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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5791 O_BomoASG15212_internal:A_BomoASG_c28977_g1_i2
633bp
 cysteine-rich_protein_2-binding_protein_isoform_X1_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0016573 P histone acetylation
GO:0043966 P histone H3 acetylation
5792 O_BomoASG15213_internal:A_BomoASG_c28977_g1_i3
181bp
 cysteine-rich_protein_2-binding_protein_isoform_X2_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0008080 F N-acetyltransferase activity
GO:0016573 P histone acetylation
GO:0043966 P histone H3 acetylation
5793 O_BomoASG15214_internal:A_BomoASG_c28979_g1_i1
374bp
 uncharacterized_protein_LOC101744334_[Bombyx_mori]
5794 O_BomoASG15215_internal:A_BomoASG_c28979_g1_i2
446bp
 uncharacterized_protein_LOC101744334_[Bombyx_mori]
5795 O_BomoASG15216_5prime_partial:A_BomoASG_c28980_g1_i1
428bp
 RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
5796 O_BomoASG15217_complete:A_BomoASG_c28980_g1_i1
162bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Trachymyrmex_cornetzi]
5797 O_BomoASG15218_internal:A_BomoASG_c28980_g1_i2
171bp
 hypothetical_protein_RR46_01242_[Papilio_xuthus]
5798 O_BomoASG15219_5prime_partial:A_BomoASG_c28980_g1_i3
428bp
 RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
5799 O_BomoASG1521_internal:A_BomoASG_c9445_g1_i1
164bp
 kinesin-like_protein_CG14535_isoform_X2_[Bombyx_mori]
5800 O_BomoASG15220_complete:A_BomoASG_c28980_g1_i3
175bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Trachymyrmex_cornetzi]
5801 O_BomoASG15221_internal:A_BomoASG_c28980_g1_i4
102bp
 pol_protein_[Danaus_plexippus_plexippus]
5802 O_BomoASG15222_complete:A_BomoASG_c28981_g1_i1
923bp
 tyrosine-protein_kinase_Src42A-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006099 P tricarboxylic acid cycle
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007395 P dorsal closure, spreading of leading edge cells
GO:0007411 P axon guidance
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019233 P sensory perception of pain
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0034332 P adherens junction organization
GO:0036335 P intestinal stem cell homeostasis
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042127 P regulation of cell population proliferation
GO:0042742 P defense response to bacterium
GO:0043277 P apoptotic cell clearance
GO:0045087 P innate immune response
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046529 P imaginal disc fusion, thorax closure
GO:0048749 P compound eye development
GO:0051017 P actin filament bundle assembly
GO:0090136 P epithelial cell-cell adhesion
5803 O_BomoASG15223_complete:A_BomoASG_c28981_g1_i1
166bp
5804 O_BomoASG15224_complete:A_BomoASG_c28981_g1_i1
150bp
5805 O_BomoASG15225_complete:A_BomoASG_c28981_g1_i2
508bp
 tyrosine-protein_kinase_Src42A-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0006099 P tricarboxylic acid cycle
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007391 P dorsal closure
GO:0007395 P dorsal closure, spreading of leading edge cells
GO:0007411 P axon guidance
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019233 P sensory perception of pain
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0034332 P adherens junction organization
GO:0036335 P intestinal stem cell homeostasis
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042127 P regulation of cell population proliferation
GO:0042742 P defense response to bacterium
GO:0043277 P apoptotic cell clearance
GO:0045087 P innate immune response
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046529 P imaginal disc fusion, thorax closure
GO:0048749 P compound eye development
GO:0051017 P actin filament bundle assembly
GO:0090136 P epithelial cell-cell adhesion
5806 O_BomoASG15226_complete:A_BomoASG_c28981_g1_i2
166bp
5807 O_BomoASG15227_complete:A_BomoASG_c28981_g1_i2
150bp
5808 O_BomoASG15228_3prime_partial:A_BomoASG_c28982_g1_i1
309bp
 neural_Wiskott-Aldrich_syndrome_protein_[Bombyx_mori]
GO:0002625 P regulation of T cell antigen processing and presentation
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0006461 P protein-containing complex assembly
GO:0006952 P defense response
GO:0006955 P immune response
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0008154 P actin polymerization or depolymerization
GO:0008544 P epidermis development
GO:0012506 C vesicle membrane
GO:0015629 C actin cytoskeleton
GO:0016197 P endosomal transport
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0030041 P actin filament polymerization
GO:0030048 P actin filament-based movement
GO:0030695 F GTPase regulator activity
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042110 P T cell activation
GO:0042802 F identical protein binding
GO:0043274 F phospholipase binding
GO:0050790 P regulation of catalytic activity
GO:0050852 P T cell receptor signaling pathway
GO:0070062 C extracellular exosome
GO:2000146 P negative regulation of cell motility
GO:2000601 P positive regulation of Arp2/3 complex-mediated actin nucleation
5809 O_BomoASG15229_5prime_partial:A_BomoASG_c28982_g1_i1
128bp
5810 O_BomoASG1522_3prime_partial:A_BomoASG_c9451_g1_i1
196bp
 myeloid_leukemia_factor_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0048471 C perinuclear region of cytoplasm
GO:0050821 P protein stabilization
GO:2000495 P regulation of cell proliferation involved in compound eye morphogenesis
5811 O_BomoASG15230_internal:A_BomoASG_c28983_g1_i1
167bp
 chromosome_transmission_fidelity_protein_18_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0007049 P cell cycle
5812 O_BomoASG15231_internal:A_BomoASG_c28983_g1_i2
442bp
 chromosome_transmission_fidelity_protein_18_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0007049 P cell cycle
5813 O_BomoASG15232_3prime_partial:A_BomoASG_c28983_g1_i3
464bp
 chromosome_transmission_fidelity_protein_18_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0007049 P cell cycle
5814 O_BomoASG15233_complete:A_BomoASG_c28984_g1_i1
216bp
 ATP-dependent_RNA_helicase_DDX18_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
5815 O_BomoASG15234_complete:A_BomoASG_c28984_g1_i2
216bp
 ATP-dependent_RNA_helicase_DDX18_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
5816 O_BomoASG15235_5prime_partial:A_BomoASG_c28985_g1_i1
803bp
 PREDICTED:_exosome_component_10_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000176 C nuclear exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000460 P maturation of 5.8S rRNA
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004532 F exoribonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0008408 F 3'-5' exonuclease activity
GO:0009048 P dosage compensation by inactivation of X chromosome
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0035327 C euchromatin
GO:0044237 P cellular metabolic process
GO:0044822 F RNA binding
GO:0071028 P nuclear mRNA surveillance
GO:0071034 P CUT catabolic process
GO:0071035 P nuclear polyadenylation-dependent rRNA catabolic process
GO:0071044 P histone mRNA catabolic process
GO:0071048 P nuclear mRNA surveillance
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
5817 O_BomoASG15236_complete:A_BomoASG_c28985_g1_i1
122bp
5818 O_BomoASG15237_complete:A_BomoASG_c28985_g1_i1
100bp
5819 O_BomoASG15238_3prime_partial:A_BomoASG_c28986_g1_i1
345bp
 uncharacterized_protein_LOC101746620_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007256 P obsolete activation of JNKK activity
5820 O_BomoASG15239_complete:A_BomoASG_c28986_g1_i1
111bp
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