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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5251 O_BomoASG14727_5prime_partial:A_BomoASG_c28774_g1_i1
121bp
5252 O_BomoASG14728_complete:A_BomoASG_c28775_g1_i1
711bp
 acylamino-acid-releasing_enzyme_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
5253 O_BomoASG14729_complete:A_BomoASG_c28775_g1_i1
181bp
5254 O_BomoASG1472_internal:A_BomoASG_c9240_g1_i1
110bp
 integrase_core_domain_protein_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
5255 O_BomoASG14730_complete:A_BomoASG_c28775_g1_i2
426bp
 acylamino-acid-releasing_enzyme_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0050435 P amyloid-beta metabolic process
GO:0070062 C extracellular exosome
5256 O_BomoASG14731_complete:A_BomoASG_c28775_g1_i2
181bp
5257 O_BomoASG14732_complete:A_BomoASG_c28775_g1_i3
711bp
 acylamino-acid-releasing_enzyme_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
5258 O_BomoASG14733_complete:A_BomoASG_c28775_g1_i3
181bp
5259 O_BomoASG14734_complete:A_BomoASG_c28776_g1_i1
131bp
 HMG1/2-like_protein_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005125 F cytokine activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006954 P inflammatory response
5260 O_BomoASG14735_complete:A_BomoASG_c28776_g1_i2
217bp
 HMG1/2-like_protein_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005125 F cytokine activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006954 P inflammatory response
5261 O_BomoASG14736_complete:A_BomoASG_c28778_g1_i1
102bp
 probable_DNA_replication_complex_GINS_protein_PSF2_[Bombyx_mori]
GO:0000727 P double-strand break repair via break-induced replication
GO:0000811 C GINS complex
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0031298 C replication fork protection complex
GO:0032508 P DNA duplex unwinding
GO:0043138 F 3'-5' DNA helicase activity
GO:1902975 P mitotic DNA replication initiation
5262 O_BomoASG14737_3prime_partial:A_BomoASG_c28778_g1_i2
189bp
 probable_DNA_replication_complex_GINS_protein_PSF2_[Bombyx_mori]
GO:0000727 P double-strand break repair via break-induced replication
GO:0000811 C GINS complex
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0022008 P neurogenesis
GO:0030261 P chromosome condensation
GO:0031298 C replication fork protection complex
GO:0032508 P DNA duplex unwinding
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0043138 F 3'-5' DNA helicase activity
GO:0046331 P lateral inhibition
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1902975 P mitotic DNA replication initiation
5263 O_BomoASG14738_5prime_partial:A_BomoASG_c28779_g1_i1
385bp
 clustered_mitochondria_protein_homolog_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007005 P mitochondrion organization
GO:0048312 P intracellular distribution of mitochondria
5264 O_BomoASG14739_5prime_partial:A_BomoASG_c28779_g1_i1
242bp
5265 O_BomoASG1473_internal:A_BomoASG_c9243_g1_i1
204bp
 mucin-17_[Bombyx_mori]
5266 O_BomoASG14740_5prime_partial:A_BomoASG_c28779_g1_i1
131bp
5267 O_BomoASG14741_5prime_partial:A_BomoASG_c28779_g1_i2
441bp
 clustered_mitochondria_protein_homolog_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007005 P mitochondrion organization
GO:0048312 P intracellular distribution of mitochondria
5268 O_BomoASG14742_5prime_partial:A_BomoASG_c28779_g1_i2
242bp
5269 O_BomoASG14743_5prime_partial:A_BomoASG_c28779_g1_i2
131bp
5270 O_BomoASG14744_complete:A_BomoASG_c28781_g1_i1
105bp
 uncharacterized_protein_LOC101741558_[Bombyx_mori]
5271 O_BomoASG14745_internal:A_BomoASG_c28781_g2_i1
107bp
 uncharacterized_protein_LOC110385794_[Bombyx_mori]
5272 O_BomoASG14746_complete:A_BomoASG_c28784_g1_i1
320bp
 cell_division_cycle_2_[Bombyx_mori]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000278 P mitotic cell cycle
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007140 P male meiotic nuclear division
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0007284 P spermatogonial cell division
GO:0008315 P G2/MI transition of meiotic cell cycle
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0030707 P ovarian follicle cell development
GO:0032880 P regulation of protein localization
GO:0044818 P mitotic G2/M transition checkpoint
GO:0048142 P germarium-derived cystoblast division
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0055059 P asymmetric neuroblast division
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
5273 O_BomoASG14747_5prime_partial:A_BomoASG_c28785_g1_i1
150bp
 rho_guanine_nucleotide_exchange_factor_18_[Bombyx_mori]
5274 O_BomoASG14748_5prime_partial:A_BomoASG_c28785_g1_i1
115bp
5275 O_BomoASG14749_5prime_partial:A_BomoASG_c28785_g1_i2
177bp
 rho_guanine_nucleotide_exchange_factor_18_[Bombyx_mori]
5276 O_BomoASG1474_complete:A_BomoASG_c9245_g1_i1
195bp
 myofilin_isoform_X6_[Bombyx_mori]
5277 O_BomoASG14750_5prime_partial:A_BomoASG_c28785_g1_i2
115bp
5278 O_BomoASG14751_complete:A_BomoASG_c28786_g1_i1
1130bp
 dystroglycan_isoform_X3_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043236 F laminin binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
5279 O_BomoASG14752_complete:A_BomoASG_c28786_g1_i1
121bp
5280 O_BomoASG14753_complete:A_BomoASG_c28786_g1_i1
117bp
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