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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4861 O_BomoASG14376_complete:A_BomoASG_c28616_g1_i3
150bp
4862 O_BomoASG14377_complete:A_BomoASG_c28616_g1_i3
110bp
4863 O_BomoASG14378_5prime_partial:A_BomoASG_c28616_g1_i4
526bp
 LOW_QUALITY_PROTEIN:_disks_large_1_tumor_suppressor_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000132 P establishment of mitotic spindle orientation
GO:0001708 P cell fate specification
GO:0001738 P morphogenesis of a polarized epithelium
GO:0002009 P morphogenesis of an epithelium
GO:0004385 F guanylate kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005154 F epidermal growth factor receptor binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005920 C smooth septate junction
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007268 P chemical synaptic transmission
GO:0007275 P multicellular organism development
GO:0007318 P pole plasm protein localization
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0007617 P mating behavior
GO:0008049 P male courtship behavior
GO:0008104 P protein localization
GO:0008105 P protein localization
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0008328 C ionotropic glutamate receptor complex
GO:0008593 P regulation of Notch signaling pathway
GO:0010906 P regulation of glucose metabolic process
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0016335 P morphogenesis of larval imaginal disc epithelium
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0019233 P sensory perception of pain
GO:0019991 P septate junction assembly
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0030710 P regulation of border follicle cell delamination
GO:0030714 P anterior/posterior axis specification, follicular epithelium
GO:0031594 C neuromuscular junction
GO:0035255 F ionotropic glutamate receptor binding
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0042127 P regulation of cell population proliferation
GO:0042332 P gravitaxis
GO:0042734 C presynaptic membrane
GO:0043113 P receptor clustering
GO:0043195 C terminal bouton
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045175 P basal protein localization
GO:0045179 C apical cortex
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045475 P locomotor rhythm
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046037 P GMP metabolic process
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0046710 P GDP metabolic process
GO:0046956 P positive phototaxis
GO:0048471 C perinuclear region of cytoplasm
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0051294 P establishment of spindle orientation
GO:0051726 P regulation of cell cycle
GO:0060581 P cell fate commitment involved in pattern specification
GO:0061174 C type I terminal bouton
GO:0061176 C type Ib terminal bouton
GO:0097120 P receptor localization to synapse
4864 O_BomoASG14379_complete:A_BomoASG_c28616_g1_i4
150bp
4865 O_BomoASG1437_internal:A_BomoASG_c8962_g1_i1
153bp
4866 O_BomoASG14380_complete:A_BomoASG_c28616_g1_i5
752bp
 LOW_QUALITY_PROTEIN:_disks_large_1_tumor_suppressor_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000132 P establishment of mitotic spindle orientation
GO:0001708 P cell fate specification
GO:0001738 P morphogenesis of a polarized epithelium
GO:0002009 P morphogenesis of an epithelium
GO:0004385 F guanylate kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005154 F epidermal growth factor receptor binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005920 C smooth septate junction
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007268 P chemical synaptic transmission
GO:0007275 P multicellular organism development
GO:0007318 P pole plasm protein localization
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0007617 P mating behavior
GO:0008049 P male courtship behavior
GO:0008104 P protein localization
GO:0008105 P protein localization
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0008328 C ionotropic glutamate receptor complex
GO:0008593 P regulation of Notch signaling pathway
GO:0010906 P regulation of glucose metabolic process
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0016335 P morphogenesis of larval imaginal disc epithelium
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0019233 P sensory perception of pain
GO:0019991 P septate junction assembly
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0030710 P regulation of border follicle cell delamination
