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Search ORF from Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

6751

O_BomoASG16077_3prime_partial:A_BomoASG_c29325_g1_i1

388bp

Bomo_Chr24

uncharacterized_protein_LOC101737719_[Bombyx_mori]

6752

O_BomoASG16078_5prime_partial:A_BomoASG_c29326_g1_i2

216bp

Bomo_Chr19

lymphokine-activated_killer_T-cell-originated_protein_kinase_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0001933	P	negative regulation of protein phosphorylation
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0006468	P	protein phosphorylation
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0032435	P	negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032873	P	negative regulation of stress-activated MAPK cascade
GO:0034644	P	cellular response to UV
GO:0050728	P	negative regulation of inflammatory response

6753

O_BomoASG16079_complete:A_BomoASG_c29326_g1_i5

321bp

Bomo_Chr19

lymphokine-activated_killer_T-cell-originated_protein_kinase_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0001933	P	negative regulation of protein phosphorylation
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0006468	P	protein phosphorylation
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0032435	P	negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032873	P	negative regulation of stress-activated MAPK cascade
GO:0034644	P	cellular response to UV
GO:0050728	P	negative regulation of inflammatory response

6754

O_BomoASG1607_internal:A_BomoASG_c9979_g1_i1

310bp

Bomo_Chr7

kinesin-like_protein_KLP2_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0000278	P	mitotic cell cycle
GO:0000922	C	spindle pole
GO:0001578	P	microtubule bundle formation
GO:0003774	F	cytoskeletal motor activity
GO:0003777	F	microtubule motor activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005783	C	endoplasmic reticulum
GO:0005794	C	Golgi apparatus
GO:0005813	C	centrosome
GO:0005818	C	aster
GO:0005819	C	spindle
GO:0005856	C	cytoskeleton
GO:0005871	C	kinesin complex
GO:0005873	C	plus-end kinesin complex
GO:0005874	C	microtubule
GO:0005875	C	microtubule associated complex
GO:0007018	P	microtubule-based movement
GO:0007030	P	Golgi organization
GO:0007049	P	cell cycle
GO:0007052	P	mitotic spindle organization
GO:0007059	P	chromosome segregation
GO:0007067	P	mitotic cell cycle
GO:0007100	P	mitotic centrosome separation
GO:0008017	F	microtubule binding
GO:0008152	P	metabolic process
GO:0008574	F	plus-end-directed microtubule motor activity
GO:0009306	P	protein secretion
GO:0022008	P	neurogenesis
GO:0031535	P	plus-end directed microtubule sliding
GO:0042998	P	positive regulation of Golgi to plasma membrane protein transport
GO:0045169	C	fusome
GO:0045478	P	fusome organization
GO:0051289	P	protein homotetramerization
GO:0051298	P	centrosome duplication
GO:0051299	P	centrosome separation
GO:0051301	P	cell division
GO:0072686	C	mitotic spindle
GO:0090307	P	mitotic spindle assembly
GO:0097431	C	mitotic spindle pole
GO:1990498	C	mitotic spindle microtubule

6755

O_BomoASG16080_complete:A_BomoASG_c29326_g1_i5

107bp

Bomo_Chr19

6756

O_BomoASG16081_complete:A_BomoASG_c29327_g1_i1

249bp

Bomo_Chr5

PREDICTED:_flap_endonuclease_1-like_isoform_X2_[Polistes_dominula]

GO:0003677	F	DNA binding
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0005634	C	nucleus
GO:0006310	P	DNA recombination
GO:0015074	P	DNA integration
GO:0016787	F	hydrolase activity
GO:0046872	F	metal ion binding
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis

6757

O_BomoASG16082_complete:A_BomoASG_c29327_g1_i1

165bp

Bomo_Chr5

thyroid_adenoma-associated_protein_homolog_[Bombyx_mori]

6758

O_BomoASG16083_3prime_partial:A_BomoASG_c29328_g1_i1

309bp

Bomo_Chr25

DNA-directed_RNA_polymerases_I_and_III_subunit_RPAC1_isoform_X1_[Bombyx_mori]

