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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3481 O_BomoASG13133_internal:A_BomoASG_c28057_g1_i1
377bp
 sorting_nexin-25_[Helicoverpa_armigera]
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
3482 O_BomoASG13134_3prime_partial:A_BomoASG_c28057_g1_i2
482bp
 sorting_nexin-25_[Helicoverpa_armigera]
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
3483 O_BomoASG13135_internal:A_BomoASG_c28057_g1_i3
351bp
 sorting_nexin-25_isoform_X1_[Bombyx_mori]
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
3484 O_BomoASG13136_internal:A_BomoASG_c28057_g1_i4
451bp
 sorting_nexin-25_[Helicoverpa_armigera]
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
3485 O_BomoASG13137_5prime_partial:A_BomoASG_c28058_g1_i1
126bp
 uncharacterized_protein_LOC101743487_[Bombyx_mori]
GO:0005515 F protein binding
GO:0008057 P eye pigment granule organization
GO:0019898 C extrinsic component of membrane
GO:0030133 C transport vesicle
GO:0031083 C BLOC-1 complex
GO:0046907 P intracellular transport
3486 O_BomoASG13138_3prime_partial:A_BomoASG_c28059_g1_i1
537bp
 zinc_finger_protein_2_[Bombyx_mori]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3487 O_BomoASG13139_5prime_partial:A_BomoASG_c28059_g1_i1
350bp
3488 O_BomoASG1313_internal:A_BomoASG_c7869_g1_i1
131bp
 synaptic_vesicle_glycoprotein_2B_[Bombyx_mori]
GO:0001504 P neurotransmitter uptake
GO:0001669 C acrosomal vesicle
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043195 C terminal bouton
GO:0045202 C synapse
GO:0055085 P transmembrane transport
3489 O_BomoASG13140_complete:A_BomoASG_c28060_g1_i1
396bp
 traB_domain-containing_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3490 O_BomoASG13141_5prime_partial:A_BomoASG_c28060_g1_i2
443bp
 traB_domain-containing_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3491 O_BomoASG13142_3prime_partial:A_BomoASG_c28061_g1_i1
416bp
 uncharacterized_protein_LOC110385166_[Bombyx_mori]
GO:0046872 F metal ion binding
3492 O_BomoASG13143_internal:A_BomoASG_c28062_g1_i1
697bp
 uncharacterized_protein_LOC110381285_isoform_X3_[Helicoverpa_armigera]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
3493 O_BomoASG13144_complete:A_BomoASG_c28062_g1_i1
100bp
3494 O_BomoASG13145_internal:A_BomoASG_c28062_g1_i2
417bp
 uncharacterized_protein_LOC110381285_isoform_X1_[Helicoverpa_armigera]
GO:0000003 P reproduction
GO:0001764 P neuron migration
GO:0005604 C basement membrane
GO:0007155 P cell adhesion
GO:0007414 P axonal defasciculation
GO:0009408 P response to heat
GO:0010950 P positive regulation of endopeptidase activity
GO:0016477 P cell migration
GO:0040017 P positive regulation of locomotion
GO:0042127 P regulation of cell population proliferation
GO:0051788 P response to misfolded protein
GO:0071711 P basement membrane organization
3495 O_BomoASG13146_complete:A_BomoASG_c28062_g1_i2
100bp
3496 O_BomoASG13147_complete:A_BomoASG_c28066_g1_i1
239bp
 4-coumarate--CoA_ligase_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
3497 O_BomoASG13148_5prime_partial:A_BomoASG_c28066_g1_i1
234bp
 probable_4-coumarate--CoA_ligase_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
3498 O_BomoASG13149_complete:A_BomoASG_c28066_g1_i2
509bp
 4-coumarate--CoA_ligase_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
3499 O_BomoASG1314_5prime_partial:A_BomoASG_c7883_g1_i1
103bp
 PREDICTED:_longitudinals_lacking_protein,_isoform_G_isoform_X5_[Papilio_polytes]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
3500 O_BomoASG13150_5prime_partial:A_BomoASG_c28066_g1_i4
544bp
 probable_4-coumarate--CoA_ligase_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
3501 O_BomoASG13151_complete:A_BomoASG_c28066_g1_i5
103bp
 probable_4-coumarate--CoA_ligase_1_isoform_X1_[Bombyx_mori]
3502 O_BomoASG13152_complete:A_BomoASG_c28066_g1_i6
592bp
 probable_4-coumarate--CoA_ligase_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
3503 O_BomoASG13153_complete:A_BomoASG_c28066_g1_i8
495bp
 probable_4-coumarate--CoA_ligase_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0009698 P phenylpropanoid metabolic process
GO:0016207 F 4-coumarate-CoA ligase activity
GO:0016874 F ligase activity
3504 O_BomoASG13154_complete:A_BomoASG_c28068_g1_i1
140bp
 trafficking_protein_particle_complex_subunit_2_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0048471 C perinuclear region of cytoplasm
3505 O_BomoASG13155_complete:A_BomoASG_c28068_g1_i2
140bp
 trafficking_protein_particle_complex_subunit_2_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0048471 C perinuclear region of cytoplasm
3506 O_BomoASG13156_5prime_partial:A_BomoASG_c28068_g2_i1
115bp
 uncharacterized_protein_LOC101741558_[Bombyx_mori]
3507 O_BomoASG13157_internal:A_BomoASG_c28069_g1_i1
210bp
 leucine-rich_repeat_and_calponin_homology_domain-containing_protein_1-like,_partial_[Bombyx_mori]
3508 O_BomoASG13158_internal:A_BomoASG_c28069_g1_i2
275bp
 leucine-rich_repeat_and_calponin_homology_domain-containing_protein_1-like,_partial_[Bombyx_mori]
3509 O_BomoASG13159_5prime_partial:A_BomoASG_c28069_g1_i2
156bp
3510 O_BomoASG1315_internal:A_BomoASG_c7885_g1_i1
99bp
 ubiquitin-protein_ligase_E3B_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
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