GO:0030714 P anterior/posterior axis specification, follicular epithelium
GO:0031594 C neuromuscular junction
GO:0035255 F ionotropic glutamate receptor binding
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0042127 P regulation of cell population proliferation
GO:0042332 P gravitaxis
GO:0042734 C presynaptic membrane
GO:0043113 P receptor clustering
GO:0043195 C terminal bouton
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045175 P basal protein localization
GO:0045179 C apical cortex
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045475 P locomotor rhythm
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046037 P GMP metabolic process
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0046710 P GDP metabolic process
GO:0046956 P positive phototaxis
GO:0048471 C perinuclear region of cytoplasm
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0051294 P establishment of spindle orientation
GO:0051726 P regulation of cell cycle
GO:0060581 P cell fate commitment involved in pattern specification
GO:0061174 C type I terminal bouton
GO:0061176 C type Ib terminal bouton
GO:0097120 P receptor localization to synapse
4867 O_BomoASG14381_complete:A_BomoASG_c28616_g1_i5
150bp
4868 O_BomoASG14382_complete:A_BomoASG_c28616_g1_i5
110bp
4869 O_BomoASG14383_complete:A_BomoASG_c28616_g1_i6
734bp
 LOW_QUALITY_PROTEIN:_disks_large_1_tumor_suppressor_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000132 P establishment of mitotic spindle orientation
GO:0001708 P cell fate specification
GO:0001738 P morphogenesis of a polarized epithelium
GO:0002009 P morphogenesis of an epithelium
GO:0004385 F guanylate kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005154 F epidermal growth factor receptor binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0005920 C smooth septate junction
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007268 P chemical synaptic transmission
GO:0007275 P multicellular organism development
GO:0007318 P pole plasm protein localization
GO:0007391 P dorsal closure
GO:0007399 P nervous system development
GO:0007617 P mating behavior
GO:0008049 P male courtship behavior
GO:0008104 P protein localization
GO:0008105 P protein localization
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0008328 C ionotropic glutamate receptor complex
GO:0008593 P regulation of Notch signaling pathway
GO:0010906 P regulation of glucose metabolic process
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0016335 P morphogenesis of larval imaginal disc epithelium
GO:0016336 P establishment or maintenance of polarity of larval imaginal disc epithelium
GO:0019233 P sensory perception of pain
GO:0019991 P septate junction assembly
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0030710 P regulation of border follicle cell delamination
GO:0030714 P anterior/posterior axis specification, follicular epithelium
GO:0031594 C neuromuscular junction
GO:0035255 F ionotropic glutamate receptor binding
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0042127 P regulation of cell population proliferation
GO:0042332 P gravitaxis
GO:0042734 C presynaptic membrane
GO:0043113 P receptor clustering
GO:0043195 C terminal bouton
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045175 P basal protein localization
GO:0045179 C apical cortex
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045475 P locomotor rhythm
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046037 P GMP metabolic process
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0046710 P GDP metabolic process
GO:0046956 P positive phototaxis
GO:0048471 C perinuclear region of cytoplasm
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0051294 P establishment of spindle orientation
GO:0051726 P regulation of cell cycle
GO:0060581 P cell fate commitment involved in pattern specification
GO:0061174 C type I terminal bouton
GO:0061176 C type Ib terminal bouton
GO:0097120 P receptor localization to synapse
4870 O_BomoASG14384_complete:A_BomoASG_c28616_g1_i6
136bp
4871 O_BomoASG14385_complete:A_BomoASG_c28616_g1_i6
110bp
4872 O_BomoASG14386_internal:A_BomoASG_c28617_g1_i1
229bp
 zinc_finger_MYM-type_protein_4_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0022604 P regulation of cell morphogenesis
GO:0046872 F metal ion binding
4873 O_BomoASG14387_5prime_partial:A_BomoASG_c28617_g1_i1
106bp
