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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3751 O_BomoASG13377_5prime_partial:A_BomoASG_c28183_g1_i2
150bp
 toll-like_receptor_6_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0002229 P defense response to oomycetes
GO:0002376 P immune system process
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007416 P synapse assembly
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0009617 P response to bacterium
GO:0009620 P response to fungus
GO:0009880 P embryonic pattern specification
GO:0009897 C external side of plasma membrane
GO:0009950 P dorsal/ventral axis specification
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016201 P synaptic target inhibition
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0019955 F cytokine binding
GO:0030097 P hemopoiesis
GO:0032154 C cleavage furrow
GO:0035007 P regulation of melanization defense response
GO:0035172 P hemocyte proliferation
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045087 P innate immune response
GO:0045610 P regulation of hemocyte differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
GO:0070976 F TIR domain binding
GO:1902875 P regulation of embryonic pattern specification
3752 O_BomoASG13378_5prime_partial:A_BomoASG_c28183_g1_i2
138bp
3753 O_BomoASG13379_internal:A_BomoASG_c28184_g1_i1
343bp
 uncharacterized_protein_LOC101741823_isoform_X1_[Bombyx_mori]
3754 O_BomoASG1337_5prime_partial:A_BomoASG_c8093_g1_i1
127bp
 tumor_suppressor_candidate_3_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008250 C oligosaccharyltransferase complex
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050890 P cognition
GO:1903830 P magnesium ion transmembrane transport
3755 O_BomoASG13380_complete:A_BomoASG_c28184_g1_i1
106bp
3756 O_BomoASG13381_internal:A_BomoASG_c28184_g1_i2
671bp
 abnormal_cell_migration_protein_10_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0016020 C membrane
3757 O_BomoASG13382_complete:A_BomoASG_c28184_g1_i2
116bp
3758 O_BomoASG13383_complete:A_BomoASG_c28184_g1_i2
106bp
3759 O_BomoASG13384_complete:A_BomoASG_c28185_g1_i1
218bp
 trafficking_protein_particle_complex_subunit_4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005801 C cis-Golgi network
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0016358 P dendrite development
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045212 P obsolete neurotransmitter receptor biosynthetic process
3760 O_BomoASG13385_3prime_partial:A_BomoASG_c28186_g1_i1
862bp
 probable_DNA_mismatch_repair_protein_Msh6_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000400 F four-way junction DNA binding
GO:0000710 P meiotic mismatch repair
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006301 P postreplication repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009411 P response to UV
GO:0030983 F mismatched DNA binding
GO:0032137 F guanine/thymine mispair binding
GO:0032138 F single base insertion or deletion binding
GO:0032301 C MutSalpha complex
GO:0043570 P maintenance of DNA repeat elements
GO:0045910 P negative regulation of DNA recombination
3761 O_BomoASG13386_complete:A_BomoASG_c28187_g1_i1
918bp
 glutamyl_aminopeptidase-like_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0002003 P angiotensin maturation
GO:0002005 P angiotensin maturation
GO:0003081 P regulation of systemic arterial blood pressure by renin-angiotensin
GO:0004177 F aminopeptidase activity
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005903 C brush border
GO:0006508 P proteolysis
GO:0007267 P cell-cell signaling
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0009897 C external side of plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016477 P cell migration
GO:0016787 F hydrolase activity
GO:0031410 C cytoplasmic vesicle
GO:0032835 P glomerulus development
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
GO:0070062 C extracellular exosome
3762 O_BomoASG13387_complete:A_BomoASG_c28189_g1_i1
446bp
 nuclear_RNA_export_factor_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0042272 C nuclear RNA export factor complex
GO:0044822 F RNA binding
GO:0050658 P RNA transport
GO:0051028 P mRNA transport
3763 O_BomoASG13388_complete:A_BomoASG_c28191_g1_i2
702bp
 mitochondrial_intermediate_peptidase_isoform_X2_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006508 P proteolysis
GO:0006518 P peptide metabolic process
GO:0006627 P protein processing involved in protein targeting to mitochondrion
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3764 O_BomoASG13389_5prime_partial:A_BomoASG_c28191_g1_i3
722bp
 mitochondrial_intermediate_peptidase_isoform_X2_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006508 P proteolysis
GO:0006518 P peptide metabolic process
GO:0006627 P protein processing involved in protein targeting to mitochondrion
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3765 O_BomoASG1338_complete:A_BomoASG_c8095_g1_i1
537bp
 sterol_carrier_protein_x_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0033814 F propanoyl-CoA C-acyltransferase activity
3766 O_BomoASG13390_complete:A_BomoASG_c28191_g1_i4
699bp
 mitochondrial_intermediate_peptidase_isoform_X1_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3767 O_BomoASG13391_complete:A_BomoASG_c28191_g1_i5
699bp
 mitochondrial_intermediate_peptidase_isoform_X1_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3768 O_BomoASG13392_3prime_partial:A_BomoASG_c28193_g1_i1
175bp
 kanadaptin_isoform_X2_[Bombyx_mori]
3769 O_BomoASG13393_5prime_partial:A_BomoASG_c28193_g1_i1
123bp
3770 O_BomoASG13394_complete:A_BomoASG_c28193_g1_i2
499bp
 kanadaptin_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0043231 C intracellular membrane-bounded organelle
3771 O_BomoASG13395_3prime_partial:A_BomoASG_c28193_g1_i3
655bp
 kanadaptin_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0043231 C intracellular membrane-bounded organelle
3772 O_BomoASG13396_5prime_partial:A_BomoASG_c28193_g1_i3
123bp
3773 O_BomoASG13397_3prime_partial:A_BomoASG_c28193_g1_i4
435bp
 kanadaptin_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0043231 C intracellular membrane-bounded organelle
3774 O_BomoASG13398_complete:A_BomoASG_c28193_g1_i4
147bp
 kanadaptin_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0043231 C intracellular membrane-bounded organelle
3775 O_BomoASG13399_5prime_partial:A_BomoASG_c28193_g1_i4
123bp
3776 O_BomoASG1339_complete:A_BomoASG_c8095_g1_i2
147bp
 sterol_carrier_protein_x_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0006694 P steroid biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0015248 F sterol transporter activity
GO:0015914 P phospholipid transport
GO:0015918 P sterol transport
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0032385 P positive regulation of intracellular cholesterol transport
GO:0032934 F sterol binding
GO:0033814 F propanoyl-CoA C-acyltransferase activity
GO:1901373 P lipid hydroperoxide transport
3777 O_BomoASG133_5prime_partial:A_BomoASG_c903_g1_i1
109bp
3778 O_BomoASG13400_3prime_partial:A_BomoASG_c28194_g1_i1
209bp
 alpha-ketoglutarate-dependent_dioxygenase_alkB_homolog_6_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
3779 O_BomoASG13401_complete:A_BomoASG_c28195_g1_i1
245bp
 ociad_protein_isoform_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3780 O_BomoASG13402_complete:A_BomoASG_c28195_g1_i1
136bp
 cycle-like_factor_BmCyc_[Bombyx_mori]
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