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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5131 O_BomoASG14619_complete:A_BomoASG_c28715_g1_i1
119bp
5132 O_BomoASG1461_internal:A_BomoASG_c9196_g1_i1
205bp
 cadherin-23_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007293 P germarium-derived egg chamber formation
GO:0007295 P growth of a germarium-derived egg chamber
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0042247 P establishment of planar polarity of follicular epithelium
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045089 P positive regulation of innate immune response
GO:0045571 P negative regulation of imaginal disc growth
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050839 F cell adhesion molecule binding
GO:0060429 P epithelium development
5133 O_BomoASG14620_3prime_partial:A_BomoASG_c28715_g1_i3
387bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
5134 O_BomoASG14621_5prime_partial:A_BomoASG_c28715_g1_i3
134bp
5135 O_BomoASG14622_complete:A_BomoASG_c28715_g1_i3
119bp
5136 O_BomoASG14623_3prime_partial:A_BomoASG_c28715_g1_i4
655bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
5137 O_BomoASG14624_5prime_partial:A_BomoASG_c28715_g1_i4
134bp
5138 O_BomoASG14625_complete:A_BomoASG_c28715_g1_i4
119bp
5139 O_BomoASG14626_3prime_partial:A_BomoASG_c28715_g1_i5
387bp
 homeodomain-interacting_protein_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
5140 O_BomoASG14627_5prime_partial:A_BomoASG_c28715_g1_i5
134bp
5141 O_BomoASG14628_complete:A_BomoASG_c28715_g1_i5
115bp
5142 O_BomoASG14629_3prime_partial:A_BomoASG_c28716_g1_i1
354bp
 poly(rC)-binding_protein_3_isoform_X7_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016071 P mRNA metabolic process
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
5143 O_BomoASG1462_internal:A_BomoASG_c9201_g1_i1
149bp
 PREDICTED:_A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_7-like_[Papilio_polytes]
GO:0004175 F endopeptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0008201 F heparin binding
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010573 P vascular endothelial growth factor production
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030199 P collagen fibril organization
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0032964 P collagen biosynthetic process
GO:0043206 P supramolecular fiber organization
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1900748 P positive regulation of vascular endothelial growth factor signaling pathway
5144 O_BomoASG14630_5prime_partial:A_BomoASG_c28716_g1_i1
115bp
5145 O_BomoASG14631_complete:A_BomoASG_c28716_g1_i1
109bp
5146 O_BomoASG14632_3prime_partial:A_BomoASG_c28716_g1_i2
357bp
 poly(rC)-binding_protein_3_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016071 P mRNA metabolic process
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
5147 O_BomoASG14633_complete:A_BomoASG_c28716_g1_i2
109bp
5148 O_BomoASG14634_3prime_partial:A_BomoASG_c28716_g1_i3
352bp
 poly(rC)-binding_protein_3_isoform_X4_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016071 P mRNA metabolic process
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
5149 O_BomoASG14635_complete:A_BomoASG_c28716_g1_i3
109bp
5150 O_BomoASG14636_3prime_partial:A_BomoASG_c28717_g1_i1
162bp
 sulfite_oxidase_isoform_X1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006790 P sulfur compound metabolic process
GO:0008482 F sulfite oxidase activity
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030151 F molybdenum ion binding
GO:0042128 P nitrate assimilation
GO:0043546 F molybdopterin cofactor binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
5151 O_BomoASG14637_5prime_partial:A_BomoASG_c28717_g1_i1
148bp
5152 O_BomoASG14638_5prime_partial:A_BomoASG_c28717_g1_i1
131bp
5153 O_BomoASG14639_3prime_partial:A_BomoASG_c28717_g1_i3
383bp
 sulfite_oxidase_isoform_X1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006790 P sulfur compound metabolic process
GO:0008482 F sulfite oxidase activity
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030151 F molybdenum ion binding
GO:0042128 P nitrate assimilation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
5154 O_BomoASG1463_internal:A_BomoASG_c9213_g1_i1
142bp
 Uncharacterized_protein_OBRU01_11452_[Operophtera_brumata]
5155 O_BomoASG14640_5prime_partial:A_BomoASG_c28717_g1_i3
148bp
5156 O_BomoASG14641_5prime_partial:A_BomoASG_c28717_g1_i3
131bp
5157 O_BomoASG14642_complete:A_BomoASG_c28717_g1_i4
198bp
 sulfite_oxidase_isoform_X2_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006790 P sulfur compound metabolic process
GO:0008482 F sulfite oxidase activity
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030151 F molybdenum ion binding
GO:0042128 P nitrate assimilation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
5158 O_BomoASG14643_5prime_partial:A_BomoASG_c28718_g1_i2
120bp
 ribonuclease_P_protein_subunit_rpr2_isoform_X1_[Bombyx_mori]
GO:0004526 F ribonuclease P activity
GO:0005634 C nucleus
GO:0005655 C nucleolar ribonuclease P complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
5159 O_BomoASG14644_complete:A_BomoASG_c28718_g1_i3
122bp
 ribonuclease_P_protein_subunit_rpr2_isoform_X1_[Bombyx_mori]
GO:0004526 F ribonuclease P activity
GO:0005634 C nucleus
GO:0005655 C nucleolar ribonuclease P complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
5160 O_BomoASG14645_3prime_partial:A_BomoASG_c28721_g2_i1
306bp
 putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0005351 F carbohydrate:proton symporter activity
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006820 P anion transport
GO:0006865 P amino acid transport
GO:0015136 F sialic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015538 F sialic acid:proton symporter activity
GO:0015739 P sialic acid transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
GO:1905039 P carboxylic acid transmembrane transport
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