SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/32479
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4471 O_BomoASG14024_complete:A_BomoASG_c28480_g1_i2
233bp
 serine_hydrolase-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016023 C cytoplasmic vesicle
GO:0016787 F hydrolase activity
GO:0048471 C perinuclear region of cytoplasm
4472 O_BomoASG14025_complete:A_BomoASG_c28482_g1_i1
617bp
 tyrosine_kinase_receptor_Cad96Ca_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007030 P Golgi organization
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042060 P wound healing
GO:0045177 C apical part of cell
GO:0045792 P negative regulation of cell size
GO:0090303 P positive regulation of wound healing
4473 O_BomoASG14026_complete:A_BomoASG_c28482_g1_i1
131bp
4474 O_BomoASG14027_complete:A_BomoASG_c28482_g1_i2
617bp
 tyrosine_kinase_receptor_Cad96Ca_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007030 P Golgi organization
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042060 P wound healing
GO:0045177 C apical part of cell
GO:0045792 P negative regulation of cell size
GO:0090303 P positive regulation of wound healing
4475 O_BomoASG14028_complete:A_BomoASG_c28482_g1_i2
131bp
4476 O_BomoASG14029_complete:A_BomoASG_c28482_g1_i3
581bp
 tyrosine_kinase_receptor_Cad96Ca_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007030 P Golgi organization
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0042060 P wound healing
GO:0045177 C apical part of cell
GO:0045792 P negative regulation of cell size
GO:0090303 P positive regulation of wound healing
4477 O_BomoASG1402_internal:A_BomoASG_c8639_g1_i1
100bp
4478 O_BomoASG14030_internal:A_BomoASG_c28485_g1_i1
384bp
 iduronate_2-sulfatase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004423 F iduronate-2-sulfatase activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016787 F hydrolase activity
GO:0030207 P chondroitin sulfate catabolic process
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
4479 O_BomoASG14031_internal:A_BomoASG_c28485_g1_i2
458bp
 iduronate_2-sulfatase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004423 F iduronate-2-sulfatase activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016787 F hydrolase activity
GO:0030207 P chondroitin sulfate catabolic process
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
4480 O_BomoASG14032_5prime_partial:A_BomoASG_c28487_g1_i1
903bp
 uncharacterized_protein_LOC101742598_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0042803 F protein homodimerization activity
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
4481 O_BomoASG14033_5prime_partial:A_BomoASG_c28487_g1_i2
543bp
 uncharacterized_protein_LOC101742598_isoform_X1_[Bombyx_mori]
4482 O_BomoASG14034_complete:A_BomoASG_c28487_g1_i3
901bp
 RE1-silencing_transcription_factor_isoform_X4_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001764 P neuron migration
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0010629 P negative regulation of gene expression
GO:0021610 P facial nerve morphogenesis
GO:0021785 P branchiomotor neuron axon guidance
GO:0022008 P neurogenesis
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
4483 O_BomoASG14035_complete:A_BomoASG_c28487_g1_i4
844bp
 uncharacterized_protein_LOC101742598_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0042803 F protein homodimerization activity
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
4484 O_BomoASG14036_internal:A_BomoASG_c28488_g1_i1
605bp
 rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001505 P regulation of neurotransmitter levels
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007266 P Rho protein signal transduction
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
4485 O_BomoASG14037_5prime_partial:A_BomoASG_c28488_g1_i1
192bp
4486 O_BomoASG14038_5prime_partial:A_BomoASG_c28488_g1_i1
173bp
4487 O_BomoASG14039_complete:A_BomoASG_c28488_g1_i1
154bp
4488 O_BomoASG1403_internal:A_BomoASG_c8647_g1_i1
282bp
