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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5191 O_BomoASG14673_complete:A_BomoASG_c28744_g1_i2
129bp
5192 O_BomoASG14674_5prime_partial:A_BomoASG_c28744_g1_i3
602bp
 homeotic_protein_female_sterile_isoform_X4_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
5193 O_BomoASG14675_complete:A_BomoASG_c28744_g1_i3
129bp
5194 O_BomoASG14676_5prime_partial:A_BomoASG_c28745_g1_i1
300bp
 uncharacterized_protein_LOC105841778_isoform_X1_[Bombyx_mori]
5195 O_BomoASG14677_complete:A_BomoASG_c28745_g1_i1
120bp
5196 O_BomoASG14678_3prime_partial:A_BomoASG_c28747_g1_i1
235bp
 PREDICTED:_uncharacterized_protein_LOC106101398_[Papilio_polytes]
GO:0001525 P angiogenesis
GO:0001570 P vasculogenesis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0007165 P signal transduction
GO:0008284 P positive regulation of cell population proliferation
GO:0010507 P negative regulation of autophagy
GO:0017016 F small GTPase binding
GO:0043087 P regulation of GTPase activity
GO:0048471 C perinuclear region of cytoplasm
GO:0048754 P branching morphogenesis of an epithelial tube
5197 O_BomoASG14679_complete:A_BomoASG_c28748_g1_i1
286bp
 lysosomal_thioesterase_PPT2_homolog_isoform_X2_[Bombyx_mori]
GO:0005764 C lysosome
GO:0008474 F palmitoyl-(protein) hydrolase activity
GO:0016787 F hydrolase activity
GO:0016790 F thiolester hydrolase activity
GO:0098599 F palmitoyl hydrolase activity
GO:0098734 P macromolecule depalmitoylation
5198 O_BomoASG1467_internal:A_BomoASG_c9225_g1_i1
101bp
 fatty_acyl-CoA_reductase_wat-like_isoform_X2_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
5199 O_BomoASG14680_complete:A_BomoASG_c28748_g1_i1
105bp
5200 O_BomoASG14681_complete:A_BomoASG_c28749_g1_i2
212bp
 mediator_of_RNA_polymerase_2_transcription_subunit_13_like_protein_[Danaus_plexippus_plexippus]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
5201 O_BomoASG14682_3prime_partial:A_BomoASG_c28749_g1_i3
229bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
5202 O_BomoASG14683_complete:A_BomoASG_c28751_g1_i1
189bp
 uncharacterized_protein_CG1161_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5203 O_BomoASG14684_complete:A_BomoASG_c28751_g1_i2
194bp
 uncharacterized_protein_CG1161_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5204 O_BomoASG14685_complete:A_BomoASG_c28751_g1_i3
189bp
 uncharacterized_protein_CG1161_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5205 O_BomoASG14686_complete:A_BomoASG_c28751_g1_i4
189bp
 uncharacterized_protein_CG1161_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5206 O_BomoASG14687_complete:A_BomoASG_c28752_g1_i3
305bp
 solute_carrier_family_25_member_51_[Helicoverpa_armigera]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5207 O_BomoASG14688_complete:A_BomoASG_c28752_g1_i4
168bp
 solute_carrier_family_25_member_51_[Helicoverpa_armigera]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5208 O_BomoASG14689_complete:A_BomoASG_c28753_g1_i1
705bp
 protein_crooked_neck_[Bombyx_mori]
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007405 P neuroblast proliferation
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007438 P oenocyte development
GO:0007443 P Malpighian tubule morphogenesis
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0044822 F RNA binding
GO:0048663 P neuron fate commitment
GO:0051298 P centrosome duplication
GO:0071010 C prespliceosome
GO:0071011 C precatalytic spliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071014 C post-mRNA release spliceosomal complex
GO:0072686 C mitotic spindle
5209 O_BomoASG1468_5prime_partial:A_BomoASG_c9227_g1_i1
353bp
 lambda-crystallin_isoform_X1_[Bombyx_mori]
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006631 P fatty acid metabolic process
GO:0016491 F oxidoreductase activity
GO:0019640 P glucuronate catabolic process to xylulose 5-phosphate
GO:0042803 F protein homodimerization activity
GO:0050104 F L-gulonate 3-dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070403 F NAD+ binding
5210 O_BomoASG14690_complete:A_BomoASG_c28754_g1_i1
901bp
 thioredoxin_domain-containing_protein_11_[Bombyx_mori]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034976 P response to endoplasmic reticulum stress
GO:0045454 P cell redox homeostasis
5211 O_BomoASG14691_complete:A_BomoASG_c28754_g1_i2
699bp
 thioredoxin_domain-containing_protein_11_[Bombyx_mori]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034976 P response to endoplasmic reticulum stress
GO:0045454 P cell redox homeostasis
5212 O_BomoASG14692_5prime_partial:A_BomoASG_c28756_g1_i1
109bp
 Bloom_syndrome_protein_homolog_isoform_X2_[Bombyx_mori]
5213 O_BomoASG14693_internal:A_BomoASG_c28756_g1_i2
132bp
 Bloom_syndrome_protein_homolog_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000403 F Y-form DNA binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0000733 P obsolete DNA strand renaturation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0009378 F four-way junction helicase activity
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:0044237 P cellular metabolic process
GO:0045003 P double-strand break repair via synthesis-dependent strand annealing
GO:1901291 P negative regulation of double-strand break repair via single-strand annealing
5214 O_BomoASG14694_5prime_partial:A_BomoASG_c28756_g1_i2
121bp
5215 O_BomoASG14695_complete:A_BomoASG_c28757_g1_i1
292bp
 probable_isoaspartyl_peptidase/L-asparaginase_GA20639_isoform_X3_[Bombyx_mori]
GO:0004067 F asparaginase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008798 F beta-aspartyl-peptidase activity
GO:0016787 F hydrolase activity
GO:0033345 P asparagine catabolic process via L-aspartate
GO:0035071 P salivary gland cell autophagic cell death
GO:0048102 P autophagic cell death
5216 O_BomoASG14696_complete:A_BomoASG_c28758_g1_i1
386bp
 patj_homolog_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0032033 F myosin II light chain binding
GO:0034332 P adherens junction organization
GO:0034334 P adherens junction maintenance
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035209 P pupal development
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045494 P photoreceptor cell maintenance
5217 O_BomoASG14697_complete:A_BomoASG_c28758_g1_i1
298bp
 patj_homolog_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0032033 F myosin II light chain binding
GO:0034332 P adherens junction organization
GO:0034334 P adherens junction maintenance
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035209 P pupal development
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045494 P photoreceptor cell maintenance
5218 O_BomoASG14698_complete:A_BomoASG_c28758_g1_i2
298bp
 patj_homolog_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0032033 F myosin II light chain binding
GO:0034332 P adherens junction organization
GO:0034334 P adherens junction maintenance
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035209 P pupal development
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045494 P photoreceptor cell maintenance
5219 O_BomoASG14699_5prime_partial:A_BomoASG_c28759_g1_i1
223bp
 histone_acetyltransferase_KAT7,_partial_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0003674 F molecular_function
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0043966 P histone H3 acetylation
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043983 P histone H4-K12 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0046872 F metal ion binding
5220 O_BomoASG1469_5prime_partial:A_BomoASG_c9231_g1_i1
169bp
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