GO:0000183	P	rDNA heterochromatin assembly
GO:0001054	F	RNA polymerase I activity
GO:0001056	F	RNA polymerase III activity
GO:0003677	F	DNA binding
GO:0003899	F	DNA-directed 5'-3' RNA polymerase activity
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005666	C	RNA polymerase III complex
GO:0005736	C	RNA polymerase I complex
GO:0006351	P	transcription, DNA-templated
GO:0006361	P	transcription initiation from RNA polymerase I promoter
GO:0006383	P	transcription by RNA polymerase III
GO:0008150	P	biological_process
GO:0034587	P	piRNA metabolic process
GO:0046983	F	protein dimerization activity

6759

O_BomoASG16084_internal:A_BomoASG_c29328_g1_i2

120bp

Bomo_Chr25

DNA-directed_RNA_polymerases_I_and_III_subunit_RPAC1_isoform_X1_[Bombyx_mori]

GO:0000183	P	rDNA heterochromatin assembly
GO:0001054	F	RNA polymerase I activity
GO:0001056	F	RNA polymerase III activity
GO:0003677	F	DNA binding
GO:0003899	F	DNA-directed 5'-3' RNA polymerase activity
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005666	C	RNA polymerase III complex
GO:0005736	C	RNA polymerase I complex
GO:0006351	P	transcription, DNA-templated
GO:0006361	P	transcription initiation from RNA polymerase I promoter
GO:0006383	P	transcription by RNA polymerase III
GO:0008150	P	biological_process
GO:0034587	P	piRNA metabolic process
GO:0046983	F	protein dimerization activity

6760

O_BomoASG16085_internal:A_BomoASG_c29329_g1_i1

417bp

Bomo_Chr10

helicase_domino-like_[Helicoverpa_armigera]

GO:0000166	F	nucleotide binding
GO:0003677	F	DNA binding
GO:0003713	F	transcription coactivator activity
GO:0004386	F	helicase activity
GO:0004402	F	histone acetyltransferase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005794	C	Golgi apparatus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006357	P	regulation of transcription by RNA polymerase II
GO:0016032	P	viral process
GO:0016568	P	chromatin organization
GO:0016573	P	histone acetylation
GO:0016787	F	hydrolase activity
GO:0043234	C	protein-containing complex
GO:0048471	C	perinuclear region of cytoplasm

6761

O_BomoASG16086_3prime_partial:A_BomoASG_c29329_g1_i1

147bp

Bomo_Chr10

6762

O_BomoASG16087_internal:A_BomoASG_c29329_g1_i2

502bp

Bomo_Chr10

PREDICTED:_helicase_domino,_partial_[Papilio_xuthus]

GO:0000123	C	histone acetyltransferase complex
GO:0000166	F	nucleotide binding
GO:0000381	P	regulation of alternative mRNA splicing, via spliceosome
GO:0002165	P	instar larval or pupal development
GO:0003677	F	DNA binding
GO:0004386	F	helicase activity
GO:0004402	F	histone acetyltransferase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0006325	P	chromatin organization
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007049	P	cell cycle
GO:0007275	P	multicellular organism development
GO:0008094	F	ATP-dependent activity, acting on DNA
GO:0008283	P	cell population proliferation
GO:0010629	P	negative regulation of gene expression
GO:0010906	P	regulation of glucose metabolic process
GO:0016458	P	obsolete gene silencing
GO:0016568	P	chromatin organization
GO:0016573	P	histone acetylation
GO:0016787	F	hydrolase activity
GO:0019233	P	sensory perception of pain
GO:0022008	P	neurogenesis
GO:0030097	P	hemopoiesis
GO:0030154	P	cell differentiation
GO:0035019	P	somatic stem cell population maintenance
GO:0035207	P	negative regulation of hemocyte proliferation
GO:0035222	P	wing disc pattern formation
GO:0035267	C	NuA4 histone acetyltransferase complex
GO:0036098	P	male germ-line stem cell population maintenance
GO:0043486	P	histone exchange
GO:0045747	P	positive regulation of Notch signaling pathway
GO:0048477	P	oogenesis
GO:0048813	P	dendrite morphogenesis
GO:0070983	P	dendrite guidance
GO:2000637	P	positive regulation of gene silencing by miRNA