4874 O_BomoASG14388_5prime_partial:A_BomoASG_c28619_g1_i1
105bp
 uncharacterized_protein_LOC101742205_[Bombyx_mori]
4875 O_BomoASG14389_internal:A_BomoASG_c28619_g2_i1
123bp
 uncharacterized_protein_LOC101742205_[Bombyx_mori]
4876 O_BomoASG1438_complete:A_BomoASG_c8963_g1_i1
134bp
 uncharacterized_protein_LOC101736794_isoform_X1_[Bombyx_mori]
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005634 C nucleus
GO:0006401 P RNA catabolic process
GO:0032299 C ribonuclease H2 complex
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
4877 O_BomoASG14390_5prime_partial:A_BomoASG_c28619_g1_i2
217bp
 uncharacterized_protein_LOC101742205_[Bombyx_mori]
4878 O_BomoASG14391_complete:A_BomoASG_c28621_g1_i1
262bp
 protein_hairy_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000902 P cell morphogenesis
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007366 P periodic partitioning by pair rule gene
GO:0007399 P nervous system development
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007460 P R8 cell fate commitment
GO:0008134 F transcription factor binding
GO:0008407 P chaeta morphogenesis
GO:0031323 P regulation of cellular metabolic process
GO:0035239 P tube morphogenesis
GO:0035289 P posterior head segmentation
GO:0035290 P trunk segmentation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046983 F protein dimerization activity
GO:0061024 P membrane organization
GO:0070888 F E-box binding
4879 O_BomoASG14392_3prime_partial:A_BomoASG_c28622_g1_i1
254bp
 cell_cycle_checkpoint_protein_RAD1_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0003684 F damaged DNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008408 F 3'-5' exonuclease activity
GO:0008853 F exodeoxyribonuclease III activity
GO:0016787 F hydrolase activity
GO:0021762 P substantia nigra development
GO:0030896 C checkpoint clamp complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0051598 P meiotic recombination checkpoint signaling
GO:0071479 P cellular response to ionizing radiation
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4880 O_BomoASG14393_5prime_partial:A_BomoASG_c28622_g1_i1
144bp
 PREDICTED:_zinc_finger_SWIM_domain-containing_protein_7-like_[Amyelois_transitella]
GO:0000724 P double-strand break repair via homologous recombination
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
4881 O_BomoASG14394_3prime_partial:A_BomoASG_c28622_g1_i2
254bp
 cell_cycle_checkpoint_protein_RAD1_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0003684 F damaged DNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008408 F 3'-5' exonuclease activity
GO:0008853 F exodeoxyribonuclease III activity
GO:0016787 F hydrolase activity
GO:0021762 P substantia nigra development
GO:0030896 C checkpoint clamp complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0051598 P meiotic recombination checkpoint signaling
GO:0071479 P cellular response to ionizing radiation
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4882 O_BomoASG14395_5prime_partial:A_BomoASG_c28622_g1_i2
127bp
 PREDICTED:_zinc_finger_SWIM_domain-containing_protein_7-like_[Amyelois_transitella]
GO:0000724 P double-strand break repair via homologous recombination
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
4883 O_BomoASG14396_complete:A_BomoASG_c28623_g2_i1
474bp
 DNA-binding_protein_Ikaros_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0007498 P mesoderm development
GO:0016568 P chromatin organization
GO:0030098 P lymphocyte differentiation
GO:0030218 P erythrocyte differentiation
GO:0043234 C protein-containing complex
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
4884 O_BomoASG14397_complete:A_BomoASG_c28623_g2_i1
163bp
4885 O_BomoASG14398_complete:A_BomoASG_c28623_g2_i1
117bp
4886 O_BomoASG14399_5prime_partial:A_BomoASG_c28623_g2_i2
448bp
 DNA-binding_protein_Ikaros_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0007498 P mesoderm development
GO:0016568 P chromatin organization
GO:0030098 P lymphocyte differentiation
GO:0030218 P erythrocyte differentiation
GO:0043234 C protein-containing complex
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
4887 O_BomoASG1439_3prime_partial:A_BomoASG_c8965_g1_i1
129bp
 ATP-dependent_helicase_[Bombyx_mori]
4888 O_BomoASG143_complete:A_BomoASG_c1110_g1_i1
131bp
4889 O_BomoASG14400_complete:A_BomoASG_c28623_g2_i2
163bp
4890 O_BomoASG14401_5prime_partial:A_BomoASG_c28624_g1_i1
147bp
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