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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
571 O_BomoASG10514_complete:A_BomoASG_c26383_g1_i2
130bp
572 O_BomoASG10515_complete:A_BomoASG_c26383_g1_i2
117bp
573 O_BomoASG10516_complete:A_BomoASG_c26384_g1_i1
480bp
 RNA-binding_protein_Nova-2_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
574 O_BomoASG10517_complete:A_BomoASG_c26384_g1_i2
492bp
 RNA-binding_protein_Nova-2_isoform_X6_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
575 O_BomoASG10518_complete:A_BomoASG_c26384_g1_i2
114bp
576 O_BomoASG10519_complete:A_BomoASG_c26384_g1_i3
535bp
 RNA-binding_protein_Nova-2_isoform_X1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
577 O_BomoASG1051_5prime_partial:A_BomoASG_c6504_g1_i1
323bp
 uncharacterized_protein_LOC100382917_[Zea_mays]
578 O_BomoASG10520_complete:A_BomoASG_c26384_g1_i3
136bp
579 O_BomoASG10521_complete:A_BomoASG_c26384_g1_i4
513bp
 RNA-binding_protein_Nova-2_isoform_X6_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
580 O_BomoASG10522_complete:A_BomoASG_c26384_g1_i4
114bp
581 O_BomoASG10523_complete:A_BomoASG_c26386_g1_i1
223bp
 transcription_factor_Adf-1_[Bombyx_mori]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007416 P synapse assembly
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007616 P long-term memory
GO:0008345 P larval locomotory behavior
GO:0008355 P olfactory learning
GO:0040011 P locomotion
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
582 O_BomoASG10524_5prime_partial:A_BomoASG_c26386_g1_i3
155bp
 transcription_factor_Adf-1_[Bombyx_mori]
583 O_BomoASG10525_3prime_partial:A_BomoASG_c26389_g1_i1
306bp
 uncharacterized_protein_LOC101737956_[Bombyx_mori]
584 O_BomoASG10526_3prime_partial:A_BomoASG_c26389_g1_i2
260bp
 uncharacterized_protein_LOC101737956_[Bombyx_mori]
585 O_BomoASG10527_internal:A_BomoASG_c26389_g2_i1
212bp
 uncharacterized_protein_LOC101737956_[Bombyx_mori]
GO:0000784 C chromosome, telomeric region
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0031848 P protection from non-homologous end joining at telomere
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0036297 P interstrand cross-link repair
GO:0051301 P cell division
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
586 O_BomoASG10528_5prime_partial:A_BomoASG_c26391_g1_i1
313bp
 PREDICTED:_uncharacterized_protein_LOC106126064_[Papilio_xuthus]
587 O_BomoASG10529_complete:A_BomoASG_c26393_g1_i1
1980bp
 uncharacterized_protein_LOC101737406_[Bombyx_mori]
588 O_BomoASG1052_complete:A_BomoASG_c6504_g1_i1
113bp
 Hypothetical_protein_GL50803_112080_[Giardia_lamblia_ATCC_50803]
589 O_BomoASG10530_complete:A_BomoASG_c26393_g1_i1
166bp
590 O_BomoASG10531_complete:A_BomoASG_c26393_g1_i1
106bp
591 O_BomoASG10532_complete:A_BomoASG_c26393_g1_i2
1980bp
 uncharacterized_protein_LOC101737406_[Bombyx_mori]
592 O_BomoASG10533_complete:A_BomoASG_c26393_g1_i2
166bp
593 O_BomoASG10534_complete:A_BomoASG_c26393_g1_i2
106bp
594 O_BomoASG10535_internal:A_BomoASG_c26399_g1_i1
392bp
 histone-lysine_N-methyltransferase_SETD1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000791 C euchromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044648 P histone H3-K4 dimethylation
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
595 O_BomoASG10536_complete:A_BomoASG_c26399_g1_i1
131bp
596 O_BomoASG10537_5prime_partial:A_BomoASG_c26399_g1_i1
113bp
597 O_BomoASG10538_internal:A_BomoASG_c26399_g1_i2
149bp
 histone-lysine_N-methyltransferase_SETD1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000791 C euchromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044648 P histone H3-K4 dimethylation
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
598 O_BomoASG10539_5prime_partial:A_BomoASG_c26399_g1_i2
113bp
599 O_BomoASG1053_internal:A_BomoASG_c6505_g1_i1
136bp
 uncharacterized_protein_LOC101737750_[Bombyx_mori]
600 O_BomoASG10540_internal:A_BomoASG_c26399_g1_i3
278bp
 histone-lysine_N-methyltransferase_SETD1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000791 C euchromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044648 P histone H3-K4 dimethylation
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
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