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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2521 O_BomoASG1226_complete:A_BomoASG_c7349_g1_i1
623bp
 ATP-binding_cassette_sub-family_F_member_2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0043190 C ATP-binding cassette (ABC) transporter complex
2522 O_BomoASG12270_complete:A_BomoASG_c27497_g1_i1
110bp
2523 O_BomoASG12271_complete:A_BomoASG_c27498_g1_i1
194bp
 partner_of_Y14_and_mago_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0035145 C exon-exon junction complex
2524 O_BomoASG12272_3prime_partial:A_BomoASG_c27500_g1_i1
114bp
 uncharacterized_protein_LOC101736359_[Bombyx_mori]
2525 O_BomoASG12273_5prime_partial:A_BomoASG_c27501_g1_i1
382bp
 probable_ATP-dependent_RNA_helicase_Dbp45A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
2526 O_BomoASG12274_complete:A_BomoASG_c27501_g1_i1
115bp
2527 O_BomoASG12275_3prime_partial:A_BomoASG_c27502_g1_i1
264bp
 blastoderm-specific_protein_25D_[Helicoverpa_armigera]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0046872 F metal ion binding
2528 O_BomoASG12276_internal:A_BomoASG_c27502_g1_i2
277bp
 blastoderm-specific_protein_25D_[Helicoverpa_armigera]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0046872 F metal ion binding
2529 O_BomoASG12277_5prime_partial:A_BomoASG_c27503_g1_i1
407bp
 prostatic_acid_phosphatase_[Bombyx_mori]
GO:0001501 P skeletal system development
GO:0001784 F phosphotyrosine residue binding
GO:0003993 F acid phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006470 P protein dephosphorylation
GO:0007040 P lysosome organization
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0031410 C cytoplasmic vesicle
GO:0043005 C neuron projection
GO:0043202 C lysosomal lumen
GO:0048102 P autophagic cell death
GO:0070062 C extracellular exosome
2530 O_BomoASG12278_complete:A_BomoASG_c27503_g1_i2
403bp
 prostatic_acid_phosphatase_[Bombyx_mori]
GO:0001501 P skeletal system development
GO:0001784 F phosphotyrosine residue binding
GO:0003993 F acid phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006470 P protein dephosphorylation
GO:0007040 P lysosome organization
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0031410 C cytoplasmic vesicle
GO:0043005 C neuron projection
GO:0043202 C lysosomal lumen
GO:0048102 P autophagic cell death
GO:0070062 C extracellular exosome
2531 O_BomoASG12279_complete:A_BomoASG_c27504_g1_i1
361bp
 uncharacterized_protein_LOC101736099_[Bombyx_mori]
2532 O_BomoASG1227_complete:A_BomoASG_c7349_g1_i1
103bp
2533 O_BomoASG12280_5prime_partial:A_BomoASG_c27505_g1_i3
225bp
 PREDICTED:_PAX-interacting_protein_1_isoform_X2_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
2534 O_BomoASG12281_5prime_partial:A_BomoASG_c27509_g1_i1
248bp
 uncharacterized_protein_LOC101742398_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015129 F lactate transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032094 P response to food
GO:0035879 P plasma membrane lactate transport
GO:0042593 P glucose homeostasis
GO:0050796 P regulation of insulin secretion
GO:0051297 P centrosome cycle
GO:0051780 P behavioral response to nutrient
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
2535 O_BomoASG12282_complete:A_BomoASG_c27509_g1_i1
112bp
2536 O_BomoASG12283_complete:A_BomoASG_c27509_g1_i1
101bp
2537 O_BomoASG12284_complete:A_BomoASG_c27509_g1_i2
574bp
 uncharacterized_protein_LOC101742398_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2538 O_BomoASG12285_complete:A_BomoASG_c27509_g1_i2
112bp
2539 O_BomoASG12286_complete:A_BomoASG_c27509_g1_i2
101bp
2540 O_BomoASG12287_5prime_partial:A_BomoASG_c27513_g1_i1
161bp
 DNA_ligase_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005958 C DNA-dependent protein kinase-DNA ligase 4 complex
GO:0006260 P DNA replication
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0032807 C DNA ligase IV complex
GO:0033152 P immunoglobulin V(D)J recombination
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0070419 C nonhomologous end joining complex
GO:0071897 P DNA biosynthetic process
2541 O_BomoASG12288_5prime_partial:A_BomoASG_c27513_g1_i2
101bp
 DNA_ligase_4_[Bombyx_mori]
2542 O_BomoASG12289_internal:A_BomoASG_c27515_g1_i1
299bp
 F-box_only_protein_42_[Bombyx_mori]
GO:0005515 F protein binding
2543 O_BomoASG1228_complete:A_BomoASG_c7358_g1_i1
423bp
 sorting_nexin-6_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0007175 P negative regulation of epidermal growth factor-activated receptor activity
