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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2851 O_BomoASG12567_internal:A_BomoASG_c27698_g1_i1
221bp
2852 O_BomoASG12568_internal:A_BomoASG_c27698_g1_i1
220bp
 1-phosphatidylinositol_3-phosphate_5-kinase_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0000285 F 1-phosphatidylinositol-3-phosphate 5-kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016308 F 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032288 P myelin assembly
GO:0032593 C insulin-responsive compartment
GO:0034504 P protein localization to nucleus
GO:0035556 P intracellular signal transduction
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045121 C membrane raft
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0052810 F 1-phosphatidylinositol-5-kinase activity
GO:2000785 P regulation of autophagosome assembly
2853 O_BomoASG12569_internal:A_BomoASG_c27698_g1_i2
524bp
 1-phosphatidylinositol_3-phosphate_5-kinase_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0000285 F 1-phosphatidylinositol-3-phosphate 5-kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016308 F 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032288 P myelin assembly
GO:0032593 C insulin-responsive compartment
GO:0034504 P protein localization to nucleus
GO:0035556 P intracellular signal transduction
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045121 C membrane raft
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0052810 F 1-phosphatidylinositol-5-kinase activity
GO:2000785 P regulation of autophagosome assembly
2854 O_BomoASG1256_complete:A_BomoASG_c7544_g1_i1
100bp
2855 O_BomoASG12570_5prime_partial:A_BomoASG_c27698_g1_i2
191bp
2856 O_BomoASG12571_5prime_partial:A_BomoASG_c27700_g1_i1
124bp
2857 O_BomoASG12572_5prime_partial:A_BomoASG_c27700_g1_i2
124bp
2858 O_BomoASG12573_internal:A_BomoASG_c27704_g1_i1
246bp
 protein_king_tubby_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
2859 O_BomoASG12574_internal:A_BomoASG_c27704_g1_i2
297bp
 protein_king_tubby_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
2860 O_BomoASG12575_3prime_partial:A_BomoASG_c27704_g1_i3
326bp
 protein_king_tubby_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
2861 O_BomoASG12576_internal:A_BomoASG_c27705_g1_i1
396bp
 protein_disks_lost_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006325 P chromatin organization
GO:0008104 P protein localization
GO:0008156 P negative regulation of DNA replication
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031497 P chromatin assembly
2862 O_BomoASG12577_5prime_partial:A_BomoASG_c27705_g1_i1
185bp
2863 O_BomoASG12578_5prime_partial:A_BomoASG_c27705_g1_i1
144bp
2864 O_BomoASG12579_5prime_partial:A_BomoASG_c27705_g1_i1
112bp
2865 O_BomoASG1257_internal:A_BomoASG_c7545_g1_i1
175bp
 uncharacterized_protein_LOC101738925_isoform_X2_[Bombyx_mori]
2866 O_BomoASG12580_3prime_partial:A_BomoASG_c27705_g1_i1
111bp
2867 O_BomoASG12581_5prime_partial:A_BomoASG_c27706_g1_i1
147bp
2868 O_BomoASG12582_5prime_partial:A_BomoASG_c27706_g1_i1
129bp
 spidroin-1_[Bombyx_mori]
2869 O_BomoASG12583_5prime_partial:A_BomoASG_c27706_g1_i1
100bp
 PREDICTED:_uncharacterized_protein_LOC105392190_[Plutella_xylostella]
2870 O_BomoASG12584_complete:A_BomoASG_c27708_g1_i1
183bp
 anaphase_promoting_complex_subunit_10_[Bombyx_mori]
GO:0005680 C anaphase-promoting complex
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007092 P positive regulation of ubiquitin protein ligase activity
GO:0007113 P endomitotic cell cycle
GO:0008054 P anaphase-promoting complex-dependent catabolic process
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0051301 P cell division
GO:0070979 P protein K11-linked ubiquitination
GO:0090302 F ubiquitin protein ligase activity
2871 O_BomoASG12585_complete:A_BomoASG_c27712_g1_i1
222bp
 exosome_complex_component_CSL4_[Bombyx_mori]
GO:0000176 C nuclear exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
2872 O_BomoASG12586_complete:A_BomoASG_c27712_g1_i1
134bp
2873 O_BomoASG12587_5prime_partial:A_BomoASG_c27712_g1_i2
182bp
 exosome_complex_component_CSL4_[Bombyx_mori]
GO:0000176 C nuclear exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
2874 O_BomoASG12588_3prime_partial:A_BomoASG_c27712_g1_i2
134bp
2875 O_BomoASG12589_3prime_partial:A_BomoASG_c27713_g1_i1
478bp
 hypothetical_protein_RR46_10186_[Papilio_xuthus]
2876 O_BomoASG1258_3prime_partial:A_BomoASG_c7555_g1_i1
105bp
 Uncharacterized_protein_OBRU01_25064_[Operophtera_brumata]
2877 O_BomoASG12590_complete:A_BomoASG_c27716_g1_i2
238bp
 28S_ribosomal_protein_S7,_mitochondrial_[Bombyx_mori]
GO:0000028 P ribosomal small subunit assembly
GO:0003729 F mRNA binding
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
2878 O_BomoASG12591_5prime_partial:A_BomoASG_c27719_g1_i1
106bp
2879 O_BomoASG12592_complete:A_BomoASG_c27721_g2_i1
1204bp
 structural_maintenance_of_chromosomes_protein_3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006275 P regulation of DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0008280 C cohesin complex
GO:0030893 C meiotic cohesin complex
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
2880 O_BomoASG12593_complete:A_BomoASG_c27721_g2_i1
102bp
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