c29384_g1_i2
338bp
 zinc_finger_protein_431_isoform_X9_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
6929 O_BomoASG16237_complete:A_BomoASG_c29384_g1_i2
104bp
6930 O_BomoASG16238_complete:A_BomoASG_c29384_g1_i3
511bp
 zinc_finger_protein_2_isoform_X21_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
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