 rootletin_[Bombyx_mori]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
4489 O_BomoASG14040_complete:A_BomoASG_c28488_g1_i1
151bp
4490 O_BomoASG14041_internal:A_BomoASG_c28488_g1_i2
941bp
 rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
4491 O_BomoASG14042_complete:A_BomoASG_c28488_g1_i2
408bp
4492 O_BomoASG14043_5prime_partial:A_BomoASG_c28488_g1_i2
173bp
4493 O_BomoASG14044_5prime_partial:A_BomoASG_c28488_g1_i2
166bp
4494 O_BomoASG14045_complete:A_BomoASG_c28488_g1_i2
154bp
4495 O_BomoASG14046_5prime_partial:A_BomoASG_c28488_g1_i2
100bp
4496 O_BomoASG14047_internal:A_BomoASG_c28488_g1_i3
193bp
 rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000226 P microtubule cytoskeleton organization
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0006954 P inflammatory response
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007616 P long-term memory
GO:0008284 P positive regulation of cell population proliferation
GO:0008286 P insulin receptor signaling pathway
GO:0015459 F potassium channel regulator activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016324 C apical plasma membrane
GO:0016363 C nuclear matrix
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0030010 P establishment of cell polarity
GO:0030054 C cell junction
GO:0030168 P platelet activation
GO:0031252 C cell leading edge
GO:0031333 P negative regulation of protein-containing complex assembly
GO:0031532 P actin cytoskeleton reorganization
GO:0031584 P activation of phospholipase D activity
GO:0031941 C filamentous actin
GO:0031982 C vesicle
GO:0032148 P activation of protein kinase B activity
GO:0032753 P positive regulation of interleukin-4 production
GO:0032869 P cellular response to insulin stimulus
GO:0034613 P cellular protein localization
GO:0035556 P intracellular signal transduction
GO:0035748 C myelin sheath abaxonal region
GO:0043066 P negative regulation of apoptotic process
GO:0043203 C axon hillock
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043274 F phospholipase binding
GO:0045121 C membrane raft
GO:0045179 C apical cortex
GO:0045630 P positive regulation of T-helper 2 cell differentiation
GO:0046326 P positive regulation of glucose import
GO:0046627 P negative regulation of insulin receptor signaling pathway
GO:0046628 P positive regulation of insulin receptor signaling pathway
GO:0046872 F metal ion binding
GO:0047496 P vesicle transport along microtubule
GO:0048471 C perinuclear region of cytoplasm
GO:0050732 P negative regulation of peptidyl-tyrosine phosphorylation
GO:0050806 P positive regulation of synaptic transmission
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051222 P positive regulation of protein transport
GO:0051291 P protein heterooligomerization
GO:0051346 P negative regulation of hydrolase activity
GO:0051899 P membrane depolarization
GO:0060081 P membrane hyperpolarization
GO:0060291 P long-term synaptic potentiation
GO:0070062 C extracellular exosome
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0070528 P protein kinase C signaling
GO:0071889 F 14-3-3 protein binding
GO:0072659 P protein localization to plasma membrane
GO:1990138 P neuron projection extension
GO:2000463 P positive regulation of excitatory postsynaptic potential
GO:2000553 P positive regulation of T-helper 2 cell cytokine production
GO:2000664 P positive regulation of interleukin-5 production
GO:2000667 P positive regulation of interleukin-13 production
GO:2001181 P positive regulation of interleukin-10 production
4497 O_BomoASG14048_5prime_partial:A_BomoASG_c28488_g1_i3
173bp
4498 O_BomoASG14049_3prime_partial:A_BomoASG_c28488_g1_i4
1116bp
 uncharacterized_protein_LOC110379761_isoform_X1_[Helicoverpa_armigera]
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0070062 C extracellular exosome
4499 O_BomoASG1404_complete:A_BomoASG_c8652_g1_i1
155bp
 uncharacterized_protein_LOC101745663_[Bombyx_mori]
4500 O_BomoASG14050_complete:A_BomoASG_c28488_g1_i4
408bp
previous next from show/32479

- SilkBase 1999-2023 -