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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3421 O_BomoASG1307_internal:A_BomoASG_c7860_g1_i1
161bp
 PREDICTED:_uncharacterized_protein_LOC106142263_[Amyelois_transitella]
3422 O_BomoASG13080_5prime_partial:A_BomoASG_c28033_g1_i2
121bp
3423 O_BomoASG13081_internal:A_BomoASG_c28033_g2_i1
113bp
 PREDICTED:_AF4/FMR2_family_member_3_[Papilio_machaon]
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007286 P spermatid development
GO:0008023 C transcription elongation factor complex
GO:0035327 C euchromatin
3424 O_BomoASG13082_internal:A_BomoASG_c28034_g1_i1
729bp
 myb-like_protein_X_[Bombyx_mori]
3425 O_BomoASG13083_complete:A_BomoASG_c28034_g1_i1
163bp
3426 O_BomoASG13084_3prime_partial:A_BomoASG_c28034_g1_i1
141bp
3427 O_BomoASG13085_complete:A_BomoASG_c28034_g1_i1
118bp
3428 O_BomoASG13086_internal:A_BomoASG_c28034_g1_i2
318bp
 myb-like_protein_X_[Bombyx_mori]
3429 O_BomoASG13087_complete:A_BomoASG_c28034_g1_i2
163bp
3430 O_BomoASG13088_3prime_partial:A_BomoASG_c28034_g1_i2
141bp
3431 O_BomoASG13089_5prime_partial:A_BomoASG_c28035_g1_i1
110bp
3432 O_BomoASG1308_internal:A_BomoASG_c7862_g1_i1
103bp
 LOW_QUALITY_PROTEIN:_collagen_alpha-1(I)_chain_[Bombyx_mori]
GO:0001507 P acetylcholine catabolic process in synaptic cleft
GO:0005515 F protein binding
GO:0005581 C collagen trimer
GO:0005605 C basement membrane
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0008105 P protein localization
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0030054 C cell junction
GO:0031594 C neuromuscular junction
GO:0042135 P neurotransmitter catabolic process
GO:0043083 C synaptic cleft
GO:0045202 C synapse
GO:0071340 P skeletal muscle acetylcholine-gated channel clustering
GO:0090150 P establishment of protein localization to membrane
3433 O_BomoASG13090_3prime_partial:A_BomoASG_c28037_g1_i1
355bp
 major_facilitator_superfamily_domain-containing_protein_8_isoform_X1_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
3434 O_BomoASG13091_3prime_partial:A_BomoASG_c28037_g1_i2
344bp
 major_facilitator_superfamily_domain-containing_protein_8_isoform_X2_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
3435 O_BomoASG13092_internal:A_BomoASG_c28039_g1_i1
521bp
 gamma-tubulin_complex_component_4_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0000923 C equatorial microtubule organizing center
GO:0000930 C gamma-tubulin complex
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005816 C spindle pole body
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006461 P protein-containing complex assembly
GO:0007020 P microtubule nucleation
GO:0007126 P meiotic cell cycle
GO:0008274 C gamma-tubulin large complex
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0031122 P cytoplasmic microtubule organization
GO:0043015 F gamma-tubulin binding
GO:0044732 C mitotic spindle pole body
GO:0051011 F microtubule minus-end binding
GO:0051298 P centrosome duplication
GO:0051415 P microtubule nucleation by interphase microtubule organizing center
GO:0055037 C recycling endosome
GO:0090063 P positive regulation of microtubule nucleation
GO:0090307 P mitotic spindle assembly
3436 O_BomoASG13093_internal:A_BomoASG_c28040_g1_i1
329bp
 LOW_QUALITY_PROTEIN:_trithorax_group_protein_osa_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001104 F transcription coregulator activity
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006298 P mismatch repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008263 F pyrimidine-specific mismatch base pair DNA N-glycosylase activity
GO:0009790 P embryo development
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016799 F hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0016925 P protein sumoylation
GO:0019104 F DNA N-glycosylase activity
GO:0030983 F mismatched DNA binding
GO:0032091 P negative regulation of protein binding
GO:0032183 F SUMO binding
GO:0035511 P oxidative DNA demethylation
GO:0035562 P negative regulation of chromatin binding
GO:0040029 P regulation of gene expression, epigenetic
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0045008 P depyrimidination
GO:0080111 P DNA demethylation
3437 O_BomoASG13094_internal:A_BomoASG_c28044_g1_i1
485bp
 oviduct-specific_glycoprotein_[Bombyx_mori]
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0006030 P chitin metabolic process
GO:0006032 P chitin catabolic process
GO:0006955 P immune response
GO:0008061 F chitin binding
GO:0008152 P metabolic process
GO:0008843 F endochitinase activity
GO:0009617 P response to bacterium
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
3438 O_BomoASG13095_complete:A_BomoASG_c28044_g1_i1
134bp
3439 O_BomoASG13096_3prime_partial:A_BomoASG_c28044_g1_i1
106bp
3440 O_BomoASG13097_internal:A_BomoASG_c28044_g1_i2
313bp
 oviduct-specific_glycoprotein_[Bombyx_mori]
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0006030 P chitin metabolic process
GO:0006032 P chitin catabolic process
GO:0008061 F chitin binding
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
3441 O_BomoASG13098_3prime_partial:A_BomoASG_c28044_g1_i2
106bp
3442 O_BomoASG13099_internal:A_BomoASG_c28044_g1_i3
242bp
 oviduct-specific_glycoprotein_[Bombyx_mori]
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0006030 P chitin metabolic process
GO:0006032 P chitin catabolic process
GO:0008061 F chitin binding
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
3443 O_BomoASG1309_3prime_partial:A_BomoASG_c7864_g1_i1
208bp
 golgin_IMH1_[Bombyx_mori]
3444 O_BomoASG130_5prime_partial:A_BomoASG_c885_g1_i1
113bp
 polyhomeotic_[Bombyx_mori]
3445 O_BomoASG13100_3prime_partial:A_BomoASG_c28044_g1_i3
106bp
3446 O_BomoASG13101_3prime_partial:A_BomoASG_c28045_g1_i1
603bp
 calpain-11_[Bombyx_mori]
GO:0001669 C acrosomal vesicle
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0031410 C cytoplasmic vesicle
GO:0046872 F metal ion binding
3447 O_BomoASG13102_5prime_partial:A_BomoASG_c28045_g1_i1
157bp
3448 O_BomoASG13103_complete:A_BomoASG_c28045_g1_i1
130bp
3449 O_BomoASG13104_complete:A_BomoASG_c28045_g1_i1
125bp
3450 O_BomoASG13105_internal:A_BomoASG_c28045_g1_i2
194bp
 calpain-11_[Bombyx_mori]
GO:0001669 C acrosomal vesicle
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0031410 C cytoplasmic vesicle
GO:0046872 F metal ion binding
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