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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6121 O_BomoASG1550_internal:A_BomoASG_c9570_g1_i1
362bp
 neurofibromin_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0001649 P osteoblast differentiation
GO:0001656 P metanephros development
GO:0001666 P response to hypoxia
GO:0001889 P liver development
GO:0001952 P regulation of cell-matrix adhesion
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0007154 P cell communication
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007507 P heart development
GO:0008017 F microtubule binding
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0008542 P visual learning
GO:0014044 P Schwann cell development
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0021510 P spinal cord development
GO:0021897 P forebrain astrocyte development
GO:0021987 P cerebral cortex development
GO:0022011 P myelination in peripheral nervous system
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0030325 P adrenal gland development
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031210 F phosphatidylcholine binding
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0042060 P wound healing
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043234 C protein-containing complex
GO:0043407 P negative regulation of MAP kinase activity
GO:0043409 P negative regulation of MAPK cascade
GO:0043473 P pigmentation
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0045124 P regulation of bone resorption
GO:0045545 F syndecan binding
GO:0045664 P regulation of neuron differentiation
GO:0045685 P regulation of glial cell differentiation
GO:0045762 P positive regulation of adenylate cyclase activity
GO:0045765 P regulation of angiogenesis
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0048147 P negative regulation of fibroblast proliferation
GO:0048485 P sympathetic nervous system development
GO:0048593 P camera-type eye morphogenesis
GO:0048715 P negative regulation of oligodendrocyte differentiation
GO:0048745 P smooth muscle tissue development
GO:0048844 P artery morphogenesis
GO:0048853 P forebrain morphogenesis
6122 O_BomoASG15510_complete:A_BomoASG_c29116_g1_i1
348bp
 formin-like_protein_5_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
6123 O_BomoASG15511_complete:A_BomoASG_c29116_g1_i3
348bp
 formin-like_protein_5_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
6124 O_BomoASG15512_complete:A_BomoASG_c29116_g1_i3
230bp
 formin-like_protein_5_isoform_X2_[Bombyx_mori]
6125 O_BomoASG15513_complete:A_BomoASG_c29116_g1_i4
612bp
 formin-like_protein_5_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
6126 O_BomoASG15514_complete:A_BomoASG_c29116_g1_i5
182bp
 formin-like_protein_5_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
6127 O_BomoASG15515_3prime_partial:A_BomoASG_c29117_g1_i1
491bp
 fizzy-related_protein_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010997 F anaphase-promoting complex binding
GO:0016567 P protein ubiquitination
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031965 C nuclear membrane
GO:0040020 P regulation of meiotic nuclear division
GO:0045732 P positive regulation of protein catabolic process
GO:0051301 P cell division
GO:0051488 P positive regulation of ubiquitin protein ligase activity
GO:0070306 P lens fiber cell differentiation
GO:0090344 P negative regulation of cell aging
GO:0097027 F ubiquitin-protein transferase activator activity
6128 O_BomoASG15516_5prime_partial:A_BomoASG_c29119_g1_i1
465bp
 uncharacterized_protein_LOC101740927_[Bombyx_mori]
6129 O_BomoASG15517_complete:A_BomoASG_c29120_g1_i2
175bp
6130 O_BomoASG15518_complete:A_BomoASG_c29120_g1_i2
125bp
 uncharacterized_protein_LOC101744677_[Bombyx_mori]
6131 O_BomoASG15519_complete:A_BomoASG_c29120_g1_i3
243bp
 uncharacterized_protein_LOC101744677_[Bombyx_mori]
6132 O_BomoASG1551_complete:A_BomoASG_c9570_g1_i1
192bp
6133 O_BomoASG15520_complete:A_BomoASG_c29120_g1_i3
157bp
6134 O_BomoASG15521_5prime_partial:A_BomoASG_c29121_g1_i1
321bp
 transcription_initiation_factor_IIB_isoform_X1_[Bombyx_mori]
GO:0001174 P transcriptional start site selection at RNA polymerase II promoter