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016050 P vesicle organization
GO:0016241 P regulation of macroautophagy
GO:0019898 C extrinsic component of membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030904 C retromer complex
GO:0030905 C retromer, tubulation complex
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0034452 F dynactin binding
GO:0035091 F phosphatidylinositol binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046982 F protein heterodimerization activity
GO:0097422 C tubular endosome
GO:1903593 P regulation of histamine secretion by mast cell
2544 O_BomoASG12290_internal:A_BomoASG_c27515_g1_i2
140bp
 F-box_only_protein_42_[Bombyx_mori]
2545 O_BomoASG12291_internal:A_BomoASG_c27515_g1_i3
404bp
 F-box_only_protein_42_[Bombyx_mori]
2546 O_BomoASG12292_complete:A_BomoASG_c27515_g1_i3
123bp
2547 O_BomoASG12293_complete:A_BomoASG_c27516_g1_i1
265bp
 uncharacterized_protein_LOC767623_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001933 P negative regulation of protein phosphorylation
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
GO:0031333 P negative regulation of protein-containing complex assembly
GO:0031953 P negative regulation of protein autophosphorylation
GO:0034198 P cellular response to amino acid starvation
GO:0042149 P cellular response to glucose starvation
GO:0045666 P positive regulation of neuron differentiation
GO:0060548 P negative regulation of cell death
GO:0060733 P GCN2-mediated signaling
GO:0070301 P cellular response to hydrogen peroxide
GO:0071264 P positive regulation of translational initiation in response to starvation
GO:0071468 P cellular response to acidic pH
GO:0071494 P cellular response to UV-C
GO:0072755 P cellular response to benomyl
GO:0097201 P negative regulation of transcription from RNA polymerase II promoter in response to stress
GO:1990138 P neuron projection extension
GO:1990253 P cellular response to leucine starvation
2548 O_BomoASG12294_5prime_partial:A_BomoASG_c27516_g1_i2
238bp
 uncharacterized_protein_LOC767623_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001933 P negative regulation of protein phosphorylation
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
GO:0031333 P negative regulation of protein-containing complex assembly
GO:0031953 P negative regulation of protein autophosphorylation
GO:0034198 P cellular response to amino acid starvation
GO:0042149 P cellular response to glucose starvation
GO:0045666 P positive regulation of neuron differentiation
GO:0060548 P negative regulation of cell death
GO:0060733 P GCN2-mediated signaling
GO:0070301 P cellular response to hydrogen peroxide
GO:0071264 P positive regulation of translational initiation in response to starvation
GO:0071468 P cellular response to acidic pH
GO:0071494 P cellular response to UV-C
GO:0072755 P cellular response to benomyl
GO:0097201 P negative regulation of transcription from RNA polymerase II promoter in response to stress
GO:1990138 P neuron projection extension
GO:1990253 P cellular response to leucine starvation
2549 O_BomoASG12295_5prime_partial:A_BomoASG_c27516_g1_i3
212bp
 uncharacterized_protein_LOC767623_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001933 P negative regulation of protein phosphorylation
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
GO:0031333 P negative regulation of protein-containing complex assembly
GO:0031953 P negative regulation of protein autophosphorylation
GO:0034198 P cellular response to amino acid starvation
GO:0042149 P cellular response to glucose starvation
GO:0043022 F ribosome binding
GO:0045666 P positive regulation of neuron differentiation
GO:0060548 P negative regulation of cell death
GO:0060733 P GCN2-mediated signaling
GO:0070301 P cellular response to hydrogen peroxide
GO:0071264 P positive regulation of translational initiation in response to starvation
GO:0071468 P cellular response to acidic pH
GO:0071494 P cellular response to UV-C
GO:0072755 P cellular response to benomyl
GO:0097201 P negative regulation of transcription from RNA polymerase II promoter in response to stress
GO:1990138 P neuron projection extension
GO:1990253 P cellular response to leucine starvation
2550 O_BomoASG12296_internal:A_BomoASG_c27519_g1_i1
148bp
 zinc_finger_protein_628_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003712 F transcription coregulator activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
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