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0017025 F TBP-class protein binding
GO:0046872 F metal ion binding
GO:0051101 P regulation of DNA binding
GO:0097550 C transcription preinitiation complex
6135 O_BomoASG15522_complete:A_BomoASG_c29123_g1_i2
324bp
 short-chain_dehydrogenase/reductase_family_16C_member_6_[Bombyx_mori]
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0043616 P keratinocyte proliferation
GO:0050908 P detection of light stimulus involved in visual perception
GO:0055114 P obsolete oxidation-reduction process
6136 O_BomoASG15523_5prime_partial:A_BomoASG_c29123_g1_i3
303bp
 short-chain_dehydrogenase/reductase_family_16C_member_6_[Bombyx_mori]
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0043616 P keratinocyte proliferation
GO:0050908 P detection of light stimulus involved in visual perception
GO:0055114 P obsolete oxidation-reduction process
6137 O_BomoASG15524_5prime_partial:A_BomoASG_c29125_g1_i1
253bp
 tetratricopeptide_repeat_protein_21B_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
6138 O_BomoASG15525_internal:A_BomoASG_c29126_g1_i1
667bp
 protein_Daple_[Bombyx_mori]
GO:0001932 P regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016055 P Wnt signaling pathway
GO:0030165 F PDZ domain binding
GO:0031098 P stress-activated protein kinase signaling cascade
GO:0031648 P protein destabilization
GO:0043621 F protein self-association
GO:0051260 P protein homooligomerization
6139 O_BomoASG15526_3prime_partial:A_BomoASG_c29127_g1_i1
591bp
 lisH_domain-containing_protein_C1711.05,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004864 F protein phosphatase inhibitor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0043086 P negative regulation of catalytic activity
GO:0046872 F metal ion binding
6140 O_BomoASG15527_complete:A_BomoASG_c29127_g1_i2
1015bp
 lisH_domain-containing_protein_C1711.05,_partial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004864 F protein phosphatase inhibitor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0043086 P negative regulation of catalytic activity
GO:0046872 F metal ion binding
6141 O_BomoASG15528_complete:A_BomoASG_c29127_g1_i2
174bp
6142 O_BomoASG15529_complete:A_BomoASG_c29127_g1_i2
124bp
6143 O_BomoASG1552_complete:A_BomoASG_c9570_g1_i1
131bp
6144 O_BomoASG15530_complete:A_BomoASG_c29127_g1_i3
317bp
 hypothetical_protein_KGM_214218_[Danaus_plexippus_plexippus]
GO:0005623 C obsolete cell
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016787 F hydrolase activity
GO:0030246 F carbohydrate binding
GO:0030643 P cellular phosphate ion homeostasis
GO:0046475 P glycerophospholipid catabolic process
GO:0047389 F glycerophosphocholine phosphodiesterase activity
GO:2001070 F starch binding
6145 O_BomoASG15531_complete:A_BomoASG_c29127_g1_i3
287bp
 PREDICTED:_glycerophosphocholine_phosphodiesterase_GPCPD1_isoform_X2_[Papilio_polytes]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016787 F hydrolase activity
GO:0030246 F carbohydrate binding
GO:0030643 P cellular phosphate ion homeostasis
GO:0046475 P glycerophospholipid catabolic process
GO:0047389 F glycerophosphocholine phosphodiesterase activity
GO:2001070 F starch binding
6146 O_BomoASG15532_complete:A_BomoASG_c29127_g1_i3
101bp
6147 O_BomoASG15533_5prime_partial:A_BomoASG_c29127_g1_i4
439bp
 PREDICTED:_glycerophosphocholine_phosphodiesterase_GPCPD1_isoform_X2_[Papilio_polytes]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
GO:0008889 F glycerophosphodiester phosphodiesterase activity
GO:0016787 F hydrolase activity
GO:0030246 F carbohydrate binding
GO:0030643 P cellular phosphate ion homeostasis
GO:0046475 P glycerophospholipid catabolic process
GO:0047389 F glycerophosphocholine phosphodiesterase activity
GO:2001070 F starch binding
6148 O_BomoASG15534_complete:A_BomoASG_c29127_g1_i4
101bp
6149 O_BomoASG15535_internal:A_BomoASG_c29129_g2_i1
197bp
 coiled-coil_domain-containing_protein_CG32809_isoform_X10_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
6150 O_BomoASG15536_5prime_partial:A_BomoASG_c29129_g2_i2
175bp
 coiled-coil_domain-containing_protein_CG32809_isoform_X11_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
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